BAC Information

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BAC

Clone NameB6Ng01-216G10
Chromosome3 (Build37)
Map Location 46,215,181 - 46,216,326
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039282, LOC433580, LOC671801
Downstream geneEG241989, LOC545517, LOC383849, LOC383850
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216G10.bB6Ng01-216G10.g
ACCGA033101GA033102
length1,140815
definitionB6Ng01-216G10.b B6Ng01-216G10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcgaaatagcccctttaggaagcattcaattcatctctctcc
tgatttctctatttctaatattccaagtaatgatattttctcaataggaa
ttcaccatttaaatatggtgctaacaatatcaagtgacatccatctctag
ttatttccatggtataagttatggacatatccttggacaatatattatag
gaatgtaaaatgtatctgtcactgaggtttttattcataaccttctgttt
cagcctatgacttttgccttttacaattaattccttttattattattttt
caagtttattttatatatgtattaatcatatgttagcattatatcaactt
tgagatgaaacattttgagggaggaaggaaagatctctaaagatatactg
ctgctcattaaaaacaacatattaaatttaaacaaaaaaggttttgaggg
tagggatgttgatgcagctctagaaggagttatgggaaggagttacatgg
taaataagaaccaaatatattgtaggtaatactcaaaaattagtaaaatg
tttctttttaaaagataaaagcaatattaatattatcattgaccttttat
tttgtccaatatttggatagctacaattgggtctattttttttttctttt
ttttttcattttattagatattttctttatatttaaaatgttatccccat
tcctagtttcccctacaaaaatcccctatctccccctccccctgcttaca
aacacacccactcccacttcctagtcctggcattcccctatattggggca
tagaaccttcaacaggaccaagggcctctcttcccactgatgaccaaata
ggccatcctctgctacatatgcagctagagccatgagtctcatcatgtct
tttctttgggttgggttttagtccctgggaatctctggggttactgatca
gttcatattgtgttcctcattatgagtctgcaacctcttcagctcttgga
tatttttctctagcttcttcattggacctgtgctcatccattgatggctg
agagcatcactctgtacttgtcagcaaaggcagaggcctctagaaagata
gcttatataggtctcctggtcagcaaaccgtttagcatcc

gaattctttgtttagctctgtaacccatttttaattggtttattcagttt
tctgtgatctaactatctgagttctttgtatattttggaaattagccctc
taacagatgcagagttggtaaggatcttttcccattctgtaagtaactct
tttgttctattgacagtgtcctttaccttaaagaagcttttcattttcat
gagttaccacttgtcagttgttgatattagaacccgagccattggcattc
tgttcaggaaaatttcccctgtgcctatgtgttcaaggctctttcccact
tttctattagactcaatgtatctgtttttatgtggaggtatttgacccac
tagaacttgagctttttacaagaagataaaaatggatcaatttgcattct
tctacatgtagacggccagttagaacagaagcatttgtttaacatgctgg
ttttttttttccactacaatattttttggctttttttttttttttttttt
ttgtgaaagaacaagtaaacataagtatgtgcatttatttttgggtattc
agctttattccattgatctacatgtctgtctctataccaataccaagtgg
gttttggggttttttttttttttttttttgggtggttggttttggttttc
actattgctctgtaataaagcttgaggtcatggatggtgattcctccaaa
atttcttttaccgttgttaccattgtttttcgctatcctaagattttttg
ttattccagatgaaacttgaaaaaatttctttcccatctctgtggaataa
aagggttgggaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_46215181_46216326
seq2: B6Ng01-216G10.b_43_1182

seq1  GAATTCTCTCGAAATAGCCCCTTTAGGAAGCATTCAATTCATCTCTCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCGAAATAGCCCCTTTAGGAAGCATTCAATTCATCTCTCTCC  50

seq1  TGATTTCTCTATTTCTAATATTCCAAGTAATGATATTTTCTCAATAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCTCTATTTCTAATATTCCAAGTAATGATATTTTCTCAATAGGAA  100

seq1  TTCACCATTTAAATATGGTGCTAACAATATCAAGTGACATCCATCTCTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATTTAAATATGGTGCTAACAATATCAAGTGACATCCATCTCTAG  150

seq1  TTATTTCCATGGTATAAGTTATGGACATATCCTTGGACAATATATTATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCATGGTATAAGTTATGGACATATCCTTGGACAATATATTATAG  200

seq1  GAATGTAAAATGTATCTGTCACTGAGGTTTTTATTCATAACCTTCTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTAAAATGTATCTGTCACTGAGGTTTTTATTCATAACCTTCTGTTT  250

seq1  CAGCCTATGACTTTTGCCTTTTACAATTAATTCCTTTTATTATTATTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTATGACTTTTGCCTTTTACAATTAATTCCTTTTATTATTATTTTT  300

seq1  CAAGTTTATTTTATATATGTATTAATCATATGTTAGCATTATATCAACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTTATTTTATATATGTATTAATCATATGTTAGCATTATATCAACTT  350

seq1  TGAGATGAAACATTTTGAGGGAGGAAGGAAAGATCTCTAAAGATATACTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGAAACATTTTGAGGGAGGAAGGAAAGATCTCTAAAGATATACTG  400

seq1  CTGCTCATTAAAAACAACATATTAAATTTAAACAAAAAAGGTTTTGAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATTAAAAACAACATATTAAATTTAAACAAAAAAGGTTTTGAGGG  450

seq1  TAGGGATGTTGATGCAGCTCTAGAAGGAGTTATGGGAAGGAGTTACATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATGTTGATGCAGCTCTAGAAGGAGTTATGGGAAGGAGTTACATGG  500

seq1  TAAATAAGAACCAAATATATTGTAGGTAATACTCAAAAATTAGTAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGAACCAAATATATTGTAGGTAATACTCAAAAATTAGTAAAATG  550

seq1  TTTCTTTTTAAAAGATAAAAGCAATATTAATATTATCATTGACCTTTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTAAAAGATAAAAGCAATATTAATATTATCATTGACCTTTTAT  600

seq1  TTTGTCCAATATTTGGATAGCTACAATTGGGTCTATTTTTTTTTTCTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCAATATTTGGATAGCTACAATTGGGTCTATTTTTTTTTTCTTTT  650

seq1  TTTTTTCATTTTATTAGATATTTTCTTTATATTTAAAATGTTATCCCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCATTTTATTAGATATTTTCTTTATATTTAAAATGTTATCCCCAT  700

seq1  TCCTAGTTTCCCCTACAAAAATCCCCTATCTCCCCCTCCCCCTGCTTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTTTCCCCTACAAAAATCCCCTATCTCCCCCTCCCCCTGCTTACA  750

seq1  AACACACCCACTCCCACTTCCTAGTCCTGGCATTCCCCTATATTGGGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACCCACTCCCACTTCCTAGTCCTGGCATTCCCCTATATTGGGGCA  800

seq1  TAGAACCTTCAACAGGACCAAGGGCCTCTCTTCCCACTGATGACCAAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACCTTCAACAGGACCAAGGGCCTCTCTTCCCACTGATGACCAAATA  850

seq1  GGCCATCCTCTGCTACATATGCAGCTAGAGCCATGAGTCTCATCATGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATCCTCTGCTACATATGCAGCTAGAGCCATGAGTCTCATCATGTCT  900

seq1  TTTCTTT-GGTTGGGTTTTAGTCCCT-GGAATCTCTGGGGTTACTGATCA  948
      ||||||| |||||||||||||||||| |||||||||||||||||||||||
seq2  TTTCTTTGGGTTGGGTTTTAGTCCCTGGGAATCTCTGGGGTTACTGATCA  950

seq1  GTTCATATTGTTGTTCCTCA-TATGAGTCTGCAAACCTCTTCAGCTCCTT  997
      |||||||||| ||||||||| ||||||||||| ||||||||||||| |||
seq2  GTTCATATTG-TGTTCCTCATTATGAGTCTGC-AACCTCTTCAGCT-CTT  997

seq1  GGATA-TTTTCTCTAGCTTCTTCATTTGGGACCCTGTGCTCCATCCAATG  1046
      ||||| ||||||||||||||||||||  ||| |||||||| ||||| || 
seq2  GGATATTTTTCTCTAGCTTCTTCATT--GGA-CCTGTGCT-CATCC-ATT  1042

seq1  GATGGCTGAGAGCATCCACTTCTGTACTTGTCAGGCAAAGGCAGAGG-CT  1095
      ||||||||||||||| ||| ||||||||||||| ||||||||||||| ||
seq2  GATGGCTGAGAGCAT-CAC-TCTGTACTTGTCA-GCAAAGGCAGAGGCCT  1089

seq1  CTTAGAAGATAGC-TATATTAGTCTCCT-GTCAGCAAACTTTTTTTAGCA  1143
      ||   |||||||| |||||  ||||||| ||||||||||    |||||||
seq2  CTAGAAAGATAGCTTATATAGGTCTCCTGGTCAGCAAAC--CGTTTAGCA  1137

seq1  TCC  1146
      |||
seq2  TCC  1140


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