BAC Information

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BAC

Clone NameB6Ng01-222F10
Chromosome3 (Build37)
Map Location 13,039,017 - 13,161,590
singlet/doubletdoublet
Overlap genenone
Upstream geneEG621965, LOC100039798, EG668033, LOC668037
Downstream geneLOC100039823, LOC100039861, 0710005M24Rik, LOC100041679, LOC100041667, LOC100039882
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222F10.bB6Ng01-222F10.g
ACCGA037386GA037387
length1,120990
definitionB6Ng01-222F10.b B6Ng01-222F10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,160,471 - 13,161,590)(13,039,017 - 13,039,866)
sequence
gaattctgacagttttgcttgaaacctatgaatcctaacttcctccaatg
ttagcttgctgtatgaattgagtcggatgtgtaatgattttgtaaactgt
gaagtattatagatgtggaagatctaagtaccacattctatcgtgttaaa
tagtagcaatctagagataggaagagaagaatggtctttgaacatggagt
gcacaggatgtgtttggaaatcagcatgttctatgtatagatgtgattgt
aactacagcattttgtatataggacaaagacaaattataggaaatttaaa
ttttcacttgggaataggctgagacaatcttcttttaatctcactcaata
tgcatgtttttattatttggaattacagagaggtaggaatgcactcagta
ataaagtgcttgcccaacatgcaccaggtcctgtgtctgatgtccagaaa
cacaagttaacaaggaagtcatgtgaagtggttctgaggtatgattgaca
tatgccatatcatatgcagcactgcatatgaagaactgacttagatatca
tatgcaacactgcgtatgaagaactgacttagatatatcctggatcctga
accaaaattaaaaaaagaaaaaagaaaaaaagtcatagatatgtactatg
attattttttgattttcataagaattgatacatctatttagaaattcagc
tagttggaaactttctattaattgaaataaattaaccttattttctttaa
cccatgaatttttgagctatacggactgtataattattttaatgaaaggg
ggatatctgaactactttttcctccaagggatgagagagaaggagaaaaa
caggaagtatttttctacttgtacctctatgttcacctgaaaagctactg
agtaggaagagaagtttgacgttagtaggaccatgggctactaaaaatat
aggttccgaggcccacctacagcaaattctagactactatatacctttct
gaaggggcccaagtcatgacaaacttgatccatgtaccaaaacgaaagtg
ttcacagactcatattcattacgtgctcaactgtgaggacaaggtagaaa
taatacagcatgggctatag

gaattcacctagcatgtagaccagggaataacatcggtgatcttaaccct
ccctcctcttctccaattccaatttcttttttctttctttctttcttcct
tccttccttccttccttccttccttcctttctttctttctttctttcttt
ctttctttctttctttctttctttctttttttattggtttttcaagacag
ggtttctctgtatatccctggctgtcctggaactcactctgtaaaacagg
ctggcctcgaactcagaaatccacctgcttttgcctcccaagtgctggga
atgaaggtgtgtgccatgactgcccagccaattccaatttctaaggaagc
tctatattgagagttttatctgacaccagtcagtatggccaagatcatta
taacaaatgacaacccatactaaggagtacatagaataagagaaacaatc
atccattgctgatgagactgcaaacttgtccacccattaagaaaacagtg
tgggagttcctcaggaagctgggaataaacctaccttgaaagccataact
aactcttgggcatataaccaatagatgtttaattgtactgcagagacctt
tgatcaactatgtttgttgatgctcttttcataagacatagaatttggaa
acagcctagatatccaatttggatgaatgcataaaaatgtggttcattta
cacaatgaaatattatgcagccattagaaaatggaatcatcaaatttgca
tttgaagggttagaggaagaaaaagtcatcctgagtaaagaaacttagac
tcaaaagggcaaatattatgcatatttgggtgttaggtgtaaaagcttct
gttaaaaaggctataatctatattgttgttcttcctagagagttgcagac
cccttcaactctttgtgtactttctctagctcctccatttggggccctgt
gttccatccacagacactatgagtatctacttctgtatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_13160471_13161590
seq2: B6Ng01-222F10.b_47_1166 (reverse)

seq1  CTATAGCCCATGCTGTATTATTTCTACTTTGTCCTCCACAG-TGAGCCAC  49
      ||||||||||||||||||||||||||| ||||||| ||||| |||| |||
seq2  CTATAGCCCATGCTGTATTATTTCTACCTTGTCCT-CACAGTTGAG-CAC  48

seq1  GGTATTGAATTATGAGTCTGTG-ACACTTTCGTTTTGGTACATGGATCAA  98
       ||| |||| |||||||||||| |||||||||||||||||||||||||||
seq2  -GTAATGAA-TATGAGTCTGTGAACACTTTCGTTTTGGTACATGGATCAA  96

seq1  GTTTGTCATGACTTGGGCCCCTTCAGAAAGGTATATAGTAGTCTAGAA-T  147
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTTGTCATGACTTGGGCCCCTTCAGAAAGGTATATAGTAGTCTAGAATT  146

seq1  TGCTGTAGGTGGGCCTCGGAACCTATATTTTTAGTAG-CCATGGTCCTAC  196
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCTGTAGGTGGGCCTCGGAACCTATATTTTTAGTAGCCCATGGTCCTAC  196

seq1  TAACGTCAAACTTCTCTTCCTACTCAGTAGCTTTTCAGGTGAACATAGAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACGTCAAACTTCTCTTCCTACTCAGTAGCTTTTCAGGTGAACATAGAG  246

seq1  GTACAAGTAGAAAAATACTTCCTGTTTTTCTCCTTCTCTCTCATCCCTTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAGTAGAAAAATACTTCCTGTTTTTCTCCTTCTCTCTCATCCCTTG  296

seq1  GAGGAAAAAGTAGTTCAGATATCCCCCTTTCATTAAAATAATTATACAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAAAGTAGTTCAGATATCCCCCTTTCATTAAAATAATTATACAGT  346

seq1  CCGTATAGCTCAAAAATTCATGGGTTAAAGAAAATAAGGTTAATTTATTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATAGCTCAAAAATTCATGGGTTAAAGAAAATAAGGTTAATTTATTT  396

seq1  CAATTAATAGAAAGTTTCCAACTAGCTGAATTTCTAAATAGATGTATCAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATAGAAAGTTTCCAACTAGCTGAATTTCTAAATAGATGTATCAA  446

seq1  TTCTTATGAAAATCAAAAAATAATCATAGTACATATCTATGACTTTTTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATGAAAATCAAAAAATAATCATAGTACATATCTATGACTTTTTTT  496

seq1  CTTTTTTCTTTTTTTAATTTTGGTTCAGGATCCAGGATATATCTAAGTCA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCTTTTTTTAATTTTGGTTCAGGATCCAGGATATATCTAAGTCA  546

seq1  GTTCTTCATACGCAGTGTTGCATATGATATCTAAGTCAGTTCTTCATATG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCATACGCAGTGTTGCATATGATATCTAAGTCAGTTCTTCATATG  596

seq1  CAGTGCTGCATATGATATGGCATATGTCAATCATACCTCAGAACCACTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCTGCATATGATATGGCATATGTCAATCATACCTCAGAACCACTTC  646

seq1  ACATGACTTCCTTGTTAACTTGTGTTTCTGGACATCAGACACAGGACCTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGACTTCCTTGTTAACTTGTGTTTCTGGACATCAGACACAGGACCTG  696

seq1  GTGCATGTTGGGCAAGCACTTTATTACTGAGTGCATTCCTACCTCTCTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTTGGGCAAGCACTTTATTACTGAGTGCATTCCTACCTCTCTGT  746

seq1  AATTCCAAATAATAAAAACATGCATATTGAGTGAGATTAAAAGAAGATTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCAAATAATAAAAACATGCATATTGAGTGAGATTAAAAGAAGATTG  796

seq1  TCTCAGCCTATTCCCAAGTGAAAATTTAAATTTCCTATAATTTGTCTTTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCCTATTCCCAAGTGAAAATTTAAATTTCCTATAATTTGTCTTTG  846

seq1  TCCTATATACAAAATGCTGTAGTTACAATCACATCTATACATAGAACATG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATATACAAAATGCTGTAGTTACAATCACATCTATACATAGAACATG  896

seq1  CTGATTTCCAAACACATCCTGTGCACTCCATGTTCAAAGACCATTCTTCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCAAACACATCCTGTGCACTCCATGTTCAAAGACCATTCTTCT  946

seq1  CTTCCTATCTCTAGATTGCTACTATTTAACACGATAGAATGTGGTACTTA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATCTCTAGATTGCTACTATTTAACACGATAGAATGTGGTACTTA  996

seq1  GATCTTCCACATCTATAATACTTCACAGTTTACAAAATCATTACACATCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCCACATCTATAATACTTCACAGTTTACAAAATCATTACACATCC  1046

seq1  GACTCAATTCATACAGCAAGCTAACATTGGAGGAAGTTAGGATTCATAGG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAATTCATACAGCAAGCTAACATTGGAGGAAGTTAGGATTCATAGG  1096

seq1  TTTCAAGCAAAACTGTCAGAATTC  1120
      ||||||||||||||||||||||||
seq2  TTTCAAGCAAAACTGTCAGAATTC  1120


seq1: chr3_13039017_13039866
seq2: B6Ng01-222F10.g_66_915

seq1  GAATTCACCTAGCATGTAGACCAGGGAATAACATCGGTGATCTTAACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTAGCATGTAGACCAGGGAATAACATCGGTGATCTTAACCCT  50

seq1  CCCTCCTCTTCTCCAATTCCAATTTCTTTTTTCTTTCTTTCTTTCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCTCTTCTCCAATTCCAATTTCTTTTTTCTTTCTTTCTTTCTTCCT  100

seq1  TCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCTTTCTTT  150

seq1  CTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTATTGGTTTTTCAAGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTTATTGGTTTTTCAAGACAG  200

seq1  GGTTTCTCTGTATATCCCTGGCTGTCCTGGAACTCACTCTGTAAAACAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTGTATATCCCTGGCTGTCCTGGAACTCACTCTGTAAAACAGG  250

seq1  CTGGCCTCGAACTCAGAAATCCACCTGCTTTTGCCTCCCAAGTGCTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTCGAACTCAGAAATCCACCTGCTTTTGCCTCCCAAGTGCTGGGA  300

seq1  ATGAAGGTGTGTGCCATGACTGCCCAGCCAATTCCAATTTCTAAGGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGTGTGTGCCATGACTGCCCAGCCAATTCCAATTTCTAAGGAAGC  350

seq1  TCTATATTGAGAGTTTTATCTGACACCAGTCAGTATGGCCAAGATCATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATTGAGAGTTTTATCTGACACCAGTCAGTATGGCCAAGATCATTA  400

seq1  TAACAAATGACAACCCATACTAAGGAGTACATAGAATAAGAGAAACAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAATGACAACCCATACTAAGGAGTACATAGAATAAGAGAAACAATC  450

seq1  ATCCATTGCTGATGAGACTGCAAACTTGTCCACCCATTAAGAAAACAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATTGCTGATGAGACTGCAAACTTGTCCACCCATTAAGAAAACAGTG  500

seq1  TGGGAGTTCCTCAGGAAGCTGGGAATAAACCTACCTTGAAAGCCATAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGTTCCTCAGGAAGCTGGGAATAAACCTACCTTGAAAGCCATAACT  550

seq1  AACTCTTGGGCATATAACCAATAGATGTTTAATTGTACTGCAGAGACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTGGGCATATAACCAATAGATGTTTAATTGTACTGCAGAGACCTT  600

seq1  TGATCAACTATGTTTGTTGATGCTCTTTTCATAAGACATAGAATTTGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAACTATGTTTGTTGATGCTCTTTTCATAAGACATAGAATTTGGAA  650

seq1  ACAGCCTAGATATCCAATTTGGATGAATGCATAAAAATGTGGTTCATTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCCTAGATATCCAATTTGGATGAATGCATAAAAATGTGGTTCATTTA  700

seq1  CACAATGAAATATTATGCAGCCATTAGAAAATGGAATCATCAAATTTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGAAATATTATGCAGCCATTAGAAAATGGAATCATCAAATTTGCA  750

seq1  TTTGAAGGGTTAGAGGAAGAAAAAGTCATCCTGAGTAAAGAAACTTAGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGGGTTAGAGGAAGAAAAAGTCATCCTGAGTAAAGAAACTTAGAC  800

seq1  TCAAAAGGGCAAATATTATGCATATTTGGGTGTTAGGTGTAAAAGCTTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGGCAAATATTATGCATATTTGGGTGTTAGGTGTAAAAGCTTCT  850


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