BAC Information

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BAC

Clone NameB6Ng01-214D06
Chromosome3 (Build37)
Map Location 104,605,248 - 104,606,195
singlet/doubletsinglet
Overlap geneMov10
Upstream geneDclre1b, Ap4b1, Gm566, Ptpn22, LOC668452, Rsbn1, Phtf1, Magi3, EG433634, LOC668622, Lrig2, Slc16a1, EG624251, 7530404M11Rik, Ppm1j, Rhoc
Downstream geneCapza1, St7l, LOC100043572, Wnt2b, Cttnbp2nl, 4930564D02Rik, 1700095B22Rik, Kcnd3, Ddx20, 6530418L21Rik, Rap1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214D06.bB6Ng01-214D06.g
ACCGA031515GA031516
length9611,221
definitionB6Ng01-214D06.b B6Ng01-214D06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttatgtttgtcaggctgtcctgtttaccctgtgacctccttc
aagctgtcacgggcccaccttccccacagcaggtctgagttctaacctcc
agggtgagcagcctgggattctggtccacagggtcccaggtcatgggtac
cgagtccaggtcatagtgccggatgtcatgctccatctgcagctcttcca
ggtgcagcagcagccggagtttcacctcatagttcctggatttcagggtt
gtctccagctgggccctgggaagaatggttgagttgcagcaggattatgg
tgagtcaggtaaccctcctgctctggggttcaatcatccccagattgaac
atgctgtgggtgccaaggactgttcaagaggaactggtgagtgagtacag
acggggaggaaccagcagagagaggaagacaagggagcacgccgcacaag
ggttgccacttacttgatctcagcaacctcctttggggcagtgaagatac
ttggtccctgaagaagggtagggagcagttgtcggaggaggatgggtggg
taataggtccccagggccaaacttagctctagttcatagcccttggctct
gtgagaggaaagaaagcatgtcttaaacacagaaacacctcatcttcaaa
gactctggagaggtccccatgggcctgcaggaaacatttctactgacttt
ctgcagtgtggtcagcagccatctagagatgcggtactcctttagcttta
tgcagctaaggttagaccagctgaggtgatgcagtccaaagttagaccac
tctcattttttgtaaagcctaatacttggaatatttaaaaagaaatattt
tgggctggcgagatggcttcagtgggttaagagcgccgactgctctttct
gatagtcccgagtttcaaattctccagcaaccacatggtggctctacaac
catttcgtaac
gaattctcctctgaagaaacagactgggaggaagaagcagctcattatga
gaaaaaagggtaccagccaggtaaagtgctagctaatcagttaaggaagc
caaaagcggctggcgaaggccagtttgctgattggcctcagggcagtcgg
cttcaaggtccgccctatgcggagcccccaccctgcgtagtgcgtcagca
atgcgcagagaggcaatgcgcagagagatgcgcagagaggcaatgcgcag
agaggcagtgcgcagactcattcattcccagagaggaacaaaggaaaata
caacaggcatttccggtctttgaaggagccgagggtgggcgtgtccacgc
tccggtagaatacttacaaattaaagaaattgccgagtcggtccgtaaat
acggaaccaatgctaattttaccttggtgcagttagacaggcttgccggc
atggcactaactcctgccgactggcaaacggttgtaaaagccgctctccc
tagtatgggcaaatatatggaatggagagcgctttggcacgaagctgcac
aagcgcaggcccgagcaaacgcagctgctttgactccagagcagagagat
tggacttttgacttgttaacgggtcagggagcttattctgctgatcaaac
aaactaccattggggagcttatgcccagatttcttccacggctattaggg
cctggaaggcgctctctcgagcaggtgaaaccactggtcagttaacaaag
ataatccagggacctcagaatccttctcagattttgtggccagaatgaca
gaggcagcagagcgtatttttggagagtcagagcaagctgcgcctctgat
aaaacagctaatctatgagcaagccacaaaggagtgccgagcagccatag
ccccaagaaagaacaaaggtttacaagactggctcaggtctgtcgagagc
ttgggggacctctcagcaatgcagtttagcggctgccatcttcaatccca
aaaatgctccatgggcagaatgatcggaggacatgttttactgcagagcc
tggccattttagaaaaaattgcagagctcccgataacaaggagggactct
cactcttttggcttagtgttgcagggttatatcatatgaagccgaccagt
gtgccctgtgaggaattaagggcgctccattctctcgcaggtaagagagg
cgcaccctgagagagaattca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_104605248_104606195
seq2: B6Ng01-214D06.b_48_1008

seq1  GAATTCTTTTATGTTTGTCAGGCTGTCCTGTTTACCCTGTGACCTCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATGTTTGTCAGGCTGTCCTGTTTACCCTGTGACCTCCTTC  50

seq1  AAGCTGTCACGGGCCCACCTTCCCCACAGCAGGTCTGAGTTCTAACCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTCACGGGCCCACCTTCCCCACAGCAGGTCTGAGTTCTAACCTCC  100

seq1  AGGGTGAGCAGCCTGGGATTCTGGTCCACAGGGTCCCAGGTCATGGGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGAGCAGCCTGGGATTCTGGTCCACAGGGTCCCAGGTCATGGGTAC  150

seq1  CGAGTCCAGGTCATAGTGCCGGATGTCATGCTCCATCTGCAGCTCTTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTCCAGGTCATAGTGCCGGATGTCATGCTCCATCTGCAGCTCTTCCA  200

seq1  GGTGCAGCAGCAGCCGGAGTTTCACCTCATAGTTCCTGGATTTCAGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCAGCAGCAGCCGGAGTTTCACCTCATAGTTCCTGGATTTCAGGGTT  250

seq1  GTCTCCAGCTGGGCCCTGGGAAGAATGGTTGAGTTGCAGCAGGATTATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCAGCTGGGCCCTGGGAAGAATGGTTGAGTTGCAGCAGGATTATGG  300

seq1  TGAGTCAGGTAACCCTCCTGCTCTGGGGTTCAATCATCCCCAGATTGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCAGGTAACCCTCCTGCTCTGGGGTTCAATCATCCCCAGATTGAAC  350

seq1  ATGCTGTGGGTGCCAAGGACTGTTCAAGAGGAACTGGTGAGTGAGTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTGGGTGCCAAGGACTGTTCAAGAGGAACTGGTGAGTGAGTACAG  400

seq1  ACGGGGAGGAACCAGCAGAGAGAGGAAGACAAGGGAGCACGCCGCACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGGAGGAACCAGCAGAGAGAGGAAGACAAGGGAGCACGCCGCACAAG  450

seq1  GGTTGCCACTTACTTGATCTCAGCAACCTCCTTTGGGGCAGTGAAGATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCACTTACTTGATCTCAGCAACCTCCTTTGGGGCAGTGAAGATAC  500

seq1  TTGGTCCCTGAAGAAGGGTAGGGAGCAGTTGTCGGAGGAGGATGGGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCCCTGAAGAAGGGTAGGGAGCAGTTGTCGGAGGAGGATGGGTGGG  550

seq1  TAATAGGTCCCCAGGGCCAAACTTAGCTCTAGTTCATAGCCCTTGGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGGTCCCCAGGGCCAAACTTAGCTCTAGTTCATAGCCCTTGGCTCT  600

seq1  GTGAGAGGAAAGAAAGCATGTCTTAAACACAGAAACACCTCATCTTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAGGAAAGAAAGCATGTCTTAAACACAGAAACACCTCATCTTCAAA  650

seq1  GACTCTGGAGAGGTCCCCATGGGCCTGCAGGAAACATTTCTACTGAC-TT  699
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GACTCTGGAGAGGTCCCCATGGGCCTGCAGGAAACATTTCTACTGACTTT  700

seq1  CTGCAGTGTGGTCAGCAGCCATCTAGAGATGCGGTACTCC-TTAGC-TTA  747
      |||||||||||||||||||||||||||||||||||||||| ||||| |||
seq2  CTGCAGTGTGGTCAGCAGCCATCTAGAGATGCGGTACTCCTTTAGCTTTA  750

seq1  TGCAGCTAAGGTTAGACCAGCTGAGGTGATGCAGTCCAAGGTTAGACCAC  797
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGCAGCTAAGGTTAGACCAGCTGAGGTGATGCAGTCCAAAGTTAGACCAC  800

seq1  TCTCA-TTTTTGTAAAGCCTAATACTTGGAATATTT-AAAAGAAATATTT  845
      ||||| |||||||||||||||||||||||||||||| |||||||||||||
seq2  TCTCATTTTTTGTAAAGCCTAATACTTGGAATATTTAAAAAGAAATATTT  850

seq1  TGGGCTGGCGAGATGGC-TCAGT-GGTTAAGAGCGCCGACTGCTC-TTCT  892
      ||||||||||||||||| ||||| ||||||||||||||||||||| ||||
seq2  TGGGCTGGCGAGATGGCTTCAGTGGGTTAAGAGCGCCGACTGCTCTTTCT  900

seq1  GAAGGTCCCGAG-TTCAAAT--CCCAGCAACCACATGGTGGCTC-ACAAC  938
      ||  |||||||| |||||||   ||||||||||||||||||||| |||||
seq2  GATAGTCCCGAGTTTCAAATTCTCCAGCAACCACATGGTGGCTCTACAAC  950

seq1  CA-TCCGTAAC  948
      || | ||||||
seq2  CATTTCGTAAC  961