BAC Information

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BAC

Clone NameB6Ng01-214G17
Chromosome3 (Build37)
Map Location 112,941,066 - 112,941,732
singlet/doubletsinglet
Overlap genenone
Upstream geneEG229746, LOC668717, Utp14B-ps, EG433643
Downstream geneOTTMUSG00000022462, LOC668723, Amy2-2, Amy2-1, LOC100043684, LOC100043686, LOC100043688, LOC100043207, Amy1, Rnpc3, Col11a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214G17.bB6Ng01-214G17.g
ACCGA031673GA031674
length7121,195
definitionB6Ng01-214G17.b B6Ng01-214G17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatataggattatcataaagaattgaggttatctatttgtctaca
tgccatcactataagacagtatatctccatagttctacagagatctgctc
aaaggggtgggctaatacctagtgattgttatatatgtaacaataacaac
caagcacattaatagtaggaatctttcctaaaatgattttctcctggacc
ttgccttatggaactttgtcaaagaatgttaatctaaagtgaagtcactt
cagaaaaatcatttcctagttattagcttgttggctcatgacaaatctcc
aaaaacccacataatgcaattttaaaatggagtataaagctaaacagaga
attcacaacaaaagaatctcaaatgacaaaaagtgatattttgacttctt
cctttttaatttgtatcccctttatctgcttttgttgacaaattgctctg
gctaggacttcaagtacaatgttgaataggtaggaagaaagtggacagcc
ttgtctaggcccttactttggtgggattacttccagattctcacaccatc
tgatctactttccttctaactggaaaaaggaggcacatcaagaaatctga
aagagcacttgatatagaaccctgtaggcagcgagtgacaagtgtcacta
tgaccaatgtgaaaaacaagtgctttctcaggaagacttccagaaggttt
gcatagtatctc
gaattctttgtttagctctgagcaccattttttaatagtgttatataatt
ttctggtgtccacgctcttgagttctttatatatatttctttatatatat
tggatattagtcccctatctgattaagataggtaaagatcctttcccaat
ctgttggtggccttcttgtcttattgactgtgtcttttgccttgcagaag
ctttgcagttttatgaggttccatttgtcaatcctcgatcttacagcaca
agccattgatgttttattcaggaatttttcccctgtgcccatatctttga
gccttttccccaatttctcctctataagtttctgtgtctctggttttatg
tgaagttccttgatccacttacatttgaccttagtacaaggagataggaa
tggatcagttcgcattcttctacatgataacaaaagttgcgccagcacca
tttgttgaaaatgctgtctttcttctactggatggttttagcacccttgt
tgaagatcaagtgaccataggtgtgtgggttcatttctgggtcttcattt
ctattccattggtctacttgtctgtcactataccagtcacatggagtttt
tatcacaattgttctgtagtaaagctttaggtcaggcattgtgattccac
cagaggtacttttatccttgagaagagtttttgctatcctaggttttttg
ttattccagatgaatttgcagactgctctttctaattcgttgaagaattg
agttgggattttgatggggatagcattgaatctgtagattgcttttggca
agatagccatttttacaatgttgatcctgccaatcaatgagcatgggaga
tctttccatcttctgagatcttctttaatttttttctcagagactgaaga
ttatcatacagatcttttccttctttagttagagtcttgccagacatttt
tatattatttgtgactattggagaaggtgattgtttccctaatttctttt
ctcagcttgttatctttgtgtagagaaggccattgactgttggagtattt
ttatattccagcctacttcacaagctggttatacagattagaagtctctg
gtgtacttcaggtcactttaatatacatcgatcctgcgcaaggtaattga
actctttcatgctaccttgatctgtgtactatgtcctggctacga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_112941066_112941732
seq2: B6Ng01-214G17.b_88_753

seq1  TACATGCCATCACTATAAGACAGTATATCTCCATAGTTCTACAGAGATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCCATCACTATAAGACAGTATATCTCCATAGTTCTACAGAGATCT  50

seq1  GCTCAAAGGGGTGGGCTAATACCTAGTGATTGTTATATATGTAACAATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAGGGGTGGGCTAATACCTAGTGATTGTTATATATGTAACAATAA  100

seq1  CAACCAAGCACATTAATAGTAGGAATCTTTCCTAAAATGATTTTCTCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAGCACATTAATAGTAGGAATCTTTCCTAAAATGATTTTCTCCTG  150

seq1  GACCTTGCCTTATGGAACTTTGTCAAAGAATGTTAATCTAAAGTGAAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGCCTTATGGAACTTTGTCAAAGAATGTTAATCTAAAGTGAAGTC  200

seq1  ACTTCAGAAAAATCATTTCCTAGTTATTAGCTTGTTGGCTCATGACAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGAAAAATCATTTCCTAGTTATTAGCTTGTTGGCTCATGACAAAT  250

seq1  CTCCAAAAACCCACATAATGCAATTTTAAAATGGAGTATAAAGCTAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAAAAACCCACATAATGCAATTTTAAAATGGAGTATAAAGCTAAACA  300

seq1  GAGAATTCACAACAAAAGAATCTCAAATGACAAAAAGTGATATTTTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTCACAACAAAAGAATCTCAAATGACAAAAAGTGATATTTTGACT  350

seq1  TCTTCCTTTTTAATTTGTATCCCCTTTATCTGCTTTTGTTGACGAATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCTTCCTTTTTAATTTGTATCCCCTTTATCTGCTTTTGTTGACAAATTGC  400

seq1  TCTGGCTAGGACTTCAAGTACAATGTTGAATAGGTAGGAAGAAAGTGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCTAGGACTTCAAGTACAATGTTGAATAGGTAGGAAGAAAGTGGAC  450

seq1  AGCCTTGTCTAGGCCCTTACTTTGGTGGGATTACTTCCAGATTCTCACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGTCTAGGCCCTTACTTTGGTGGGATTACTTCCAGATTCTCACAC  500

seq1  CATCTGATCTACTTTCCTTCTAACTGGAAAAAGGAGGCACATCAGGAAAT  550
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CATCTGATCTACTTTCCTTCTAACTGGAAAAAGGAGGCACATCAAGAAAT  550

seq1  CTGAAAGAGCACTTGATATAGAACCCTGTAGGCAGCAAAGTGACAAGTGT  600
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  CTGAAAGAGCACTTGATATAGAACCCTGTAGGCAGC-GAGTGACAAGTGT  599

seq1  CAGTATGACCAAAAGGAAAAACAAGTGC-TTCTCAGGAAGACTTCCACAA  649
      || |||||||||   ||||||||||||| ||||||||||||||||||  |
seq2  CACTATGACCAATGTGAAAAACAAGTGCTTTCTCAGGAAGACTTCCA-GA  648

seq1  AGGTTTGCATAGTATCTC  667
      ||||||||||||||||||
seq2  AGGTTTGCATAGTATCTC  666