BAC Information

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BAC

Clone NameB6Ng01-213O04
Chromosome3 (Build37)
Map Location 16,093,977 - 16,095,173
singlet/doubletsinglet
Overlap geneYthdf3
Upstream geneLOC100039985, LOC751864, Sirpb1, LOC668101, LOC100038947, LOC622425, LOC664795, LOC381484
Downstream geneLOC100040034, LOC100040059
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-213O04.bB6Ng01-213O04.g
ACCGA031284GA031285
length1,1911,202
definitionB6Ng01-213O04.b B6Ng01-213O04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactttgtagaccaggctggcctcgaactcagaaaccctcctgcc
tctgcttcccaggtgctgggattaaaggcgtgcgccaccactgccctgct
tgtacctcaggttcttaatagaagtagatttcattttacttgttgtaaag
atgagtaataacacttttcatcaatcttttaaaaatacctaatatttaat
acttaattttacatatttgaacaaatatgaatagaaagaaatggtataac
tgaaaactcaaattaaaattgagctatgttaatatgccttgagaacagta
aacattagccttttttaatttttcaagtttttttatagttaataaaaaat
taaactgttattaatagcattaaagaatcatgactataaattattgtata
attgcaaagaagcacttttagtaatttcctaaaaagaatgtttatcctgg
gagagaaccctctgaagtgttgaatagctttaacattccttacaggcttg
aagtatagttcggttttcttaaagtgtgcatagcatgcataaggctttgg
atatcattctgccttcatcgccctcccaagtttttacactatgaagagca
aaagtcatccttattttataaacaaaaagaaattcaatggcctgtcagga
tagtggatattgaaaatggcaatgtaagaaattgagtccttaccttcttt
atagtagatctggactagctttgagattatcctatctggtagtttacatt
tgaaaaagaggtacgttaagttctggtaataaatacagctgtaaatatga
taccacatttcctatttgaaattatataaaatattaaatataaagaaaaa
aatgttataatgagcatatgcattacttagagtttgctattgctatttca
tttgtcttatttatttcttaatgtttttctttttaacaaatacctttatt
ataggatatgatttaatcattttcaggacctgtcaactcctcttagattc
aactctacctactatcttattgtcttgtttaaaaaacttcttttaattca
ttttaaaatcttacagagttttcatattcttcaataagtagatcagtttt
ctaaggtgggtcagcatttacagttataaatatttaccgctctaaatatt
taattcttagaataaagttatatgtaatagcaaaatccaag

gaattccagttttatgtttgatgccaaattcttgacaaaatgaagtaaaa
tttttgctagaataggatggcccattatctgtcttaataagtttaggcaa
tccaatggcattaaaggcttgtaggcaatgatcaattacatttttgaggc
ttctccagtatgcagagaagcaaaaagaaatcctgaacaagtatcaatag
aaacatttacatattttaattttccaaattctgcataatgagttacatcc
atttgccaaatatgattaggcatgtggcactggagataatgtaatacatt
taggacattgttttacaatcattcttgcctgctccttagtgatcttaagt
cggagctttaaggtatggctagagagaagaaaattttcatgatcatgctt
ggccaaagcaacaggatctgaaattaaggcttctcctattagagctctgt
tgatgcaatcattgccttcagttaaaggtccaggaagaccaaaatgagct
cgtatgtggtcaatatagaatgggtgtttttgagcaagaatgatgttttg
caattgtgaaaacagggatcctgctggcatattaaagttaaaagtacctc
aggtctccaataagggtaccgattgtgcaacatataaactatcagtaaaa
atattaaaagcctcatgcacagactgaaagacattcagtactgttgttaa
ttctcctaattgagctgagaggccaggagtctttatgattacctgttgat
tattaataagaaatccagctcgccctttagaggagccatcagtaaaaatc
aatagagtattatataaagggtgtaaggaagtaattttaggaaatatcac
ctcatgtacatttaaaattttttatgaacctatcttgagggaagtagctg
tctatagttctttttaaatcctatttgagaaacaaccaatctgtacttat
gctgtctcagccaagtgtcttgacttacgctgtaaagctgaacataatat
ctggcctctttttcaaaatagttagtgcctgccgtccttcaatgatattc
gtctgggctactgctcataatatggcaagatattgtgtttaaggatatcc
tcggttgtatcccattagagagacctttgtcctatacattcttgatggcc
atgcatccatctagattaccagggtgaatgtccaagagaatttctattat
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_16093977_16095173
seq2: B6Ng01-213O04.b_44_1234

seq1  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAACCCTCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTGTAGACCAGGCTGGCCTCGAACTCAGAAACCCTCCTGCC  50

seq1  TCTGCTTCCCAGGTGCTGGGATTAAAGGCGTGCGCCACCACTGCCCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTCCCAGGTGCTGGGATTAAAGGCGTGCGCCACCACTGCCCTGCT  100

seq1  TGTACCTCAGGTTCTTAATAGAAGTAGATTTCATTTTACTTGTTGTAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCTCAGGTTCTTAATAGAAGTAGATTTCATTTTACTTGTTGTAAAG  150

seq1  ATGAGTAATAACACTTTTCATCAATCTTTTAAAAATACCTAATATTTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTAATAACACTTTTCATCAATCTTTTAAAAATACCTAATATTTAAT  200

seq1  ACTTAATTTTACATATTTGAACAAATATGAATAGAAAGAAATGGTATAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAATTTTACATATTTGAACAAATATGAATAGAAAGAAATGGTATAAC  250

seq1  TGAAAACTCAAATTAAAATTGAGCTATGTTAATATGCCTTGAGAACAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACTCAAATTAAAATTGAGCTATGTTAATATGCCTTGAGAACAGTA  300

seq1  AACATTAGCCTTTTTTAATTTTTCAAGTTTTTTTATAGTTAATAAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTAGCCTTTTTTAATTTTTCAAGTTTTTTTATAGTTAATAAAAAAT  350

seq1  TAAACTGTTATTAATAGCATTAAAGAATCATGACTATAAATTATTGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTGTTATTAATAGCATTAAAGAATCATGACTATAAATTATTGTATA  400

seq1  ATTGCAAAGAAGCACTTTTAGTAATTTCCTAAAAAGAATGTTTATCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAAGAAGCACTTTTAGTAATTTCCTAAAAAGAATGTTTATCCTGG  450

seq1  GAGAGAACCCTCTGAAGTGTTGAATAGCTTTAACATTCCTTACAGGCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAACCCTCTGAAGTGTTGAATAGCTTTAACATTCCTTACAGGCTTG  500

seq1  AAGTATAGTTCGGTTTTCTTAAAGTGTGCATAGCATGCATAAGGCTTTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATAGTTCGGTTTTCTTAAAGTGTGCATAGCATGCATAAGGCTTTGG  550

seq1  ATATCATTCTGCCTTCATCGCCCTCCCAAGTTTTTACACTATGAAGAGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATTCTGCCTTCATCGCCCTCCCAAGTTTTTACACTATGAAGAGCA  600

seq1  AAAGTCATCCTTATTTTATAAACAAAAAGAAATTCAATGGCCTGTCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATCCTTATTTTATAAACAAAAAGAAATTCAATGGCCTGTCAGGA  650

seq1  TAGTGGATATTGAAAATGGCAATGTAAGAAATTGAGTCCTTACCTTCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGATATTGAAAATGGCAATGTAAGAAATTGAGTCCTTACCTTCTTT  700

seq1  ATAGTAGATCTGGACTAGCTTTGAGATTATCCTATCTGGTAGTTTACATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTAGATCTGGACTAGCTTTGAGATTATCCTATCTGGTAGTTTACATT  750

seq1  TGAAAAAGAGGTACGTTAAGTTCTGGTAATAAATACAGCTGTAAATATGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAGAGGTACGTTAAGTTCTGGTAATAAATACAGCTGTAAATATGA  800

seq1  TACCACATTTCCTATTTGAAATTATATAAAATATTAAATATAAAGAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCACATTTCCTATTTGAAATTATATAAAATATTAAATATAAAGAAAAA  850

seq1  AATGTTATAATGAGCATATGCATTACTTAGAGTTTGCTATTGCTATTTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTATAATGAGCATATGCATTACTTAGAGTTTGCTATTGCTATTTCA  900

seq1  TTTGTCTTATTTATTTCTTAATGTTTTTCTTTTTAACAAATACCTTTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTATTTATTTCTTAATGTTTTTCTTTTTAACAAATACCTTTATT  950

seq1  ATAGGATATGATTTAATCATTTTCA-GACCTGTCAACTCCTCTTAGATTC  999
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATAGGATATGATTTAATCATTTTCAGGACCTGTCAACTCCTCTTAGATTC  1000

seq1  AACTCTACCTACTATCTTA-TGTCTTGTTTAAAAAACTTCTTTTAATTCA  1048
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AACTCTACCTACTATCTTATTGTCTTGTTTAAAAAACTTCTTTTAATTCA  1050

seq1  TTTTAAAATCTTACAGAGTTTTCATATTC-TCCATAAGTAGATCAGTTTT  1097
      ||||||||||||||||||||||||||||| || |||||||||||||||||
seq2  TTTTAAAATCTTACAGAGTTTTCATATTCTTCAATAAGTAGATCAGTTTT  1100

seq1  TCCTAA-GTGGGTCAGCATTTACAGTTATAAATATTTACGGTCTTAAATA  1146
        |||| |||||||||||||||||||||||||||||||| |   ||||||
seq2  --CTAAGGTGGGTCAGCATTTACAGTTATAAATATTTACCGCTCTAAATA  1148

seq1  TTTTAATTTTCTTTTAGAAATAAAATTTATATGTAATATGCAAAATCCAA  1196
       ||||||    | ||||||   ||| |||||||||||| |||||||||||
seq2  -TTTAAT----TCTTAGAA--TAAAGTTATATGTAATA-GCAAAATCCAA  1190

seq1  G  1197
      |
seq2  G  1191


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