MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-215H21
Chromosome	3 (Build37)
Map Location	22,727,037 - 22,877,479
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC100040353, Tbl1xr1, LOC545506, LOC675593, LOC100040378
Downstream gene	LOC623751, LOC100039548, EG635702
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC100040353 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs

name	Tbl1xr1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545506 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 14 Proteins pseudo : _no_value

name	LOC675593 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins pseudo : _no_value

name	LOC100040378 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC623751 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:623751
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC100039548 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	EG635702 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:635702 MGI:3643277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	LOC100040353 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250844 GeneID:100040353
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 29 ESTs product : similar to splicing coactivator subunit SRm300 transcript_id : XM_001474539.1

name	Tbl1xr1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:130978338 GeneID:81004 MGI:2441730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transducin (beta)-like 1X-linked receptor 1 transcript_id : NM_030732.3

name	LOC100040378 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250846 GeneID:100040378
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100040378 transcript_id : XM_001474577.1

name	LOC100039548 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149250817 GeneID:100039548
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : hypothetical protein LOC100039548 transcript_id : XM_001473102.1

name	EG635702 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149250819 GeneID:635702 MGI:3643277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG635702 transcript_id : XM_975226.2

name	LOC100040353 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250845 GeneID:100040353
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474589.1

name	Tbl1xr1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543001 CCDS:CCDS17266.1 GeneID:81004 MGI:2441730
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0016568 - chromatin modification [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 note : nuclear receptor corepressor/HDAC3 complex subunit TBLR1; F-box-like/WD repeat protein TBL1XR1; TBL1-related protein 1 product : IRA1 protein protein_id : NP_109657.2

name	LOC100040378 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250847 GeneID:100040378
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474627.1

name	LOC100039548 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149250818 GeneID:100039548
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473152.1

name	EG635702 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149250820 GeneID:635702 MGI:3643277
definition	codon_start : 1 product : similar to N-acetylated alpha-linked acidic dipeptidase 2 protein_id : XP_980320.2

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 1 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 2 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 3 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 4 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 5 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 6 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 7 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 8 pseudo : _no_value

name	LOC623751 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:623751
definition	number : 9 pseudo : _no_value

name	LOC545506 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250815 GeneID:545506
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 145 ESTs, 14 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_031007.1

name	LOC675593 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149250816 GeneID:675593
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 ESTs, 9 Proteins product : similar to spindlin pseudo : _no_value transcript_id : XR_031023.1

clone name	MSMg01-525N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378B16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-543I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-435E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487J22
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-056O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-510D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072K19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-165D09
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-502O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237I17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-071O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-151H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-277L22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-348N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-033L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-111O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038H14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188N10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-215H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-180G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341N03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017I05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-257J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190M13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-120N24
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-215H21.b	B6Ng01-215H21.g
ACC	GA032445	GA032446
length	1,183	1,001
definition	B6Ng01-215H21.b	B6Ng01-215H21.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(22,876,278 - 22,877,479)	(22,727,037 - 22,727,799)
sequence	gaattcattcctagttaaattacaagatacagatgcaatatcctgtaagt cagaaaggtagtggttcctgctaagtcctcttcctcacagtcacattttc ttactcatacactgtgcacctgcctctaagggatacaattccaggacttc atgcatttctttgtcgaaatccacattctatacaatataaggagctttat ttatgtactagttttttaatcatcatacttcaaagatattggaaaatata ttcctaaatataaatatagatgccaataaaaaacaaaaatgagaaaagac agccaagatgttaagagttcagtagtgtgattctccagtaaagagaagaa tagagatattcaaaaacaagaatagctttcctcttgggttaagattttct ttctttataaaatatatagcttgccagtcttggcaggtttccctgggact caaaagaaacatgatcattgtcttttgtaataagtaattcctgtcccatt tgattaaccaagttaatgacatcttaagcactgatagagacaagttaagc agactgaaaaaaaataattttgcagtcaagcatagagtttgccctgatgc ctatgtcatctcactctaagggagaacaggaccacccaagtctctgttca ggatgaggacagtgcaaagtagtccaattcaaatgagattaaagagtaag atgattttccctcctccgagcataataagaaaaattgacactaagtaggc ataactatcattctcaggaagatagtctgactttagtccaccttgataca gaaacaactgtgatctatcttttgatatgtagctgtgtttgtacatgggt ccattcaatgaatgtgaaagggtcagcttgagagagttagtgaacatagc caatatgtaagtcagaattttgacaatctttgcgtgactcagaatagggt taagtctacatagtatatgtcattcttaaaccacactatttttgtctctg tcactcactaattgggttataattataaacaaattatttagagttaaatt tggatcaggagagtaaattccatttactagctattactttttatagcatc aggaaaactcatgcatgttgcatgtgataaagtcaggaccttaagacagc catgtttcaactcatcaagaaagaaacttcact	gaattcatgtcctcatgtttgtgtagaaagtactcttaacaatcaagcta tacaaaccctaatatccttgtttttaatcctaatcaccattaatgtttac cccaggttgggataggtatgtgggaaaggaagttttgagcttttcccaaa attcaagatcaattttaggtaactggaagattccatatgcatcagctgtt ttcttaaaaacccacttatcatttttatgtacttttagttttcttttgct ataaaacatatatttcttttttacaagatattttcttcattacatttcaa atgttatcccctttcctaggtacctctccaaaggtccgctataacctccc accaccctactcctcaacccacccactcgggcttccttttccttgcattc ccctatactgggatatataatcttcacaagaccaagggcctctcctccct ttgatggctgactagatcatcctatgctacatatgcaactagagacacaa gctctggggccttctagatagttcatattgttgctcttcctattggggta agacccctttagctccttgggtattttctctagctccttcattgggcaca gtgagcatccatttctgaatttaccaggcactggcatagcctcacaagag atagctatatctgggtcctatcagcaaaatcttcacatatgtaatagtgt ctgattttggtggctgtttacgggatgggttctctgggtggggcagtctg tagatagttccttccttccctctcagctcggaacttagtttttgtaattc ctttcataagaattttgttctccaatctaagaaggaactaagtattccac acttcttgtgtttcatgtgttttgcaaattgtatatgagtactctaatct ctgggctaatatccacttatcagtgagtacatatcatgtgagttctttac tgattgggttaactcactcaggatgatatcctccagatccatccatttgc c
quality values	Open. 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Hide. 62 59 59 47 62 59 49 59 62 62 30 34 28 24 16 34 50 28 25 38 42 31 54 50 43 62 62 62 62 62 62 62 59 62 62 54 62 62 62 59 59 62 62 59 62 62 62 62 59 62 62 62 62 62 62 54 62 59 56 43 48 43 54 59 59 54 54 62 62 62 49 49 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 54 54 62 62 62 62 62 59 62 62 62 62 54 54 49 54 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 62 62 62 62 62 62 62 59 62 56 54 62 62 62 54 43 43 56 56 62 62 56 62 54 54 56 59 56 62 62 54 56 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 54 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 59 62 62 62 62 62 59 62 54 54 62 59 62 59 59 56 59 59 62 62 54 62 56 54 50 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 59 62 62 62 59 62 62 62 59 62 62 62 62 59 49 49 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 44 54 62 62 62 56 56 62 62 62 56 56 46 56 56 46 46 56 56 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 56 54 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 47 52 52 52 52 54 62 62 62 54 62 52 62 54 54 62 54 62 62 58 54 58 58 58 58 54 58 58 58 58 58 58 52 52 54 45 54 54 54 54 40 47 52 54 54 58 58 54 58 58 46 54 58 52 58 33 41 41 52 54 54 54 54 54 52 46 41 52 47 52 54 58 58 47 54 45 58 58 54 40 58 53 42 49 51 50 51 47 49 50 49 37 37 48 44 58 58 54 49 52 50 48 51 49 48 49 50 48 39 50 34 26 33 50 58 51 52 51 50 58 42 42 53 53 37 42 42 50 28 48 46 39 35 39 41 53 50 28 52 50 35 42 39 47 32 28 35 37 53 42 58 31 44 31 53 41 27 49 41 52 50 58 50 42 58 58 28 29 25 20 39 40 49 41 50 27 42 43 46 58 44 41 42 43 54 35 39 52 49 53 53 52 51 33 29 46 35 39 32 42 53 32 37 37 40 33 20 54 54 46 33 35 30 53 49 25 52 49 25 54 54 40 34 26 54 35 25 20 23 54 19 36 35 37 42 40 37 44 54 42 40 37 54 54 28 24 45 31 40 33 33 42 26 42 21 39 24 32 20 6 10 18 32 32 42 29 31 15 22 19 45 30 34 31 33 21 33 20 31 35 32 31 18 41 33 31 32 32 43 28 28 46 51 51 33 27 19 24 31 27 18 12 18 25 51 25 26 28 31 31 31 21 34 32 33 46 51 38 37 8 33 31 33 30 22 16 25 21 30 26 11 46 14 46 27 18 21 38 19 16 25 31 43 18 41 17 23 10 36 32 19 12 22 27 24 33 38 37 31 33 19 31 21 39 31 38 31 23 39 29 36 17 48 46 29 30 32 25 37 25 18 6 18 10 27 12 24 15 7 13 14 16 24 23 35 32 18 32 9 14 27 13 15 32 26 44 33 21 22 31 34 21 21 31 33 34 28 33 38 42 33 25 14 24 11 22 31 34 32 27 16 20 13 9 13 17 22 27 13 29 9 20 20 12 20 20 12 11 39 19 20 23 24 37 30 19 5 16 39 32 17 17 34 6 7 19 22 12 24 31 24 20 30 13 8 5 4 17 6 5 10 29 22 9 12 31 22 14 34 27 15 21 26 25 18 7 6 28 40 28 19 19 26

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_22876278_22877479
seq2: B6Ng01-215H21.b_48_1230 (reverse)

seq1  AGTGAATGAGTTTC-TTCTTGATGAGTTG-AACATGCTTTGTCTTTTTAA  48
      |||||   |||||| |||||||||||||| ||||||   ||||   ||||
seq2  AGTGA---AGTTTCTTTCTTGATGAGTTGAAACATG-GCTGTC---TTAA  43

seq1  GTTCTTGAATTTTTATCACATGCACATTTCATGAAGTTTTTCTTGATGCT  98
      | || |||   |||||||||||||   | |||||   ||||| |||||||
seq2  GGTCCTGA--CTTTATCACATGCAACATGCATGA--GTTTTCCTGATGCT  89

seq1  ATAAAAAGGTAATAGCTTAGTAAAATTGGATTTACCTTCTCTTGGATCCA  148
      ||||||| |||||||| |||| |||| | ||||||  |||| | ||||||
seq2  ATAAAAA-GTAATAGC-TAGT-AAATGGAATTTAC--TCTCCT-GATCCA  133

seq1  AATTTAACTTCTAAATAATTTGTTTTATAATTATAACCAATTTAGTGAGT  198
      |||||||| ||||||||||||| ||||||||||||||| | |||||||||
seq2  AATTTAAC-TCTAAATAATTTG-TTTATAATTATAACCCAATTAGTGAGT  181

seq1  GACAGAGACAAAAAATAGTTGTGGTTTAAGAATGACATATACTATGTTAG  248
      ||||||||| |||||||| ||||||||||||||||||||||||||| |||
seq2  GACAGAGAC-AAAAATAG-TGTGGTTTAAGAATGACATATACTATG-TAG  228

seq1  ACTTAACCCTATTCTGAGTCACGCAAAGATTGTCAAAATTCTGACTTACA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAACCCTATTCTGAGTCACGCAAAGATTGTCAAAATTCTGACTTACA  278

seq1  TATTGGCTATGTTCACTAACTCTCTCAAGCTGACCC-TTCACATTCATTG  347
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TATTGGCTATGTTCACTAACTCTCTCAAGCTGACCCTTTCACATTCATTG  328

seq1  AATGGACCCATGTACAAACACAGCTACATATCAAAAGATAGATCACAGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACCCATGTACAAACACAGCTACATATCAAAAGATAGATCACAGTT  378

seq1  GTTTCTGTATCAAGGTGGACTAAAGTCAGACTATCTTCCTGAGAATGATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGTATCAAGGTGGACTAAAGTCAGACTATCTTCCTGAGAATGATA  428

seq1  GTTATGCCTACTTAGTGTCAATTTTTCTTATTATGCTCGGAGGAGGGAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGCCTACTTAGTGTCAATTTTTCTTATTATGCTCGGAGGAGGGAAA  478

seq1  ATCATCTTACTCTTTAATCTCATTTGAATTGGACTACTTTGCACTGTCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTACTCTTTAATCTCATTTGAATTGGACTACTTTGCACTGTCCT  528

seq1  CATCCTGAACAGAGACTTGGGTGGTCCTGTTCTCCCTTAGAGTGAGATGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTGAACAGAGACTTGGGTGGTCCTGTTCTCCCTTAGAGTGAGATGA  578

seq1  CATAGGCATCAGGGCAAACTCTATGCTTGACTGCAAAATTATTTTTTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCATCAGGGCAAACTCTATGCTTGACTGCAAAATTATTTTTTTTC  628

seq1  AGTCTGCTTAACTTGTCTCTATCAGTGCTTAAGATGTCATTAACTTGGTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGCTTAACTTGTCTCTATCAGTGCTTAAGATGTCATTAACTTGGTT  678

seq1  AATCAAATGGGACAGGAATTACTTATTACAAAAGACAATGATCATGTTTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATGGGACAGGAATTACTTATTACAAAAGACAATGATCATGTTTC  728

seq1  TTTTGAGTCCCAGGGAAACCTGCCAAGACTGGCAAGCTATATATTTTATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTCCCAGGGAAACCTGCCAAGACTGGCAAGCTATATATTTTATA  778

seq1  AAGAAAGAAAATCTTAACCCAAGAGGAAAGCTATTCTTGTTTTTGAATAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAATCTTAACCCAAGAGGAAAGCTATTCTTGTTTTTGAATAT  828

seq1  CTCTATTCTTCTCTTTACTGGAGAATCACACTACTGAACTCTTAACATCT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATTCTTCTCTTTACTGGAGAATCACACTACTGAACTCTTAACATCT  878

seq1  TGGCTGTCTTTTCTCATTTTTGTTTTTTATTGGCATCTATATTTATATTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCTTTTCTCATTTTTGTTTTTTATTGGCATCTATATTTATATTT  928

seq1  AGGAATATATTTTCCAATATCTTTGAAGTATGATGATTAAAAAACTAGTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATATATTTTCCAATATCTTTGAAGTATGATGATTAAAAAACTAGTA  978

seq1  CATAAATAAAGCTCCTTATATTGTATAGAATGTGGATTTCGACAAAGAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAATAAAGCTCCTTATATTGTATAGAATGTGGATTTCGACAAAGAAA  1028

seq1  TGCATGAAGTCCTGGAATTGTATCCCTTAGAGGCAGGTGCACAGTGTATG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGAAGTCCTGGAATTGTATCCCTTAGAGGCAGGTGCACAGTGTATG  1078

seq1  AGTAAGAAAATGTGACTGTGAGGAAGAGGACTTAGCAGGAACCACTACCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGAAAATGTGACTGTGAGGAAGAGGACTTAGCAGGAACCACTACCT  1128

seq1  TTCTGACTTACAGGATATTGCATCTGTATCTTGTAATTTAACTAGGAATG  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACTTACAGGATATTGCATCTGTATCTTGTAATTTAACTAGGAATG  1178

seq1  AATTC  1202
      |||||
seq2  AATTC  1183

seq1: chr3_22727037_22727799
seq2: B6Ng01-215H21.g_66_830

seq1  GAATTCATGTCCTCATGTTTGTGTAGAAAGTACTCTTAACAATCAAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTCCTCATGTTTGTGTAGAAAGTACTCTTAACAATCAAGCTA  50

seq1  TACAAACCCTAATATCCTTGTTTTTAATCCTAATCACCATTAATGTTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCCTAATATCCTTGTTTTTAATCCTAATCACCATTAATGTTTAC  100

seq1  CCCAGGTTGGGATAGGTATGTGGGAAAGGAAGTTTTGAGCTTTTCCCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGTTGGGATAGGTATGTGGGAAAGGAAGTTTTGAGCTTTTCCCAAA  150

seq1  ATTCAAGATCAATTTTAGGTAACTGGAAGATTCCATATGCATCAGCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGATCAATTTTAGGTAACTGGAAGATTCCATATGCATCAGCTGTT  200

seq1  TTCTTAAAAACCCACTTATCATTTTTATGTACTTTTAGTTTTCTTTTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAAAACCCACTTATCATTTTTATGTACTTTTAGTTTTCTTTTGCT  250

seq1  ATAAAACATATATTTCTTTTTTACAAGATATTTTCTTCATTACATTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACATATATTTCTTTTTTACAAGATATTTTCTTCATTACATTTCAA  300

seq1  ATGTTATCCCCTTTCCTAGGTACCTCTCCAAAGGTCCGCTATAACCTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATCCCCTTTCCTAGGTACCTCTCCAAAGGTCCGCTATAACCTCCC  350

seq1  ACCACCCTACTCCTCAACCCACCCACTCGGGCTTCCTTTTCCTTGCATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCCTACTCCTCAACCCACCCACTCGGGCTTCCTTTTCCTTGCATTC  400

seq1  CCCTATACTGGGATATATAATCTTCACAAGACCAAGGGCCTCTCCTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATACTGGGATATATAATCTTCACAAGACCAAGGGCCTCTCCTCCCT  450

seq1  TTGATGGCTGACTAGATCATCCTATGCTACATATGCAACTAGAGACACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGCTGACTAGATCATCCTATGCTACATATGCAACTAGAGACACAA  500

seq1  GCTCTGGGGCCTTCTAGATAGTTCATATTGTTGCTCTTCCTATTGGGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGGGGCCTTCTAGATAGTTCATATTGTTGCTCTTCCTATTGGGGTA  550

seq1  AGACCCCTTTAGCTCCTTGGGTATTTTCTCTAGCTCCTTCATTGGGCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCCCTTTAGCTCCTTGGGTATTTTCTCTAGCTCCTTCATTGGGCACA  600

seq1  GTGAGCATCCATTTCTGAATTTACCAGGCACTGGCATAGCCTCACAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCATCCATTTCTGAATTTACCAGGCACTGGCATAGCCTCACAAGAG  650

seq1  ATAGCTATATCTGGGTCCTATCAGCAAAATCTTCACATATGTAATAGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTATATCTGGGTCCTATCAGCAAAATCTTCACATATGTAATAGTGT  700

seq1  CTGATTTTGGTGGCTGTTTACGGGAT-GGTTCTCTGGGTGGGGCAGTCTG  749
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGATTTTGGTGGCTGTTTACGGGATGGGTTCTCTGGGTGGGGCAGTCTG  750

seq1  TAGATAG-TCCTTCC  763
      ||||||| |||||||
seq2  TAGATAGTTCCTTCC  765

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information