BAC Information

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BAC

Clone NameB6Ng01-219G20
Chromosome3 (Build37)
Map Location 120,464,052 - 120,465,153
singlet/doubletsinglet
Overlap genenone
Upstream genePtbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1, Cnn3, Slc44a3, A730020M07Rik, 4930432M17Rik, F3, Abcd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219G20.bB6Ng01-219G20.g
ACCGA035267GA035268
length1,106846
definitionB6Ng01-219G20.b B6Ng01-219G20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttggataaaccaaatgacgttagaactggtcctgagcaaaagg
ttaagttcttgtaaagaccgcaattggattttcgcttaatctgtaaaaag
cgcctttatctgttttgtttttttcctctaaattttgctgtctctcctaa
ttagctgtaccttggagggaattttctgttctttctcagtcttttaaggg
gaccgtgtgggtgacatttagaataatcagagtaggcaagagtgaagctt
tgttgtcgtttctacttgctaacaattccgagttctgaaaagtctggccc
atgcagtgaaaagtttgtgtgcttagtgagatggtgtccaattgggcaat
cttctaggtcttgggaaatgtcctagaagcttggcaagaagttgttctca
tgagaacacgagtgctgccaatttccaattggccaagacacattatatgg
acagctttccctctgagcaggcaggcagttccactccaactggaatctgc
aatgcaaagatgcacaggggagaaagattaaacaaaacttctcagattgc
cagtccaggtgaatctttcatcctatctagtctgctgcaatttccttttg
atcatcaaccatttaaaatattaggggacagtgggcatcctgtgggttag
tttttaggattgatcaaaagccaaggcgcacaccagatgagtgaactcag
gtctctttttatacatatgcaaactattgaacctgccagaatggttcaaa
atttagatctgctctgtgaggcaacctgcctgtcagcttggccctggctc
aaatggtgcccacccttcatgcagtttaggagaaatggtgacagctgtgt
tctttgcctgactgcttccatttatgaaaacatgagggtaaatggtagac
actcccataggcccctttaccgtgaattcttttctagccacagccaagag
taaaaaggtcctaatagaactgagcagcagtcatctatagcgtacctcaa
gtaagttgaatacaagttttattttaaaaagagcccataaattaatatct
tatctatctatctctaactgaattttttcttttttctttttataattggt
attatt

gaattctttgtttagctctgttcccatttttaaatagagttatttggttc
tctggagtctaacttcttgagttctttgtatattttggatgttagccctc
tattggatgtaggattggtaaagctattttcccaatctgttggttggtat
tttgtattatttacagtgtcttttgcctttaagaagctttgcaactttat
gaggtcccattcttgatcatagactataagcctttgttgttctgttcagg
aaattatactctgtgtcgatgtgttagagccttttccccatgttctcttc
tattggattcagtgtatctggttttatgtggaagtctttgatccacttgg
acttgacctttgtacgtggagataagaattggtcaatttgcattcttcta
cacatttactgccagttgaacaaataagatatgttgaaaatgctgtcttt
ttcccataataagccaccaaacgcagacactattgcatatgccagcaaga
ttttgctgaaaggatcctgatatagctgtctcttgtgaggctatgccagt
gcctggcaaatacagaagtggatgctcacagtcatctataggatggaaca
cagggcccccaatggaggaattagagaaagtatacaatgagctgaagggg
tctgcagccctataggtggaacaacaatatgaactaatcagtacccctga
gctcgtgtctctagctgcatatgtagcagaagatggcctagtcggccatc
attgggaagagaggccccttggtcttgcaaactttatatgccccagtaca
ggggaatgccaggaacaagaggtgggagtgggtgtgtaggggagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_120464052_120465153
seq2: B6Ng01-219G20.b_46_1151 (reverse)

seq1  AATAA-------TAAAAAAAGAAAAAAGAAAAAAATACAGTTAGGAGATA  43
      |||||       || ||||||||||||| ||||||| |||||| ||||||
seq2  AATAATACCAATTATAAAAAGAAAAAAG-AAAAAATTCAGTTA-GAGATA  48

seq1  GATAGAT-AGATATTTAATTTATTGGGCTCTTTTTTAAAATAAAAACTGT  92
      ||||||| ||||| |||||||| ||||||| ||||||||||||||  |||
seq2  GATAGATAAGATA-TTAATTTA-TGGGCTC-TTTTTAAAATAAAACTTGT  95

seq1  ATTCAACTTACTTGAGGTACGCTATAGATGACTGCTGCTCAGTTCTATTA  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTTACTTGAGGTACGCTATAGATGACTGCTGCTCAGTTCTATTA  145

seq1  GGACC-TTTTACTCTTGGCTGTGGCTAGAAAAGAATTCACGGTAAAGGGG  191
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTTTTACTCTTGGCTGTGGCTAGAAAAGAATTCACGGTAAAGGGG  195

seq1  CCTATGGGAGTGTCTACCATTTACCCTCATGTTTTCATAAATGGAAGCAG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGGGAGTGTCTACCATTTACCCTCATGTTTTCATAAATGGAAGCAG  245

seq1  TCAGGCAAAGAACACAGCTGTCACCATTTCTCCTAAACTGCATGAAGGGT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAAAGAACACAGCTGTCACCATTTCTCCTAAACTGCATGAAGGGT  295

seq1  GGGCACCATTTGAGCCAGGGCCAAGCTGACAGGCAGGTTGCCTCACAGAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCACCATTTGAGCCAGGGCCAAGCTGACAGGCAGGTTGCCTCACAGAG  345

seq1  CAGATCTAAATTTTGAACCATTCTGGCAGGTTCAATAGTTTGCATATGTA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTAAATTTTGAACCATTCTGGCAGGTTCAATAGTTTGCATATGTA  395

seq1  TAAAAAGAGACCTGAGTTCACTCATCTGGTGTGCGCCTTGGCTTTTGATC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAGACCTGAGTTCACTCATCTGGTGTGCGCCTTGGCTTTTGATC  445

seq1  AATCCTAAAAACTAACCCACAGGATGCCCACTGTCCCCTAATATTTTAAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTAAAAACTAACCCACAGGATGCCCACTGTCCCCTAATATTTTAAA  495

seq1  TGGTTGATGATCAAAAGGAAATTGCAGCAGACTAGATAGGATGAAAGATT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGATGATCAAAAGGAAATTGCAGCAGACTAGATAGGATGAAAGATT  545

seq1  CACCTGGACTGGCAATCTGAGAAGTTTTGTTTAATCTTTCTCCCCTGTGC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGGACTGGCAATCTGAGAAGTTTTGTTTAATCTTTCTCCCCTGTGC  595

seq1  ATCTTTGCATTGCAGATTCCAGTTGGAGTGGAACTGCCTGCCTGCTCAGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGCATTGCAGATTCCAGTTGGAGTGGAACTGCCTGCCTGCTCAGA  645

seq1  GGGAAAGCTGTCCATATAATGTGTCTTGGCCAATTGGAAATTGGCAGCAC  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGCTGTCCATATAATGTGTCTTGGCCAATTGGAAATTGGCAGCAC  695

seq1  TCGTGTTCTCATGAGAACAACTTCTTGCCAAGCTTCTAGGACATTTCCCA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTTCTCATGAGAACAACTTCTTGCCAAGCTTCTAGGACATTTCCCA  745

seq1  AGACCTAGAAGATTGCCCAATTGGACACCATCTCACTAAGCACACAAACT  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTAGAAGATTGCCCAATTGGACACCATCTCACTAAGCACACAAACT  795

seq1  TTTCACTGCATGGGCCAGACTTTTCAGAACTCGGAATTGTTAGCAAGTAG  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGCATGGGCCAGACTTTTCAGAACTCGGAATTGTTAGCAAGTAG  845

seq1  AAACGACAACAAAGCTTCACTCTTGCCTACTCTGATTATTCTAAATGTCA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGACAACAAAGCTTCACTCTTGCCTACTCTGATTATTCTAAATGTCA  895

seq1  CCCACACGGTCCCCTTAAAAGACTGAGAAAGAACAGAAAATTCCCTCCAA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACGGTCCCCTTAAAAGACTGAGAAAGAACAGAAAATTCCCTCCAA  945

seq1  GGTACAGCTAATTAGGAGAGACAGCAAAATTTAGAGGAAAAAAACAAAAC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACAGCTAATTAGGAGAGACAGCAAAATTTAGAGGAAAAAAACAAAAC  995

seq1  AGATAAAGGCGCTTTTTACAGATTAAGCGAAAATCCAATTGCGGTCTTTA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAAGGCGCTTTTTACAGATTAAGCGAAAATCCAATTGCGGTCTTTA  1045

seq1  CAAGAACTTAACCTTTTGCTCAGGACCAGTTCTAACGTCATTTGGTTTAT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACTTAACCTTTTGCTCAGGACCAGTTCTAACGTCATTTGGTTTAT  1095

seq1  CCAAAGAATTC  1102
      |||||||||||
seq2  CCAAAGAATTC  1106


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