BAC Information

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BAC

Clone NameB6Ng01-218B23
Chromosome3 (Build37)
Map Location 79,813,269 - 79,874,213
singlet/doubletdoublet
Overlap genenone
Upstream geneRapgef2, LOC100041741, LOC100041793, LOC667613, Ppid, Etfdh, 4930579G24Rik, Rxfp1, Tmem144, 1110032E23Rik
Downstream geneEG626797, Gria2, Glrb, EG626841, Pdgfc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218B23.bB6Ng01-218B23.g
ACCGA034335GA034336
length191922
definitionB6Ng01-218B23.b B6Ng01-218B23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(79,813,269 - 79,813,459)(79,873,666 - 79,874,213)
sequence
cagtttctgattgttaaatatgtggaaggaagtgtggatagagaccagga
aattagaagggttcaagaaaaagcaaaatagctttaaaggactggggtga
agagtccaataggatgtgtacgatatgaaattagctgagacaatgctgag
gaaaagggctatggctgagagaggagatggggggtggggag
gaattcatttactttccacctatatgaaatcacaaacaactgactgttct
ccacctcccttcacactcatacaaaaccaccagctcccaagagtggagat
caggtcagctgaactacatcacagggccacagggccacagggccacaggg
ccacaggaccacagggacacagggacacagggacacagggacacagggac
acagggacacagagccacagggccacagggccacagggccacagagccag
gtgtgccagctcctaagtgagggttgcattagttgctttgctcattgctg
gaaccaaatacctgataaaaggccatttctggaagaaaaaaataaaagat
ctcttttggcttcctgcttgagagggtggtacccatcatgctggggatgg
aatggcagtaggagggcctcgaagcttaggtgggaacttgcagataacat
ctgggtagactgcaagtcatagaaagggcaaatgctggtgctggtgcttg
ccagctcttctccctctctagctttgattccatccaagtctatgagagga
tgtcttagttactcttctactgttgggaagagacaccatggccaaggtaa
tttctaaaggaaagcatttaattgggagctcacagcttcagatggtgaga
aaatggccatcgcaatgggagcgtggcagcaggcagggagctgtagctga
gaacttacatcctggttcacaggcatgagacagagagagagctaagaggg
agctaagtgagctcttgaactctcagagccacccctacccccagtaacac
acctcctccaacaaggacacactcccaaagtaacacaccttccaagagca
gttctaccatccagagaccaatgattgaagtatatgagcctataggaact
ttgttggttagttttgtgtcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_79813269_79813459
seq2: B6Ng01-218B23.b_50_240

seq1  CAGTTTCTGATTGTTAAATATGTGGAAGGAAGTGTGGATAGAGACCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTGATTGTTAAATATGTGGAAGGAAGTGTGGATAGAGACCAGGA  50

seq1  AATTAGAAGGGTTCAAGAAAAAGCAAAATAGCTTTAAAGGACTGGGGTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAAGGGTTCAAGAAAAAGCAAAATAGCTTTAAAGGACTGGGGTGA  100

seq1  AGAGTCCAATAGGATGTGTACGATATGAAATTAGCTGAGACAATGCTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCCAATAGGATGTGTACGATATGAAATTAGCTGAGACAATGCTGAG  150

seq1  GAAAAGGGCTATGGCTGAGAGAGGAGATGGGGGGTGGGGAG  191
      |||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGGCTATGGCTGAGAGAGGAGATGGGGGGTGGGGAG  191

seq1: chr3_79873666_79874213
seq2: B6Ng01-218B23.g_66_613 (reverse)

seq1  CTCTCATAGACTTGGATGGAATCAAAGCTAGAGAGGGAGAAGAGCTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATAGACTTGGATGGAATCAAAGCTAGAGAGGGAGAAGAGCTGGCA  50

seq1  AGCACCAGCACCAGCATTTGCCCTTTCTATGACTTGCAGTCTACCCAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCAGCACCAGCATTTGCCCTTTCTATGACTTGCAGTCTACCCAGAT  100

seq1  GTTATCTGCAAGTTCCCACCTAAGCTTCGAGGCCCTCCTACTGCCATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTGCAAGTTCCCACCTAAGCTTCGAGGCCCTCCTACTGCCATTCC  150

seq1  ATCCCCAGCATGATGGGTACCACCCTCTCAAGCAGGAAGCCAAAAGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGCATGATGGGTACCACCCTCTCAAGCAGGAAGCCAAAAGAGAT  200

seq1  CTTTTATTTTTTTCTTCCAGAAATGGCCTTTTATCAGGTATTTGGTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTTTTTCTTCCAGAAATGGCCTTTTATCAGGTATTTGGTTCCA  250

seq1  GCAATGAGCAAAGCAACTAATGCAACCCTCACTTAGGAGCTGGCACACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAGCAAAGCAACTAATGCAACCCTCACTTAGGAGCTGGCACACCT  300

seq1  GGCTCTGTGGCCCTGTGGCCCTGTGGCCCTGTGGCTCTGTGTCCCTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGTGGCCCTGTGGCCCTGTGGCCCTGTGGCTCTGTGTCCCTGTGT  350

seq1  CCCTGTGTCCCTGTGTCCCTGTGTCCCTGTGTCCCTGTGGTCCTGTGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTCCCTGTGTCCCTGTGTCCCTGTGTCCCTGTGGTCCTGTGGCC  400

seq1  CTGTGGCCCTGTGGCCCTGTGGCCCTGTGATGTAGTTCAGCTGACCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCCCTGTGGCCCTGTGGCCCTGTGATGTAGTTCAGCTGACCTGAT  450

seq1  CTCCACTCTTGGGAGCTGGTGGTTTTGTATGAGTGTGAAGGGAGGTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTCTTGGGAGCTGGTGGTTTTGTATGAGTGTGAAGGGAGGTGGAG  500

seq1  AACAGTCAGTTGTTTGTGATTTCATATAGGTGGAAAGTAAATGAATTC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCAGTTGTTTGTGATTTCATATAGGTGGAAAGTAAATGAATTC  548