BAC Information

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BAC

Clone NameB6Ng01-222M17
Chromosome3 (Build37)
Map Location 150,477,766 - 150,478,677
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040633, LOC100040455, LOC100040463, LOC623554
Downstream geneEltd1, Ifi44, H28, Ptgfr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-222M17.bB6Ng01-222M17.g
ACCGA037714GA037715
length1,065989
definitionB6Ng01-222M17.b B6Ng01-222M17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgttccattatctacagacagggaagagaggaactttgagatg
actagacaatgtgctacttcagtacatacaaacacctgtgcctttcacca
ccccactaatgtagcattcaggctgggcatatcactcagttggtagaatg
ctttttcatacacatgcaaagcctgcagttcagcgctcagcactgcacac
aatgggcagtgtggtgcacaactctactcccagcacttggcaggctgagg
caatgggatcagaagttcaatgtttctacactgtgagttaaaagctcgac
tgggctatgctaaaccctgcctcacaaaaggcataaataaaaataaatat
ataaacgttattgcaaacacatacaaacaacttgattcgttctagagatg
cttatacatggtttgttggtctcctgtccatacacatggtttgcccatgc
tgaggttcagttacacggtggcaagtataatctgaacacaacaagggtaa
aaactgcaggattataaacatcaacattttaaactatttcacattctggg
aactgtgcaaagcatttcatgtcattcatattgcctaggatgtggatggg
tcacttctggtatattcacatcatgggcagtatcttcctgacagctactt
agtaacaattatgtatatcaaatccataatctttagacttttcatgcaca
agagtagttacactggcaattcagacatagcaaatagttcaactacatga
aaaaaaaaatatcttacatccagaaaaaaacaagctatcatgaaagacca
cactgatataacttttaaatattatattgaaggcagttctgttttataac
tgttgttactctattacagtgattaagccattaaaatgtgtatgtatctg
taatacaaaataaattttactaacttacactgtccatcttgatgtttcag
gcaataatcaatgacagccaaataataattaaataaaagtgattttataa
gattattgtggtgggcaaaaatatcacctgctgatattgtctccatggta
actcatagcataatg

gaattctgcgttaatcccttctgttcctgggctttttttgcttgggagac
tattaatgactgcttctatttctttaggggttatgggactgtttagatgg
tttatctgatcttgatttaattttgttacctggtatctggtttaaatttg
gcttctggaattgtccatttcatccagattttccagttttgttgagtcta
ggcttttgtattacgatctgatgattttttggatttcctcagtttctgtt
cttatatctcccttttccttcctgattttgttaatttggctactgtcttt
gtgttagtctggctaagggtttacctatgttgttgattttctcaaagaac
cagctcctgattttgttgattctttgaataattctttttgtttcaaattg
tttgatttcatccctgagtttgattatttcctaccttctactcctcttgg
gtgtatttgcttctttttgttctagagttttcagcagtactgtcaagctg
ctagtgtatactctctccagtttctttttggcggcactcagaggtatgag
ttttcctcttaatactcctttcattatgtcacataatttttggtatgtta
tacgttcattttcattgaattctaaaaagtcttcaatttcgttctttatt
tcttccctgaccaagttatcattgagtagagtgttcagcttccacatgaa
tgttggctttctattatttatgttgttattgaaaaccagccttagacctt
ggtgatctgataggatgtatgggattatttcaattttcttgtatctgttg
aggcctattttttgactgcttatatggtcagttctggagaaagtaaaata
aagtgctgagaagattgtatattcttttgttttaggatgaaatgttctat
agacatcagttaaatccattttgttcatgacttctgtagttttacagtgt
ctctgtgtaatttctgtttccatatgatgagaatgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_150477766_150478677
seq2: B6Ng01-222M17.b_44_955 (reverse)

seq1  TATTTTGTATTACAGATACATACACATTTTAATGGCTTAATCACTGTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTATTACAGATACATACACATTTTAATGGCTTAATCACTGTAAT  50

seq1  AGAGTAACAACAGTTATAAAACAGAACTGCCTTCAATATAATATTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAACAACAGTTATAAAACAGAACTGCCTTCAATATAATATTTAAAA  100

seq1  GTTATATCAGTGTGGTCTTTCATGATAGCTTGTTTTTTTCTGGATGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATCAGTGTGGTCTTTCATGATAGCTTGTTTTTTTCTGGATGTAAG  150

seq1  ATATTTTTTTTTTCATGTAGTTGAACTATTTGCTATGTCTGAATTGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTTTTTTCATGTAGTTGAACTATTTGCTATGTCTGAATTGCCAG  200

seq1  TGTAACTACTCTTGTGCATGAAAAGTCTAAAGATTATGGATTTGATATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTACTCTTGTGCATGAAAAGTCTAAAGATTATGGATTTGATATAC  250

seq1  ATAATTGTTACTAAGTAGCTGTCAGGAAGATACTGCCCATGATGTGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGTTACTAAGTAGCTGTCAGGAAGATACTGCCCATGATGTGAATA  300

seq1  TACCAGAAGTGACCCATCCACATCCTAGGCAATATGAATGACATGAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGAAGTGACCCATCCACATCCTAGGCAATATGAATGACATGAAATG  350

seq1  CTTTGCACAGTTCCCAGAATGTGAAATAGTTTAAAATGTTGATGTTTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCACAGTTCCCAGAATGTGAAATAGTTTAAAATGTTGATGTTTATA  400

seq1  ATCCTGCAGTTTTTACCCTTGTTGTGTTCAGATTATACTTGCCACCGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGCAGTTTTTACCCTTGTTGTGTTCAGATTATACTTGCCACCGTGT  450

seq1  AACTGAACCTCAGCATGGGCAAACCATGTGTATGGACAGGAGACCAACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAACCTCAGCATGGGCAAACCATGTGTATGGACAGGAGACCAACAA  500

seq1  ACCATGTATAAGCATCTCTAGAACGAATCAAGTTGTTTGTATGTGTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTATAAGCATCTCTAGAACGAATCAAGTTGTTTGTATGTGTTTGC  550

seq1  AATAACGTTTATATATTTATTTTTATTTATGCCTTTTGTGAGGCAGGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACGTTTATATATTTATTTTTATTTATGCCTTTTGTGAGGCAGGGTT  600

seq1  TAGCATAGCCCAGTCGAGCTTTTAACTCACAGTGTAGAAACATTGAACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATAGCCCAGTCGAGCTTTTAACTCACAGTGTAGAAACATTGAACTT  650

seq1  CTGATCCCATTGCCTCAGCCTGCCAAGTGCTGGGAGTAGAGTTGTGCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCCATTGCCTCAGCCTGCCAAGTGCTGGGAGTAGAGTTGTGCACC  700

seq1  ACACTGCCCATTGTGTGCAGTGCTGAGCGCTGAACTGCAGGCTTTGCATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTGCCCATTGTGTGCAGTGCTGAGCGCTGAACTGCAGGCTTTGCATG  750

seq1  TGTATGAAAAAGCATTCTACCAACTGAGTGATATGCCCAGCCTGAATGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAAAAAGCATTCTACCAACTGAGTGATATGCCCAGCCTGAATGCT  800

seq1  ACATTAGTGGGGTGGTGAAAGGCACAGGTGTTTGTATGTACTGAAGTAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGTGGGGTGGTGAAAGGCACAGGTGTTTGTATGTACTGAAGTAGC  850

seq1  ACATTGTCTAGTCATCTCAAAGTTCCTCTCTTCCCTGTCTGTAGATAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTCTAGTCATCTCAAAGTTCCTCTCTTCCCTGTCTGTAGATAATG  900

seq1  GAACATGAATTC  912
      ||||||||||||
seq2  GAACATGAATTC  912


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