BAC Information

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BAC

Clone NameB6Ng01-216C15
Chromosome3 (Build37)
Map Location 110,042,981 - 110,130,981
singlet/doubletdoublet
Overlap geneLOC100043183, Prmt6
Upstream geneVav3, Ntng1, LOC100043181
Downstream geneLOC100043190, LOC668712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216C15.bB6Ng01-216C15.g
ACCGA032925GA032926
length1,005337
definitionB6Ng01-216C15.b B6Ng01-216C15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,042,981 - 110,043,681)(110,130,645 - 110,130,981)
sequence
gaattcaaatgcatgaggccatgggaaccgttcttcctcaaaccaccaca
gtgacattgtgatacaactctcttatgtattattaaagggagtgtgaatt
actgtgccatttcagaaagcaaactgctaagattcataaaaaagagcaaa
tacttaggaaaggctggcttcaacatagagaaacacaacagctcatgaag
taagtgtggtggttggaagaatgtctcccacagcctcatatatttgaatg
tttgcgtgcctgttggtgggctcacagcaaagattaggatgtgtggcctt
gttggagaaggtgtgtccttgttggaggaggattgttactggagggaaag
ttttgaggtttgaaaagcctaatgtctacacactgcctcctacttctcta
ggaccttgttggtctgactgtctgtctgtctacctgcctgcctgctgtca
tgcttcctgacataacgatgatagactcatcctctgacactctaaggaag
cccccaactaactttttttttttcttttaaataagagttgagccagagac
atgggatgggggaggcttccaggagtcaatgtgagtgaccttagctgaga
tgcatagcagtggggatatggaacctgaagaggttacctcctgtagccag
gcagggcctccccagtggaaggataaagacaccaacctacccacaaaaaa
ttcttcccaaattttgtcctctctaaaagaaattctgggacaaagatgga
tcagagactaagaaatggccaaccaatatctggcccaacttgagatacat
cccctgagcaagtgccaatccctgacactatcaatgatactctgttatgc
tggcagaaaagagcctagcataactgtcctttgagagctccacccagcag
cttactaaacagatgcagagaccgcagccaacattggtcagaactgggac
tcttatggaaaagtgggggaaggactgaaggctgcccaccctctcagagg
agaga

ttagctgttaacaatggttcccctggagcagaccagagggaaaccagaaa
ggaaatgcttgattgaaccaaaataagatgctacaacatacatgaaaatc
aaagatttcaaatggcaaattaagagtgaagaagtgaaggtgaatatttt
ttttaatctctcttttctggaggctgctaatgcagtggcactggatgctg
ggaaagatgctggaacagatgtagttaatagtcccctgaaatgtgaggac
aaagtggtgccctttcccattaagcttaatttattcaatttaaagaaata
ctctctattctggtggtgtggtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_110042981_110043681
seq2: B6Ng01-216C15.b_46_746

seq1  GAATTCAAATGCATGAGGCCATGGGAACCGTTCTTCCTCAAACCACCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATGCATGAGGCCATGGGAACCGTTCTTCCTCAAACCACCACA  50

seq1  GTGACATTGTGATACAACTCTCTTATGTATTATTAAAGGGAGTGTGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATTGTGATACAACTCTCTTATGTATTATTAAAGGGAGTGTGAATT  100

seq1  ACTGTGCCATTTCAGAAAGCAAACTGCTAAGATTCATAAAAAAGAGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGCCATTTCAGAAAGCAAACTGCTAAGATTCATAAAAAAGAGCAAA  150

seq1  TACTTAGGAAAGGCTGGCTTCAACATAGAGAAACACAACAGCTCATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGGAAAGGCTGGCTTCAACATAGAGAAACACAACAGCTCATGAAG  200

seq1  TAAGTGTGGTGGTTGGAAGAATGTCTCCCACAGCCTCATATATTTGAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGTGGTGGTTGGAAGAATGTCTCCCACAGCCTCATATATTTGAATG  250

seq1  TTTGCGTGCCTGTTGGTGGGCTCACAGCAAAGATTAGGATGTGTGGCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGTGCCTGTTGGTGGGCTCACAGCAAAGATTAGGATGTGTGGCCTT  300

seq1  GTTGGAGAAGGTGTGTCCTTGTTGGAGGAGGATTGTTACTGGAGGGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGAGAAGGTGTGTCCTTGTTGGAGGAGGATTGTTACTGGAGGGAAAG  350

seq1  TTTTGAGGTTTGAAAAGCCTAATGTCTACACACTGCCTCCTACTTCTCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGGTTTGAAAAGCCTAATGTCTACACACTGCCTCCTACTTCTCTA  400

seq1  GGACCTTGTTGGTCTGACTGTCTGTCTGTCTACCTGCCTGCCTGCTGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTGTTGGTCTGACTGTCTGTCTGTCTACCTGCCTGCCTGCTGTCA  450

seq1  TGCTTCCTGACATAACGATGATAGACTCATCCTCTGACACTCTAAGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTGACATAACGATGATAGACTCATCCTCTGACACTCTAAGGAAG  500

seq1  CCCCCAACTAACTTTTTTTTTTTCTTTTAAATAAGAGTTGAGCCAGAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAACTAACTTTTTTTTTTTCTTTTAAATAAGAGTTGAGCCAGAGAC  550

seq1  ATGGGATGGGGGAGGCTTCCAGGAGTCAATGTGAGTGACCTTAGCTGAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGGGGGAGGCTTCCAGGAGTCAATGTGAGTGACCTTAGCTGAGA  600

seq1  TGCATAGCAGTGGGGATATGGAACCTGAAGAGGTTACCTCCTGTAGCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAGCAGTGGGGATATGGAACCTGAAGAGGTTACCTCCTGTAGCCAG  650

seq1  GCAGGGCCTCCCCAGTGGAAGGATAAAGACACCAACCTACCCACAAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCCTCCCCAGTGGAAGGATAAAGACACCAACCTACCCACAAAAAA  700

seq1  T  701
      |
seq2  T  701


seq1: chr3_110130645_110130981
seq2: B6Ng01-216C15.g_71_407 (reverse)

seq1  CACACACACACACACACCACACCACCAGAATAGAGAGTATTTCTTTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACCACACCACCAGAATAGAGAGTATTTCTTTAAAT  50

seq1  TGAATAAATTAAGCTTAATGGGAAAGGGCACCACTTTGTCCTCACATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAATTAAGCTTAATGGGAAAGGGCACCACTTTGTCCTCACATTTC  100

seq1  AGGGGACTATTAACTACATCTGTTCCAGCATCTTTCCCAGCATCCAGTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGACTATTAACTACATCTGTTCCAGCATCTTTCCCAGCATCCAGTGC  150

seq1  CACTGCATTAGCAGCCTCCAGAAAAGAGAGATTAAAAAAAATATTCACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCATTAGCAGCCTCCAGAAAAGAGAGATTAAAAAAAATATTCACCT  200

seq1  TCACTTCTTCACTCTTAATTTGCCATTTGAAATCTTTGATTTTCATGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTTCACTCTTAATTTGCCATTTGAAATCTTTGATTTTCATGTAT  250

seq1  GTTGTAGCATCTTATTTTGGTTCAATCAAGCATTTCCTTTCTGGTTTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGCATCTTATTTTGGTTCAATCAAGCATTTCCTTTCTGGTTTCCC  300

seq1  TCTGGTCTGCTCCAGGGGAACCATTGTTAACAGCTAA  337
      |||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCTGCTCCAGGGGAACCATTGTTAACAGCTAA  337


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