BAC Information

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BAC

Clone NameB6Ng01-213B11
Chromosome3 (Build37)
Map Location 67,799,046 - 67,799,836
singlet/doubletsinglet
Overlap geneEG208426
Upstream geneRsrc1, Mlf1, Gfm1, Lxn, Rarres1, Mfsd1, LOC667207, Gm412
Downstream geneEG545531, LOC631379, Schip1, Il12a, LOC639530, 1110032F04Rik, Ift80
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213B11.bB6Ng01-213B11.g
ACCGA030719GA030720
length8071,173
definitionB6Ng01-213B11.b B6Ng01-213B11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccagggaactgctgcactcttgcacacccacacaccacccaca
tcgcctgcctggaggtaacagcttttggcttttgttctggaccccatgcc
ctttaagtgtttactcttatatttcttgttcatgttgaatgcattcacat
catttcctaagctctctaatgatgtttttgccaattatgcttagagtgga
gaaagaatctctctcccgctgacctaagataggtgcagatgcttgtgttt
cagtcaggtttatcggaatcaaaggttgtttgaaagaaggagggagcaaa
taatccaaagactacagaaatggtttagaagacatgaaatgggggtgggg
tggagctatggagggggtaatagccatgaaaaatgacaggataagacaag
tgtcaagttcaatgtcaaacagggcagaattgatggaaagtggtatctga
gggatctcaattccaacctttgcttacttgtccatgcctccaggaagaga
tgaccagacttcccccactctccctcccatttcaatcagcttcacggttc
atatttttctctctacttaatgatttgcttatatacatgtggtaaatgta
tcaaagatataccttgctttttcaagtgggaagataaacctggtaccttt
aataagagaaaaatttaaaaaagaatgttggaaaataaacattttttctt
ttctttttaaacagcctggtgccttgggaaattggcttggattgtttgaa
aaagccaaatttagtttatcatataaagaatcaagccattagatgcagtt
tagtggg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaaagcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagaacaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaacttctccattgttggtgggatt
gcaagcttgtacaaccactctggaaatcagtctggcggttcctcagaaaa
ttggacatagtactactggaggatcccgcaatacctctcctgggcatata
tgcagaagatgttccaaccggtaagaaggacacatgctccactatgttca
tagcagccttatttataatagccagaagctggaaagaacccagatgcccc
tcaacagaggaatggatacagaaaatgtggtacatttacacaatggagta
ctactcagctattaaaaagcatgaatttatgaaattcctaggcaaatgga
tggacctggagggcatcatcctgagtgaggtaacccaatcacaaaagaac
tcacacaatacatactcactgataagtggatattggcccagaaatttaga
atacccaaaatataagatacaatttgctaaacacatgaaactcaagaaga
acgaagatcaaagtgtggacactttgccccttcttagaactgggaacaaa
acactcatggaaggagttacagagacaaattttggagctgagacaaaagg
attgaccatctagagactgccatatccggggatccataccataatcagct
tcccaaatgctgacaccattgcatacactagcaagattttgctgaaaagg
acccagatatggctgtctcttgtgagactatgccggggtctggcaacaca
gaagtgaatgctcacagtcagctattggatggatcacagggccccaatgg
aagagcttacagaaagtacccaaaggagctgaaggatcagcatcctaata
ggtggaacaacattatgaacttaacccaataccccaccccagctttggtg
tctctagctgcatatgaatcagaaggatggcctagttcgtcaatcactgc
aagagagctccatttgctcgtgctaacttttatattgcctctcagttacc
aagggaagtgcaaggtcacatga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_67799046_67799836
seq2: B6Ng01-213B11.b_47_852 (reverse)

seq1  CCACT-AACTGCATCT-ATGGCTTGATTC-TTATTTGCTAAACTAAATT-  46
      ||||| |||||||||| |||||||||||| |||| || ||||||||||| 
seq2  CCACTAAACTGCATCTAATGGCTTGATTCTTTATATGATAAACTAAATTT  50

seq1  -GACTTTTCAA--CATCC-AGCC-ATTTCCCAAGGC-CCAGGCTG-TTAA  89
       |  |||||||   |||| |||| |||||||||||| |||||||| ||||
seq2  GGCTTTTTCAAACAATCCAAGCCAATTTCCCAAGGCACCAGGCTGTTTAA  100

seq1  AAAG-AAAGAAAAAATGTTTATTTTCCAACATTCTTTTT--AAATTTTCT  136
      |||| ||||||||||||||||||||||||||||||||||  || ||||||
seq2  AAAGAAAAGAAAAAATGTTTATTTTCCAACATTCTTTTTTAAATTTTTCT  150

seq1  CTTATTAAAGGTACCAGGTTTATCTTCCCACTTG-AAAAGCAAGGTTTAT  185
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  CTTATTAAAGGTACCAGGTTTATCTTCCCACTTGAAAAAGCAAGGTATAT  200

seq1  CTTTGATACATTTACCACATGTATATAAGCAAATCATTAAGTAGAGAGAA  235
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATACATTTACCACATGTATATAAGCAAATCATTAAGTAGAGAGAA  250

seq1  AAATATGAACCGTGAAGCTGATTGAAATGGGAGGGAGAGTGGGGGAAGTC  285
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGAACCGTGAAGCTGATTGAAATGGGAGGGAGAGTGGGGGAAGTC  300

seq1  TGGTCATCTCTTCCTGGAGGCATGGACAAGTAAGCAAAGGTTGGAATTGA  335
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATCTCTTCCTGGAGGCATGGACAAGTAAGCAAAGGTTGGAATTGA  350

seq1  GATCCCTCAGATACCACTTTCCATCAATTCTGCCCTGTTTGACATTGAAC  385
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTCAGATACCACTTTCCATCAATTCTGCCCTGTTTGACATTGAAC  400

seq1  TTGACACTTGTCTTATCCTGTCATTTTTCATGGCTATTACCCCCTCCATA  435
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACACTTGTCTTATCCTGTCATTTTTCATGGCTATTACCCCCTCCATA  450

seq1  GCTCCACCCCACCCCCATTTCATGTCTTCTAAACCATTTCTGTAGTCTTT  485
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACCCCACCCCCATTTCATGTCTTCTAAACCATTTCTGTAGTCTTT  500

seq1  GGATTATTTGCTCCCTCCTTCTTTCAAACAACCTTTGATTCCGATAAACC  535
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATTTGCTCCCTCCTTCTTTCAAACAACCTTTGATTCCGATAAACC  550

seq1  TGACTGAAACACAAGCATCTGCACCTATCTTAGGTCAGCGGGAGAGAGAT  585
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGAAACACAAGCATCTGCACCTATCTTAGGTCAGCGGGAGAGAGAT  600

seq1  TCTTTCTCCACTCTAAGCATAATTGGCAAAAACATCATTAGAGAGCTTAG  635
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCCACTCTAAGCATAATTGGCAAAAACATCATTAGAGAGCTTAG  650

seq1  GAAATGATGTGAATGCATTCAACATGAACAAGAAATATAAGAGTAAACAC  685
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGATGTGAATGCATTCAACATGAACAAGAAATATAAGAGTAAACAC  700

seq1  TTAAAGGGCATGGGGTCCAGAACAAAAGCCAAAAGCTGTTACCTCCAGGC  735
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGGCATGGGGTCCAGAACAAAAGCCAAAAGCTGTTACCTCCAGGC  750

seq1  AGGCGATGTGGGTGGTGTGTGGGTGTGCAAGAGTGCAGCAGTTCCCTGGT  785
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGATGTGGGTGGTGTGTGGGTGTGCAAGAGTGCAGCAGTTCCCTGGT  800

seq1  GAATTC  791
      ||||||
seq2  GAATTC  806