BAC Information

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BAC

Clone NameB6Ng01-218K20
Chromosome3 (Build37)
Map Location 82,848,431 - 82,849,605
singlet/doubletsinglet
Overlap geneFgb
Upstream geneGucy1b3, Gucy1a3, Mtap9, Npy2r, LOC100041940, EG633285, Lrat, Fgg, Fga
Downstream genePlrg1, EG627094, Dchs2, 1700028M03Rik, LOC100042007, LOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218K20.bB6Ng01-218K20.g
ACCGA034741GA034742
length1,1671,206
definitionB6Ng01-218K20.b B6Ng01-218K20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatcacgtgaactacagagctccttttatctcctgttcctacaa
atagagcacacaggatgaagaaacttctccatctttcctttccatggcct
tgccatctgttcacacaagcacacgcatacacacattagagacccctgaa
atgcccaccctcattatattataatcggctcagcagaacggggtggagtt
gttagtcaaggcagaatatgacatgcccaggatataaccatgatatacta
gaatattattacattctgctggggaaaagctactctgctcactttttagt
ccctatgtttaaaggaggttagatcttcaggaagtctatggaaatgtatt
cactaactagttacctttcccagacaccactggaatgttgcagctgacag
tgcatggagtgcggcagtattccatttgagctgagatgtcagactctaat
ttttgtattttgcttctcaggtcctccaggattgagcggagcacacgaag
attaagggggatattatcattcacagtctcatcaatatataatctctgat
cttccaggatggaggagtactcatttatgacattttcattctctggaaag
ccaaaatgatacaggagtggtcagcatatttgcctataaaaggatatcta
actacatcaatatgattttgattctctgagaataaacttaaatactttgg
ggtgccactaagcaatcgtgactgctgaactttagaggcatatttttgtt
tgtttgtttgtttcttcctttcatggcatgtataaattggcatgcagttc
acctacttactactccagtgatttgtcctaggtgcacacaagtcatgtct
tactttgggagcagtactgaaggctccatctcatagcattgcagagaaga
ggcagttggcactcgcacaccccatgggtactgcaaagccttaggattta
cagaacacttctgaattcatttgatgcctaactgtgtgtctaccccttgg
gtgtgctgctctctgaaaagcctgtgccatgtgacaccccactgaattcc
cacccacagcccgtagccctcaagatttgtatgccagatgtcacctgctt
acagatatatccacactgatgattctcatatcagtactctcagaattgat
acctacaatactagttt
gaattccaactaccaggcagggcatggccactgcactcttgaactcttgg
cagctatggttagctgcataaattccacactcatctcaatcaatatggct
acctaaacaaggacctatacaataacaataccatttgacatgctgcattt
tgctgtacaaaatgttccccaagttgcagtagtggcactatagcttgggc
atagccaacaggcacctaattggacataaggcccactgaataggaggaaa
cctatgcctagtactgtaaaattggccagatacctgtggctgaagaggtc
atggatcctagaggaacccctcctcctgctcctgttctaaacagtataat
tcctaactgcattctaaagacctatgcttatacccacagagaactacagt
ccctacttcacatcacagaagcttctttcggcccagatgaaaatctttaa
agaaagccacagtggattacaatacagaaaacttaccatggggtctccaa
ctccaactgatgcatcaacaacacaacccatacacctaagtcccagaaag
tatcatggaaggggttcagaaagcttgtaagagccagaggaccagatgcc
tgctgtgagatagcatcttccagatatgtcaggaattccacacccatgaa
atctcatctcagtcaatatggctacctagggacctgcacaatgacaatac
catttgatatgctaatgtggatgagagaaatctcacaaggtccctcctca
aaatgaagagctacaggcaactgatgggtgctgggagaggaaggatcagg
cctcgccggggacaagccctctgattggttatccaaccacaaggcgtcag
ccctaagtacatccgtgtacaagcaactcaaaaggactgcaggatgtatt
tatatatgcatagattgtaacaatattattacaagaagaagggtcatgaa
ttgaaaaaagaaggtgggggggcttcagaggaacttgaggaaaaggagta
aggtgaaattgatgttaatagtgttcgtgtataaaatttcttaattaaaa
aaaaaaatgtaggaaggtgtcattgagctcgtgacacattgcttttccag
tcagcattggtcttgcagcctaacccattgtcttgacctatctgaggatc
acttcattgaattccataagaagaactatgaccgtggaactcggggtggt
atatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_82848431_82849605
seq2: B6Ng01-218K20.b_46_1212

seq1  GAATTCTATCACGTGAACTACAGAGCTCCTTTTATCTCCTGTTCCTACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCACGTGAACTACAGAGCTCCTTTTATCTCCTGTTCCTACAA  50

seq1  ATAGAGCACACAGGATGAAGAAACTTCTCCATCTTTCCTTTCCATGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGCACACAGGATGAAGAAACTTCTCCATCTTTCCTTTCCATGGCCT  100

seq1  TGCCATCTGTTCACACAAGCACACGCATACACACATTAGAGACCCCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATCTGTTCACACAAGCACACGCATACACACATTAGAGACCCCTGAA  150

seq1  ATGCCCACCCTCATTATATTATAATCGGCTCAGCAGAACGGGGTGGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCACCCTCATTATATTATAATCGGCTCAGCAGAACGGGGTGGAGTT  200

seq1  GTTAGTCAAGGCAGAATATGACATGCCCAGGATATAACCATGATATACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTCAAGGCAGAATATGACATGCCCAGGATATAACCATGATATACTA  250

seq1  GAATATTATTACATTCTGCTGGGGAAAAGCTACTCTGCTCACTTTTTAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTATTACATTCTGCTGGGGAAAAGCTACTCTGCTCACTTTTTAGT  300

seq1  CCCTATGTTTAAAGGAGGTTAGATCTTCAGGAAGTCTATGGAAATGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTATGTTTAAAGGAGGTTAGATCTTCAGGAAGTCTATGGAAATGTATT  350

seq1  CACTAACTAGTTACCTTTCCCAGACACCACTGGAATGTTGCAGCTGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAACTAGTTACCTTTCCCAGACACCACTGGAATGTTGCAGCTGACAG  400

seq1  TGCATGGAGTGCGGCAGTATTCCATTTGAGCTGAGATGTCAGACTCTAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGAGTGCGGCAGTATTCCATTTGAGCTGAGATGTCAGACTCTAAT  450

seq1  TTTTGTATTTTGCTTCTCAGGTCCTCCAGGATTGAGCGGAGCACACGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTATTTTGCTTCTCAGGTCCTCCAGGATTGAGCGGAGCACACGAAG  500

seq1  ATTAAGGGGGATATTATCATTCACAGTCTCATCAATATATAATCTCTGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGGGGGATATTATCATTCACAGTCTCATCAATATATAATCTCTGAT  550

seq1  CTTCCAGGATGGAGGAGTACTCATTTATGACATTTTCATTCTCTGGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGGATGGAGGAGTACTCATTTATGACATTTTCATTCTCTGGAAAG  600

seq1  CCAAAATGATACAGGAGTGGTCAGCATATTTGCCTATAAAAGGATATCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGATACAGGAGTGGTCAGCATATTTGCCTATAAAAGGATATCTA  650

seq1  ACTACATCAATATGATTTTGATTCTCTGAGAATAAACTTAAATACTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATCAATATGATTTTGATTCTCTGAGAATAAACTTAAATACTTTGG  700

seq1  GGTGCCACTAAGCAATCGTGACTGCTGAACTTTAGAGGCATATTTTTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCACTAAGCAATCGTGACTGCTGAACTTTAGAGGCATATTTTTGTT  750

seq1  TGTTTGTTTGTTTCTTCCTTTCATGGCATGTATAAATTGGCATGCAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTCTTCCTTTCATGGCATGTATAAATTGGCATGCAGTTC  800

seq1  ACCTACTTACTACTCCAGTGATTTGTCCTAGGTGCACACAAGTCATGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACTTACTACTCCAGTGATTTGTCCTAGGTGCACACAAGTCATGTCT  850

seq1  TACTTTGGGAGCAGTACTGAAGGCTCCATCTCATAGCATTGCAGAGAAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTGGGAGCAGTACTGAAGGCTCCATCTCATAGCATTGCAGAGAAGA  900

seq1  GGCAGTTGGCACTCGCACACCCCATGGGTACTGCAAAGCCTTAGGATTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTGGCACTCGCACACCCCATGGGTACTGCAAAGCCTTAGGATTTA  950

seq1  CAAGAACACTTCTGAATTCATTTGATGCCTAACTGTGTGTCTA-CCCTTG  999
      | ||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  C-AGAACACTTCTGAATTCATTTGATGCCTAACTGTGTGTCTACCCCTTG  999

seq1  GGTGTGCTGCTCTCTGAAAAGCCTGTGCCATGTGACACCCCAACTG-ATT  1048
      ||||||||||||||||||||||||||||||||||||||||| |||| |||
seq2  GGTGTGCTGCTCTCTGAAAAGCCTGTGCCATGTGACACCCC-ACTGAATT  1048

seq1  CCCACCCACCAGGCCCGTAGCCCTCAAGATTTGTATGCCAGATGTCA-CT  1097
      |||||||||   ||||||||||||||||||||||||||||||||||| ||
seq2  CCCACCCAC--AGCCCGTAGCCCTCAAGATTTGTATGCCAGATGTCACCT  1096

seq1  GCTTACAGATTAATAT-CACACTGATGGTTCTCATATTCAGTACTCTCAG  1146
      ||||||||||  |||| |||||||||| |||||||| |||||||||||| 
seq2  GCTTACAGAT--ATATCCACACTGATGATTCTCATA-TCAGTACTCTCA-  1142

seq1  GTATTGAGTACCTTACAAATACTAAGTTT  1175
      | ||||| |||| ||| |||||| |||||
seq2  GAATTGA-TACC-TAC-AATACT-AGTTT  1167