BAC Information

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BAC

Clone NameB6Ng01-217K24
Chromosome3 (Build37)
Map Location 11,987,120 - 12,125,138
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383826, EG667978, LOC667999
Downstream geneEG621965, LOC100039798, EG668033, LOC668037
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217K24.bB6Ng01-217K24.g
ACCGA034023GA034024
length204835
definitionB6Ng01-217K24.b B6Ng01-217K24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,124,935 - 12,125,138)(11,987,120 - 11,987,716)
sequence
cagatgaaagaattctaattctgtatttaaatgagtttttgaagccctgt
cttcctgaaacaggagctacttgagacttcctgttaaatctagctagttt
ttaatggacaaaaatgtaacagtggggcctagtgttaatgtaaaaatatt
tcaaaataagtttaaatatatatgtgtgtgtgtgtatgtgtgtgtgtgtg
tgtg

gaattcattgaattttgttgtgttaaagtcaacatcactgagggatcttt
tttcttttttctttataacttttatttttacagacatttgagggtcagtt
tgtttgtttgtttgtttgtttatttatttatttataagacattctgatta
tggtttcttcttccccaattcttccaagatcttacttacctcccaaccta
cccatatccacactttttttttcattagaaagcaagcagtgagaaaaaag
aaaacaaactaaattagaactaaaaaaaaaatttttaaactgaaaaataa
gaccaaaagaaaaagaccaattaacacatagtcttagtcacacccagata
gagaatcccataaaatcacaaaatcagaaaacataacatagaagcaaaag
actttaaggtaacaaaaagtgcccagacatggttttatgagaaaaaaaaa
aaaaatcaaccaaccaaaccacaacaacaacaaatccaacaaaacccaac
cccaaaacaaaacaaaacaaaattcttctaaaagtttaattgagtttatt
ttgtgctgggtatctagttttggtcatagggcctgtccatgtgggtccac
acagggtttgtttacacagtgagattccactggagaaaactatcttttca
ttcgtaagaagttatcactggtagatatcttctcagtgttgggacaacat
ctagtcttttgcatgtattatgcatgttgccacagtttctgtgagttcat
atgtatgtgtcagctgtttttctaaaattatgtgatggtagtgatgatga
tatgatgatgacaatgatgatgatgtcattatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_12124935_12125138
seq2: B6Ng01-217K24.b_48_251 (reverse)

seq1  CACACACACACACACACATACACACACACACATATATATTTAAACTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACATACACACACACACATATATATTTAAACTTATT  50

seq1  TTGAAATATTTTTACATTAACACTAGGCCCCACTGTTACATTTTTGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATTTTTACATTAACACTAGGCCCCACTGTTACATTTTTGTCCA  100

seq1  TTAAAAACTAGCTAGATTTAACAGGAAGTCTCAAGTAGCTCCTGTTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAACTAGCTAGATTTAACAGGAAGTCTCAAGTAGCTCCTGTTTCAG  150

seq1  GAAGACAGGGCTTCAAAAACTCATTTAAATACAGAATTAGAATTCTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGGGCTTCAAAAACTCATTTAAATACAGAATTAGAATTCTTTCA  200

seq1  TCTG  204
      ||||
seq2  TCTG  204


seq1: chr3_11987120_11987716
seq2: B6Ng01-217K24.g_63_659

seq1  GAATTCATTGAATTTTGTTGTGTTAAAGTCAACATCACTGAGGGATCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAATTTTGTTGTGTTAAAGTCAACATCACTGAGGGATCTTT  50

seq1  TTTCTTTTTTCTTTATAACTTTTATTTTTACAGACATTTGAGGGTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTCTTTATAACTTTTATTTTTACAGACATTTGAGGGTCAGTT  100

seq1  TGTTTGTTTGTTTGTTTGTTTATTTATTTATTTATAAGACATTCTGATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTGTTTGTTTATTTATTTATTTATAAGACATTCTGATTA  150

seq1  TGGTTTCTTCTTCCCCAATTCTTCCAAGATCTTACTTACCTCCCAACCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCTTCTTCCCCAATTCTTCCAAGATCTTACTTACCTCCCAACCTA  200

seq1  CCCATATCCACACTTTTTTTTTCATTAGAAAGCAAGCAGTGAGAAAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATATCCACACTTTTTTTTTCATTAGAAAGCAAGCAGTGAGAAAAAAG  250

seq1  AAAACAAACTAAATTAGAACTAAAAAAAAAATTTTTAAACTGAAAAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACTAAATTAGAACTAAAAAAAAAATTTTTAAACTGAAAAATAA  300

seq1  GACCAAAAGAAAAAGACCAATTAACACATAGTCTTAGTCACACCCAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAAAGAAAAAGACCAATTAACACATAGTCTTAGTCACACCCAGATA  350

seq1  GAGAATCCCATAAAATCACAAAATCAGAAAACATAACATAGAAGCAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCCCATAAAATCACAAAATCAGAAAACATAACATAGAAGCAAAAG  400

seq1  ACTTTAAGGTAACAAAAAGTGCCCAGACATGGTTTTATGAGAAAAAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAGGTAACAAAAAGTGCCCAGACATGGTTTTATGAGAAAAAAAAA  450

seq1  AAAAATCAACCAACCAAACCACAACAACAACAAATCCAACAAAACCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCAACCAACCAAACCACAACAACAACAAATCCAACAAAACCCAAC  500

seq1  CCCAAAACAAAACAAAACAAAATTCTTCTAAAAGTTTAATTGAGTTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAACAAAACAAAACAAAATTCTTCTAAAAGTTTAATTGAGTTTATT  550

seq1  TTGTGCTGGGTATCTAGTTTTGGTCATAGGGCCTGTCCATGTGGGTC  597
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCTGGGTATCTAGTTTTGGTCATAGGGCCTGTCCATGTGGGTC  597


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