BAC Information

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BAC

Clone NameB6Ng01-219L02
Chromosome3 (Build37)
Map Location 21,347,043 - 21,348,208
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665094
Downstream geneLOC100040325, 7530428D23Rik, LOC100039465, LOC100040353, Tbl1xr1, LOC545506
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219L02.bB6Ng01-219L02.g
ACCGA035456GA035457
length1,1671,171
definitionB6Ng01-219L02.b B6Ng01-219L02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagcagagtaatatggaatggttgaaaagcatctaagaaaatg
ttcaacattcttagtcatcagggaaatacaaatcaaaactaccctgagat
tccacttcataccaataagaatgactatgatcaaaaactcagggggcagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgctggtg
ggattgcaagctggtacaaccactctggaaatcagtttggcagttcctca
gaaaattggacatagtactacctgaggatccagctataccactcctgggc
atatacccagaaggtgttccaacatgtaataaggatacatgcaccactat
gttcatagcagccacatttataatagaagctggaaacaacccagatgtac
ctcaacagagggatacagaaaatgtggtgcatttacacaatgaaatacta
ctcagctattaaaaacaatgacttcatgaaattcacatgcaaatggatgg
aacttgaaaatatcatcctgagtgagataactcagtcagaaaaggacaca
cacgatatgcactcactgataaatggatattagcccaaaagttcagaata
cctaagattcaatttgcagtccatgtgaaggaagaccaaaatctggatgc
ttcagagcttcttagaagggtaaactaaatactcacaggagggaatatgg
agactaagtgtgaagcagagactgaaggaaaggccatccagagagttccc
cacctggagatctatcccatatacagccacaaaactttgatgctattgtt
gatgctgggaagtgcttgctgatataagcatgatatggctgtctcctgag
atgctcttccagagcctgacaaatacagaggaggatgcttgaatccagca
attggactaaagggcagaagtccctgatggtggagttagagaagagattg
aaggagctgaggaggtttgcagcctccattggagggagcaacagtgttca
ccaggccagacccatcggtgtttcatggaactggatcaccagcaataata
cacatgggagactcaatgacactgcacattatggtgcagagatgtcttgt
ggacatcttgggcagattagccttggccatgaaggtttggaattcctata
cagggtaagggcaggga
gaattctctgaggatctcagagtggaatctttgataagcccagctctgag
agaccattcataacaattatgtttctgtatttctgccaggagagagatcc
gcaaatgttttatcagttggcttcataaaaatatcgtccacagtgaaagc
cagaacaagactactgacttcttggaagactgacccagcctgtttcactt
cagagcatgtctcattctttactggaactcctgcttgaaaaatgtgttgc
cactcaggtacggctgacagcttttcagcatttgtgagaatagcaagtta
cagatgctccagggtctttgaagtgaatgccttttattgttgttaatact
caagatgtggtgcatcaagggttgctagactgaagtttttttccacccct
cacctgctaacacctcttgttcaaacccatactcacaatggtctgttcgt
tccattctttgttgtcacccaagcaatctgaatgttgaaaggtgcattac
aaaggatctgacctgatgtccaaaatagactataaagtagacagggaaga
acatgaattgtctatctcaaggcccttcaaggaactctcttgaaaagtgt
taattatgaaacatggatacagaatgctaattaattttctgtcctcccat
aagaagtttcataatctttctcaatacaatattccaggcagccatctcca
gagaatctgcagcaggaaaaacattacagtctcttcttgcccctctttct
gacttcagcaatatggatgttgaatcctgggacataaataataaaccata
ctaatgtgaattctttttctttaattgagaagcatcatacttacctgaga
ctgaggctggcttgaactctgggaccctccagactgagatacagaatttt
gccacaaggctttttcctctagttcttagaatgggaccctgaaccctgtg
caatgctaggcaggccccagcaacaactgggtatttttttttaaaagttt
gtttcagaaactacatgagagccatttatttcagactcttatcccttcca
cctcctctgctcttctgctccagtttccaagctgaatactggtacggaca
ggtgaagagaaacctggacaggagctttctgtttaggaattcagatatcc
taaggaactctggtccactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_21347043_21348208
seq2: B6Ng01-219L02.g_72_1242

seq1  GAATTCTCTGAGGATCTCAGAGTGGAATCTTTGATAAGCCCAGCTCTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGAGGATCTCAGAGTGGAATCTTTGATAAGCCCAGCTCTGAG  50

seq1  AGACCATTCATAACAATTATGTTTCTGTATTTCTGCCAGGAGAGAGATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCATTCATAACAATTATGTTTCTGTATTTCTGCCAGGAGAGAGATCC  100

seq1  GCAAATGTTTTATCAGTTGGCTTCATAAAAATATCGTCCACAGTGAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATGTTTTATCAGTTGGCTTCATAAAAATATCGTCCACAGTGAAAGC  150

seq1  CAGAACAAGACTACTGACTTCTTGGAAGACTGACCCAGCCTGTTTCACTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAAGACTACTGACTTCTTGGAAGACTGACCCAGCCTGTTTCACTT  200

seq1  CAGAGCATGTCTCATTCTTTACTGGAACTCCTGCTTGAAAAATGTGTTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATGTCTCATTCTTTACTGGAACTCCTGCTTGAAAAATGTGTTGC  250

seq1  CACTCAGGTACGGCTGACAGCTTTTCAGCATTTGTGAGAATAGCAAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGTACGGCTGACAGCTTTTCAGCATTTGTGAGAATAGCAAGTTA  300

seq1  CAGATGCTCCAGGGTCTTTGAAGTGAATGCCTTTTATTGTTGTTAATACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTCCAGGGTCTTTGAAGTGAATGCCTTTTATTGTTGTTAATACT  350

seq1  CAAGATGTGGTGCATCAAGGGTTGCTAGACTGAAGTTTTTTTCCACCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGTGGTGCATCAAGGGTTGCTAGACTGAAGTTTTTTTCCACCCCT  400

seq1  CACCTGCTAACACCTCTTGTTCAAACCCATACTCACAATGGTCTGTTCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCTAACACCTCTTGTTCAAACCCATACTCACAATGGTCTGTTCGT  450

seq1  TCCATTCTTTGTTGTCACCCAAGCAATCTGAATGTTGAAAGGTGCATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTTTGTTGTCACCCAAGCAATCTGAATGTTGAAAGGTGCATTAC  500

seq1  AAAGGATCTGACCTGATGTCCAAAATAGACTATAAAGTAGACAGGGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATCTGACCTGATGTCCAAAATAGACTATAAAGTAGACAGGGAAGA  550

seq1  ACATGAATTGTCTATCTCAAGGCCCTTCAAGGAACTCTCTTGAAAAGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAATTGTCTATCTCAAGGCCCTTCAAGGAACTCTCTTGAAAAGTGT  600

seq1  TAATTATGAAACATGGATACAGAATGCTAATTAATTTTCTGTCCTCCCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATGAAACATGGATACAGAATGCTAATTAATTTTCTGTCCTCCCAT  650

seq1  AAGAAGTTTCATAATCTTTCTCAATACAATATTCCAGGCAGCCATCTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTTCATAATCTTTCTCAATACAATATTCCAGGCAGCCATCTCCA  700

seq1  GAGAATCTGCAGCAGGAAAAACATTACAGTCTCTTCTTGCCCCTCTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCTGCAGCAGGAAAAACATTACAGTCTCTTCTTGCCCCTCTTTCT  750

seq1  GACTTCAGCAATATGGATGTTGAATCCTGGGACATAAATAAT-AACCATA  799
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GACTTCAGCAATATGGATGTTGAATCCTGGGACATAAATAATAAACCATA  800

seq1  CTAATGTGAATTCTTTTTCTTTAATTGAGAAGCATCATACTTACCTGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGTGAATTCTTTTTCTTTAATTGAGAAGCATCATACTTACCTGAGA  850

seq1  CTGAGGCTGGCTTGAACTCT-GGACCCTCCAGACTGAGATTACAGAATTT  898
      |||||||||||||||||||| |||||||||||||||||| ||||||||||
seq2  CTGAGGCTGGCTTGAACTCTGGGACCCTCCAGACTGAGA-TACAGAATTT  899

seq1  TGCCACAAGGCTTTTTCCTCTAGTTCTTAGAATGGGACCCTGAACCCTGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACAAGGCTTTTTCCTCTAGTTCTTAGAATGGGACCCTGAACCCTGT  949

seq1  GCAATGCTAGGCAGGCCCCAGCAACAAACTGGTATTTTTTTTTTAAAAGT  998
      ||||||||||||||||||||||||| ||||||   |||||||||||||||
seq2  GCAATGCTAGGCAGGCCCCAGCAAC-AACTGGGTATTTTTTTTTAAAAGT  998

seq1  TTGTTTCAGAAACTACATGAGAGCCATTTA-TTCAGACTC-TATTCCCTC  1046
      |||||||||||||||||||||||||||||| ||||||||| ||| || ||
seq2  TTGTTTCAGAAACTACATGAGAGCCATTTATTTCAGACTCTTATCCCTTC  1048

seq1  CACCTCCTCTGCTCTTCTGCTCCAGTTTCCAGGCTG-ATACCTGGACAGA  1095
      ||||||||||||||||||||||||||||||| |||| ||||  | || ||
seq2  CACCTCCTCTGCTCTTCTGCTCCAGTTTCCAAGCTGAATACTGGTACGGA  1098

seq1  CA-GTGAAGAGAAAC--TGACAGGAGC-TTCTGTTTTAAGATTTCAAGGA  1141
      || ||||||||||||   ||||||||| ||||| |||| || ||| ||  
seq2  CAGGTGAAGAGAAACCTGGACAGGAGCTTTCTG-TTTAGGAATTC-AGAT  1146

seq1  ATACTAGGGAACTCTGGTCCACTCT  1166
      || ||| ||||||||||||||||||
seq2  ATCCTAAGGAACTCTGGTCCACTCT  1171