BAC Information

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BAC

Clone NameB6Ng01-213N01
Chromosome3 (Build37)
Map Location 120,371,192 - 120,372,322
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043278, Ptbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213N01.bB6Ng01-213N01.g
ACCGA031235GA031236
length1,131533
definitionB6Ng01-213N01.b B6Ng01-213N01.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctacttctgaccttggtaataataaataatccacaggctttagt
cttctaccctgctaacacctcccaaatatatatgcctataaaatcccaac
ccagcatgcatattgctttctctacttttgatctatcgaagccaattaag
tagttaaagatcatttgcacagtcaaaatctttgctaaataaacagcatt
tccatggcccatttcagtcagaatgtgtaaaaagaaaatgtcccaaggat
attgtcttatatttgtattatgaatatagagaaaatagtaagtacaatag
acaaaattttttggatgatagccttggaactgtgcagctaatgttgggac
acacacacacacacacacacacacacacacaaccctaagtgatctccagg
cattcactgttgctttcatatcatcctcttctctaaagaaaagaaaaaag
aaaaaaaatctatttgggagacgaaagatggctctgcagttaagagcact
gaatgctcttccagacacccaggttggattcccacactccacatggccac
taacttctatttgtaattctagttccagggtgattccagtgccctcttct
ggcctcagtgggctctgcatgtatgtgatgcacatacagacacatacatg
caagcaaaacacccatacacgtaaaatgaataaatctaaaaatcttcttt
tcaaaactttcatctcgatatctcaggagacagtaactccatgccttttt
tcattataactgtcattcagtgacttcctcccaagtccccaggcaaccca
tttctcctaacttccaagcctttgtcagtcatagctcacacccaccctta
tcctgcctgtcttttgggttcatatgcaaattatctttcaaattcatcca
tctttcagtgcttgggattttttcaaggagctgtcctccacactaaccca
gatacctctctttggtcccactctgataaaatttcctctctgatcccagt
tccacgctttcccttgtcccttctagttcattcctataagcatctcaacc
ccagcagactatattctgactactcgggccctgttcggtgtcatcactct
aacatcttcttaacccacttaattcacctgg

agttgaaattttttgaatgaaagtaggtctttgttgtttatggtttttct
tttaactaagaagtaattctatgtgtatagatattttgcctgcatatact
tctatataccacatgcagagctagtactcagagataccatagagggcaat
ggattcccctggaactgaggttaaagatagttacaagccatcatataggt
gctgggaatcaactcaggttttctggaagagtggccagtgcttttacctg
ctgagtcatccctccagaccctatttaatgttcgtttaatgcagtatata
aacgcagaaatctggagcaattacattcaaataaatgatggataggagtt
gcctaaatgagaaaaaaaaatgtcacctagggtcctgacatgttagcata
agaaaaccagctctcttttcaaacaggatgagatattttattttgtagcc
aaatatgagtgatcatgttccaaagtggaaatagtttgctgaagtttttt
ttttaaataatatgtatagatgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120371192_120372322
seq2: B6Ng01-213N01.b_44_1174

seq1  GAATTCCTACTTCTGACCTTGGTAATAATAAATAATCCACAGGCTTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTTCTGACCTTGGTAATAATAAATAATCCACAGGCTTTAGT  50

seq1  CTTCTACCCTGCTAACACCTCCCAAATATATATGCCTATAAAATCCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACCCTGCTAACACCTCCCAAATATATATGCCTATAAAATCCCAAC  100

seq1  CCAGCATGCATATTGCTTTCTCTACTTTTGATCTATCGAAGCCAATTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCATGCATATTGCTTTCTCTACTTTTGATCTATCGAAGCCAATTAAG  150

seq1  TAGTTAAAGATCATTTGCACAGTCAAAATCTTTGCTAAATAAACAGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAAGATCATTTGCACAGTCAAAATCTTTGCTAAATAAACAGCATT  200

seq1  TCCATGGCCCATTTCAGTCAGAATGTGTAAAAAGAAAATGTCCCAAGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGGCCCATTTCAGTCAGAATGTGTAAAAAGAAAATGTCCCAAGGAT  250

seq1  ATTGTCTTATATTTGTATTATGAATATAGAGAAAATAGTAAGTACAATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTTATATTTGTATTATGAATATAGAGAAAATAGTAAGTACAATAG  300

seq1  ACAAAATTTTTTGGATGATAGCCTTGGAACTGTGCAGCTAATGTTGGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTTTTTGGATGATAGCCTTGGAACTGTGCAGCTAATGTTGGGAC  350

seq1  ACACACACACACACACACACACACACACACAACCCTAAGTGATCTCCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACAACCCTAAGTGATCTCCAGG  400

seq1  CATTCACTGTTGCTTTCATATCATCCTCTTCTCTAAAGAAAAGAAAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTGTTGCTTTCATATCATCCTCTTCTCTAAAGAAAAGAAAAAAG  450

seq1  AAAAAAAATCTATTTGGGAGACGAAAGATGGCTCTGCAGTTAAGAGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAATCTATTTGGGAGACGAAAGATGGCTCTGCAGTTAAGAGCACT  500

seq1  GAATGCTCTTCCAGACACCCAGGTTGGATTCCCACACTCCACATGGCCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTCTTCCAGACACCCAGGTTGGATTCCCACACTCCACATGGCCAC  550

seq1  TAACTTCTATTTGTAATTCTAGTTCCAGGGTGATTCCAGTGCCCTCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCTATTTGTAATTCTAGTTCCAGGGTGATTCCAGTGCCCTCTTCT  600

seq1  GGCCTCAGTGGGCTCTGCATGTATGTGATGCACATACAGACACATACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAGTGGGCTCTGCATGTATGTGATGCACATACAGACACATACATG  650

seq1  CAAGCAAAACACCCATACACGTAAAATGAATAAATCTAAAAATCTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAAACACCCATACACGTAAAATGAATAAATCTAAAAATCTTCTTT  700

seq1  TCAAAACTTTCATCTCGATATCTCAGGAGACAGTAACTCCATGCC-TTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCAAAACTTTCATCTCGATATCTCAGGAGACAGTAACTCCATGCCTTTTT  750

seq1  TCATTATAACTGTCATTCAGTGACTTCCTCCCAAGTCCCCAGGCAACCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATAACTGTCATTCAGTGACTTCCTCCCAAGTCCCCAGGCAACCCA  800

seq1  TTTCTCCTAACTTCCAAGCC-TTGTCAGTCATAGCTCACACCCACCCTTA  848
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTTCTCCTAACTTCCAAGCCTTTGTCAGTCATAGCTCACACCCACCCTTA  850

seq1  TCCTGCCTGTCTTTTGGGTTCATATGCAAATTATCTTTCAAATTCATCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCTGTCTTTTGGGTTCATATGCAAATTATCTTTCAAATTCATCCA  900

seq1  TCTTTCAGTGCTTTGGATTTTTTC-AGGAGCTGTCCTCCACACTAACCCA  947
      ||||||||||||| |||||||||| |||||||||||||||||||||||||
seq2  TCTTTCAGTGCTTGGGATTTTTTCAAGGAGCTGTCCTCCACACTAACCCA  950

seq1  GATACCTCTCTTTGGTCCCACTCTGATAAAA-TTCCTCTCTGATCCCAGT  996
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GATACCTCTCTTTGGTCCCACTCTGATAAAATTTCCTCTCTGATCCCAGT  1000

seq1  TCCACGC-TTCCCTGGTCCC-TCTAGTTCATTCCTATTAGCATCTCAACC  1044
      ||||||| |||||| ||||| |||||||||||||||| ||||||||||||
seq2  TCCACGCTTTCCCTTGTCCCTTCTAGTTCATTCCTATAAGCATCTCAACC  1050

seq1  CCAGCAGAACCTATAATCCTGACTACTC-GGCCCTGTTTCGTTGGTCATC  1093
      ||||||||  |||| || |||||||||| |||||||||  ||  ||||||
seq2  CCAGCAGA--CTAT-ATTCTGACTACTCGGGCCCTGTTCGGT--GTCATC  1095

seq1  AACTCTAACATCCTCTTTACCCACTTTAAATCACCTGG  1131
       ||||||||||| |||| |||||| |||| ||||||||
seq2  -ACTCTAACATCTTCTTAACCCAC-TTAATTCACCTGG  1131


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