BAC Information

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BAC

Clone NameB6Ng01-214M03
Chromosome3 (Build37)
Map Location 149,938,018 - 149,939,130
singlet/doubletsinglet
Overlap genenone
Upstream geneEG381483, LOC100040620, LOC100040633
Downstream geneLOC100040455, LOC100040463, LOC623554
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214M03.bB6Ng01-214M03.g
ACCGA031921GA031922
length1,1101,162
definitionB6Ng01-214M03.b B6Ng01-214M03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagatctagggaaagtggaaggatcaatacaagccatgtggaa
aacaaatgatggcataacatcgtggacctcagagtatagcaagcagacct
aggatcaccactgtctttatgatagtctctgcaagtcatactgatcctct
ggtcttcctttaatattattttaaccacaaggtggagaactgttgaactt
ggtgcaacatggcagcaggaatgggggctggcatactaacctatagaaca
agaaccgaaataaaagatcaggaggatggcttagctggtttcgtttgatt
agatgacttacatttcaaaaaaattgcatgagatatgaacatatttcagt
aattatgacgaatttgcatgtactttttaagtataaactatatgttgaca
tctgaaatttaggtaaaacttgatgaattctctccaacagcagattctca
cggcaactgatgtcactaccatcttacctcactctgtggtttcatagtat
cagcctctatcctcttctctccccaggaatttttatgaaacacgtagttt
gtaaataatctaggactgagacacagggctgtgaggagaggacaaccctg
gagaagtagactctagcagcaaacaaataaaacttaatgttggaaaccaa
taccaaggagagttcgaaatttgtttctgtaactgttagtgacctgatca
ctccaaataagtgtaaactgaaatttgtatattatagtgttctatgaaac
atagactattttctaaacttatgtattttatgtatttatttttcaaatgt
tatctcctttcccagtttccctctctggaaccccctatcccaagccccct
cccccagcttctacgaaggtactccccctcccgcctcaccacctggcatt
tcccctacactggggaaacttgccatttcagaggaccaagggcctctcct
cttattgatgccagacaataccattcctctgctacattatgtaaaggagc
catctgtccctccatgtgaactctttggatggtggtttaatccctaagag
ctctggagtctgttggtgaatattgtgtctttcattggggatcaaaccct
tcagctcctt

gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaagtcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgtcagc
agatgctggcgtggatgtggagaaagaggaacactcctccattggtggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatgttagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttgttgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
atggaggagctagagaaagtagccaaggagctaaagggatctgcacccta
taggtggaacacattatgactaccagttaccccgagctctttcttcttag
ctgcatatatatcaaagatgctagtcggcatcactggaaagagaggtcat
gactgcaacttttatgcccaatcatgggaacacccagggcaaaggggaat
ggtgtgtcgagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_149938018_149939130
seq2: B6Ng01-214M03.b_45_1154 (reverse)

seq1  AAGGAGCTGAAGGGGTTTGTATCCCCATAGAAAGAACAACAATATCAACC  50
      ||||||||||| ||||||| |||||||  ||||||   |||||||  |||
seq2  AAGGAGCTGAA-GGGTTTG-ATCCCCAATGAAAGA--CACAATATTCACC  46

seq1  AACCAGACTTCCAGAGCCTCTAGGGATTAAACCACCATCCAAAGAGTTCA  100
      || ||||| ||||||||   ||||||||||||||||||||||||||||||
seq2  AA-CAGAC-TCCAGAGCTCTTAGGGATTAAACCACCATCCAAAGAGTTCA  94

seq1  CATGGAGGGACAGATGGCTCCTTTTACAT-ATGTAGCAGAGG-ATGGTAT  148
      ||||||||||||||||||||| ||||||| |||||||||||| |||||||
seq2  CATGGAGGGACAGATGGCTCC-TTTACATAATGTAGCAGAGGAATGGTAT  143

seq1  TGTCTGGCATCAATAGGAGGAGAGGCCCTTGGTCCTCTG-AATGGCAAGT  197
      ||||||||||||||| ||||||||||||||||||||||| ||||||||||
seq2  TGTCTGGCATCAATAAGAGGAGAGGCCCTTGGTCCTCTGAAATGGCAAGT  193

seq1  TTCCCCAGTGTAGGGG-AATGCCAGGGTGGTGAGGCGGGAGGGGGAGTAC  246
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  TTCCCCAGTGTAGGGGAAATGCCA-GGTGGTGAGGCGGGAGGGGGAGTAC  242

seq1  CTTCGTAGAAGCTGGGGGAGGGGGCTTGGGATAGGGGGTTCCAGAGA-GG  295
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTCGTAGAAGCTGGGGGAGGGGGCTTGGGATAGGGGGTTCCAGAGAGGG  292

seq1  AAACTGGGAAAGGAGATAACATTTGAAAAATAAATACATAAAATACATAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGGAAAGGAGATAACATTTGAAAAATAAATACATAAAATACATAA  342

seq1  GTTTAGAAAATAGTCTATGTTTCATAGAACACTATAATATACAAATTTCA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAAAATAGTCTATGTTTCATAGAACACTATAATATACAAATTTCA  392

seq1  GTTTACACTTATTTGGAGTGATCAGGTCACTAACAGTTACAGAAACAAAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACACTTATTTGGAGTGATCAGGTCACTAACAGTTACAGAAACAAAT  442

seq1  TTCGAACTCTCCTTGGTATTGGTTTCCAACATTAAGTTTTATTTGTTTGC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGAACTCTCCTTGGTATTGGTTTCCAACATTAAGTTTTATTTGTTTGC  492

seq1  TGCTAGAGTCTACTTCTCCAGGGTTGTCCTCTCCTCACAGCCCTGTGTCT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGAGTCTACTTCTCCAGGGTTGTCCTCTCCTCACAGCCCTGTGTCT  542

seq1  CAGTCCTAGATTATTTACAAACTACGTGTTTCATAAAAATTCCTGGGGAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTAGATTATTTACAAACTACGTGTTTCATAAAAATTCCTGGGGAG  592

seq1  AGAAGAGGATAGAGGCTGATACTATGAAACCACAGAGTGAGGTAAGATGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGATAGAGGCTGATACTATGAAACCACAGAGTGAGGTAAGATGG  642

seq1  TAGTGACATCAGTTGCCGTGAGAATCTGCTGTTGGAGAGAATTCATCAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACATCAGTTGCCGTGAGAATCTGCTGTTGGAGAGAATTCATCAAG  692

seq1  TTTTACCTAAATTTCAGATGTCAACATATAGTTTATACTTAAAAAGTACA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCTAAATTTCAGATGTCAACATATAGTTTATACTTAAAAAGTACA  742

seq1  TGCAAATTCGTCATAATTACTGAAATATGTTCATATCTCATGCAATTTTT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATTCGTCATAATTACTGAAATATGTTCATATCTCATGCAATTTTT  792

seq1  TTGAAATGTAAGTCATCTAATCAAACGAAACCAGCTAAGCCATCCTCCTG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATGTAAGTCATCTAATCAAACGAAACCAGCTAAGCCATCCTCCTG  842

seq1  ATCTTTTATTTCGGTTCTTGTTCTATAGGTTAGTATGCCAGCCCCCATTC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTATTTCGGTTCTTGTTCTATAGGTTAGTATGCCAGCCCCCATTC  892

seq1  CTGCTGCCATGTTGCACCAAGTTCAACAGTTCTCCACCTTGTGGTTAAAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCCATGTTGCACCAAGTTCAACAGTTCTCCACCTTGTGGTTAAAA  942

seq1  TAATATTAAAGGAAGACCAGAGGATCAGTATGACTTGCAGAGACTATCAT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTAAAGGAAGACCAGAGGATCAGTATGACTTGCAGAGACTATCAT  992

seq1  AAAGACAGTGGTGATCCTAGGTCTGCTTGCTATACTCTGAGGTCCACGAT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGTGGTGATCCTAGGTCTGCTTGCTATACTCTGAGGTCCACGAT  1042

seq1  GTTATGCCATCATTTGTTTTCCACATGGCTTGTATTGATCCTTCCACTTT  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCCATCATTTGTTTTCCACATGGCTTGTATTGATCCTTCCACTTT  1092

seq1  CCCTAGATCTGAGAATTC  1113
      ||||||||||||||||||
seq2  CCCTAGATCTGAGAATTC  1110


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