BAC Information

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BAC

Clone NameB6Ng01-219D09
Chromosome3 (Build37)
Map Location 119,906,181 - 119,907,314
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219D09.bB6Ng01-219D09.g
ACCGA035119GA035120
length921,142
definitionB6Ng01-219D09.b B6Ng01-219D09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacaacaaaaacaacataaaccatgcaaactcatgtaaacttaa
caactctttgctcaatgatcactggaatgggggggggggggg

gaattcaggtcataaaccttggtagcaaatgacttcactcaataagccat
ctcaatgtccctcaactcctttaaaagccaccagtctttgcctggggttg
taccctgacagcattatctaatatcaaccagctcctcaaagccttactta
aaaactctaatctggttaaattttcatcttcttcataaattagtggtaac
tgtcctccaacatgagtttcagagggaagactcacctcgtcggatttctg
gccccatggggatctgcgctgctcctcatggttgtctacagtctatggcc
cttctgagttacagtgattcaagggatagttcttcggacagaggctctca
ttgattccacaatcaccttgagaaaatgggaataaacccaactgttaaag
gttaccaacaaatgagaagagggccagaaaacacctgagctcttgagttt
gttgacttaaccaatataggaactccctctacccaatgtatttatatact
gtaaagaacataataatgaatatctttattactaaaaaatacagttaatt
gccttaataatgactatctcacagtgaactgacagctggtgatcctgcca
aatgtattagcaatgtagaattggttgcttaattctttcctgtctcccta
attggaagagcaaacttacattttatgacctggtctccctgcttatctcc
ctgtactcttagctaatttgctgtggttataagtttgatattacaccccc
cgcccccaacacacacacacacacacacacacacacacactcacacttct
tcacacaagtagtggtttgtttctattaagacataaatacaccttaggaa
gaattttcatagagcctgctagacaaaattttactcttataatatctaca
ttttgttctagttcttggcaatggcactagtacttctaactactctgaat
gataatatttagtcttcatgtgccatgtgctaggcactgtaataggtttt
atttacctgttcacagatctatgtatcaattttgcagtgttggaaaattg
acccagggccttcccaaatgtacctctaccattctgagctgcatcctcag
gacctgcgaatagttcatttctccggtggagttattttcacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119906181_119907314
seq2: B6Ng01-219D09.g_67_1208 (reverse)

seq1  CGTG-AAATAACTC--ACGAGGAAATG-ACTA-TCGCAGGT-CTGGAGAT  44
      |||| |||||||||   ||  |||||| |||| |||||||| |||  |||
seq2  CGTGAAAATAACTCCACCGGAGAAATGAACTATTCGCAGGTCCTGAGGAT  50

seq1  GCAGCTCAG-ATGGTAGA-GTACATTTGGGAA-GCCCTGGGTTCAATTTT  91
      ||||||||| |||||||| ||||||||||||| |||||||| ||||||||
seq2  GCAGCTCAGAATGGTAGAGGTACATTTGGGAAGGCCCTGGG-TCAATTTT  99

seq1  -CAACACTGCAAAATTGATACATAGATCTGTGAACAGGTAAATAAAACCT  140
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACACTGCAAAATTGATACATAGATCTGTGAACAGGTAAATAAAACCT  149

seq1  ATTACAGTGCCTAGCACATGGCACATGAAGACTAAATATTATCATTCAGA  190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAGTGCCTAGCACATGGCACATGAAGACTAAATATTATCATTCAGA  199

seq1  GTAGTTTAGAAGTACTAGTGCCATTGCCAAGAACTAGAACAAAATGTAGA  240
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAG-TTAGAAGTACTAGTGCCATTGCCAAGAACTAGAACAAAATGTAGA  248

seq1  TATTATAAGAGTAAAATTTTGTCTAGCAGGCTCTATGAAAATTCTTCCTA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATAAGAGTAAAATTTTGTCTAGCAGGCTCTATGAAAATTCTTCCTA  298

seq1  AGGTGTATTTATGTCTTAATAGAAACAAACCACTACTTGTGTGAAGAAGT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTATTTATGTCTTAATAGAAACAAACCACTACTTGTGTGAAGAAGT  348

seq1  GTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGGGCGGGGGGT  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGGGGGCGGGGGGT  398

seq1  GTAATATCAAACTTATAACCACAGCAAATTAGCTAAGAGTACAGGGAGAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATATCAAACTTATAACCACAGCAAATTAGCTAAGAGTACAGGGAGAT  448

seq1  AAGCAGGGAGACCAGGTCATAAAATGTAAGTTTGCTCTTCCAATTAGGGA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGGAGACCAGGTCATAAAATGTAAGTTTGCTCTTCCAATTAGGGA  498

seq1  GACAGGAAAGAATTAAGCAACCAATTCTACATTGCTAATACATTTGGCAG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGAAAGAATTAAGCAACCAATTCTACATTGCTAATACATTTGGCAG  548

seq1  GATCACCAGCTGTCAGTTCACTGTGAGATAGTCATTATTAAGGCAATTAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACCAGCTGTCAGTTCACTGTGAGATAGTCATTATTAAGGCAATTAA  598

seq1  CTGTATTTTTTAGTAATAAAGATATTCATTATTATGTTCTTTACAGTATA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTTTTTAGTAATAAAGATATTCATTATTATGTTCTTTACAGTATA  648

seq1  TAAATACATTGGGTAGAGGGAGTTCCTATATTGGTTAAGTCAACAAACTC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATACATTGGGTAGAGGGAGTTCCTATATTGGTTAAGTCAACAAACTC  698

seq1  AAGAGCTCAGGTGTTTTCTGGCCCTCTTCTCATTTGTTGGTAACCTTTAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCTCAGGTGTTTTCTGGCCCTCTTCTCATTTGTTGGTAACCTTTAA  748

seq1  CAGTTGGGTTTATTCCCATTTTCTCAAGGTGATTGTGGAATCAATGAGAG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGGTTTATTCCCATTTTCTCAAGGTGATTGTGGAATCAATGAGAG  798

seq1  CCTCTGTCCGAAGAACTATCCCTTGAATCACTGTAACTCAGAAGGGCCAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCCGAAGAACTATCCCTTGAATCACTGTAACTCAGAAGGGCCAT  848

seq1  AGACTGTAGACAACCATGAGGAGCAGCGCAGATCCCCATGGGGCCAGAAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTAGACAACCATGAGGAGCAGCGCAGATCCCCATGGGGCCAGAAA  898

seq1  TCCGACGAGGTGAGTCTTCCCTCTGAAACTCATGTTGGAGGACAGTTACC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGACGAGGTGAGTCTTCCCTCTGAAACTCATGTTGGAGGACAGTTACC  948

seq1  ACTAATTTATGAAGAAGATGAAAATTTAACCAGATTAGAGTTTTTAAGTA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTATGAAGAAGATGAAAATTTAACCAGATTAGAGTTTTTAAGTA  998

seq1  AGGCTTTGAGGAGCTGGTTGATATTAGATAATGCTGTCAGGGTACAACCC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTGAGGAGCTGGTTGATATTAGATAATGCTGTCAGGGTACAACCC  1048

seq1  CAGGCAAAGACTGGTGGCTTTTAAAGGAGTTGAGGGACATTGAGATGGCT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAAGACTGGTGGCTTTTAAAGGAGTTGAGGGACATTGAGATGGCT  1098

seq1  TATTGAGTGAAGTCATTTGCTACCAAGGTTTATGACCTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAGTGAAGTCATTTGCTACCAAGGTTTATGACCTGAATTC  1142


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