BAC Information

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BAC

Clone NameB6Ng01-215G11
Chromosome3 (Build37)
Map Location 127,650,078 - 127,651,272
singlet/doubletsinglet
Overlap genenone
Upstream geneAnk2, LOC100043749, LOC100043361, LOC100043364, Larp7, 4930422G04Rik, Neurog2, Alpk1, T2bp, BC002199, 5730508B09Rik
Downstream geneLOC100043382, EG668828, LOC100043393
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-215G11.bB6Ng01-215G11.g
ACCGA032382GA032383
length1,190644
definitionB6Ng01-215G11.b B6Ng01-215G11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggaagtcttcctctctagagggttcagtgccaatggcctttg
agtataaacagtactaagtttagaatttgtgtatatctcaacttaacctc
agctcatggttatcacaacaaagaactccgatacatggtttctactcctt
agaactctccatagctttgaatgttacatcctgcctatcttcgtgaagta
tataccaaaagagaagagggcttacaatgaacaagttatgcacacgaagc
agatgctgtcatttctgtttgtaatgagaggcatttttgtttgactgtag
agaggttttttaaaaattattttaatatatgaaattgtaaggaaaaaaat
taatagaaaatatttcccattaagagcttgcagccaacgtgtagggaaca
aacaagaactcaccatgggcacagacttaagtagctctgaacagagatga
agttcaaaggcatcccttgaccaagagaggctaccactcttgactctaaa
cgtgatctctgagcttgacttccagctgccagacatccagagttgtttta
tcctgcattggggttcttagaatgatctaaagtatttctccttacttttt
caggaacccccaagaatctcgagccttctcgatcttgggattaacttaaa
attgctgtttttgaacccttaaaatcctagactcccaagcattgcagtca
cataattcatactttctttctttctttctttctttctttctttctttctt
tctttctttctttctttctttctttctttctttaatcagaattggatccg
aagaaagctggtggcagctctcctctcccatctgtcctctctgagatgta
agaatgggagctctccttaccgcaggccagttcttcctttctacctggct
acaccggtgccctggcatgcgtctgctctgctgccctctgctttaagttt
ctgagtaaagattttcagaaacaaaggactctgcatcagccttatccacc
aaccaatgaattcaggtaagaagtattactttttcttacaacttctctga
aaagaaagcaaaacttttcttttatcttagagtagtatatattgatgaat
aaaaaatagtgagccgaaagtttttatcacacaataatgacgttcatgtg
cttcaacgtccagacctccctttactgtccttgattctga

gaattctttatttagctctgtacccatttttaacagggctattttggttc
tctggagtctaacttcttgagttctttgtataaattgggtattagccctc
agtccttcttagaaaggggaacaaaatacccatgggaggagataaagaga
caaagtatggagcagagactgaaggaaaggccatccagagactgccccac
ctaaggatccatcccatatacagtcaccaaacccagacactcttgcagat
gccaacaagtgcttgctgacaggagcctgatatagctgtctcctgagagt
ctctgccagtgcctgacaaatacagaggtgaatgctctcagccaaccatt
ggactaagcacagggtccccaatggagaagctagagaaaggacccaagga
aatgaaggggtttgcagccccataggaggaacaacaatatgaaccaacca
gtacccccagagctcccaggaactaaaccaccaaccaaaaagtaaacgtg
gagggacccatggctccagccacatatgtagcagagggtggacttgtcag
tcattaatgggatggccttagtcctgtgatggctggatgccccagtgaag
gcaaatgccaggacaaggaagtgggagagggtgggttggtgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_127650078_127651272
seq2: B6Ng01-215G11.b_41_1230

seq1  GAATTCTGGGAAGTCTTCCTCTCTAGAGGGTTCAGTGCCAATGGCCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAGTCTTCCTCTCTAGAGGGTTCAGTGCCAATGGCCTTTG  50

seq1  AGTATAAACAGTACTAAGTTTAGAATTTGTGTATATCTCAACTTAACCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAACAGTACTAAGTTTAGAATTTGTGTATATCTCAACTTAACCTC  100

seq1  AGCTCATGGTTATCACAACAAAGAACTCCGATACATGGTTTCTACTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATGGTTATCACAACAAAGAACTCCGATACATGGTTTCTACTCCTT  150

seq1  AGAACTCTCCATAGCTTTGAATGTTACATCCTGCCTATCTTCGTGAAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCTCCATAGCTTTGAATGTTACATCCTGCCTATCTTCGTGAAGTA  200

seq1  TATACCAAAAGAGAAGAGGGCTTACAATGAACAAGTTATGCACACGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCAAAAGAGAAGAGGGCTTACAATGAACAAGTTATGCACACGAAGC  250

seq1  AGATGCTGTCATTTCTGTTTGTAATGAGAGGCATTTTTGTTTGACTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGTCATTTCTGTTTGTAATGAGAGGCATTTTTGTTTGACTGTAG  300

seq1  AGAGGTTTTTTAAAAATTATTTTAATATATGAAATTGTAAGGAAAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTTTTTAAAAATTATTTTAATATATGAAATTGTAAGGAAAAAAAT  350

seq1  TAATAGAAAATATTTCCCATTAAGAGCTTGCAGCCAACGTGTAGGGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGAAAATATTTCCCATTAAGAGCTTGCAGCCAACGTGTAGGGAACA  400

seq1  AACAAGAACTCACCATGGGCACAGACTTAAGTAGCTCTGAACAGAGATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGAACTCACCATGGGCACAGACTTAAGTAGCTCTGAACAGAGATGA  450

seq1  AGTTCAAAGGCATCCCTTGACCAAGAGAGGCTACCACTCTTGACTCTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAAGGCATCCCTTGACCAAGAGAGGCTACCACTCTTGACTCTAAA  500

seq1  CGTGATCTCTGAGCTTGACTTCCAGCTGCCAGACATCCAGAGTTGTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATCTCTGAGCTTGACTTCCAGCTGCCAGACATCCAGAGTTGTTTTA  550

seq1  TCCTGCATTGGGGTTCTTAGAATGATCTAAAGTATTTCTCCTTACTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCATTGGGGTTCTTAGAATGATCTAAAGTATTTCTCCTTACTTTTT  600

seq1  CAGGAACCCCCAAGAATCTCGAGCCTTCTCGATCTTGGGATTAACTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACCCCCAAGAATCTCGAGCCTTCTCGATCTTGGGATTAACTTAAA  650

seq1  ATTGCTGTTTTTGAACCCTTAAAATCCTAGACTCCCAAGCATTGCAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGTTTTTGAACCCTTAAAATCCTAGACTCCCAAGCATTGCAGTCA  700

seq1  CATAATTCATACTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTCATACTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  750

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTAATCAGAATTGGATCCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTAATCAGAATTGGATCCG  800

seq1  AAGAAAGCTGGTGGCAGCTCTCCTCTCCCATCTGTCCTCTCTGAGATGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCTGGTGGCAGCTCTCCTCTCCCATCTGTCCTCTCTGAGATGTA  850

seq1  AGAATGGGAGCTCTCCTTACCGCAGGCCAGTTCTTCCTTTCTACCTGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGGAGCTCTCCTTACCGCAGGCCAGTTCTTCCTTTCTACCTGGCT  900

seq1  ACACCGGTGCCCTGGCATGCGTCTGCTCTGCTGCCCTCTGCTTTAAGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGGTGCCCTGGCATGCGTCTGCTCTGCTGCCCTCTGCTTTAAGTTT  950

seq1  CTGAGTAAAGATTTTCAGAAACAAAGGACTCTGCATCAGCCTTATCCACC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAAAGATTTTCAGAAACAAAGGACTCTGCATCAGCCTTATCCACC  1000

seq1  AACCAATGAA-TCAGGTAAGAAGTATTAC-TTTTCTTAC-ACTTCTCTG-  1046
      |||||||||| |||||||||||||||||| ||||||||| ||||||||| 
seq2  AACCAATGAATTCAGGTAAGAAGTATTACTTTTTCTTACAACTTCTCTGA  1050

seq1  ATAGAAAGC-AAACTTTCCTTTTATCTTAGAGTTAGTATATATTGATGA-  1094
      | ||||||| ||||||| |||||||||||||| |||||||||||||||| 
seq2  AAAGAAAGCAAAACTTTTCTTTTATCTTAGAG-TAGTATATATTGATGAA  1099

seq1  -TAAAAATAGGTTGAGCCGAGAGTTTTTATCCACACAAATAATGAACGTT  1143
        ||||||||  |||||||| ||||||||| ||||| ||||||| |||||
seq2  TAAAAAATAG--TGAGCCGAAAGTTTTTAT-CACAC-AATAATG-ACGTT  1144

seq1  CATTGTGCTTTCCACACGTCCAGCACCTCCTCTTACTGTCCTCTGATCCT  1193
      || |||||||  || |||||||| ||||||  |||||||||| |||| ||
seq2  CA-TGTGCTT--CA-ACGTCCAG-ACCTCCCTTTACTGTCCT-TGATTCT  1188

seq1  GA  1195
      ||
seq2  GA  1190


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