BAC Information

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BAC

Clone NameB6Ng01-223K19
Chromosome3 (Build37)
Map Location 26,876,359 - 27,012,487
singlet/doubletdoublet
Overlap geneSpata16, LOC665258, Ect2
Upstream geneNlgn1, LOC229152
Downstream geneAadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b, E030011K20Rik, Pld1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223K19.bB6Ng01-223K19.g
ACCGA038347GA038348
length1,017979
definitionB6Ng01-223K19.b B6Ng01-223K19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(27,011,951 - 27,012,487)(26,876,359 - 26,876,896)
sequence
gaattctttgtgaattctcacccgaggaataccgaattctcaggtgatta
agttagcctctatcagcagacctgggagactagctctatccttagtttca
gtggtcagagtactctctgcatgcaagctctcctcttgcagggatggtga
tcagatatctggtgtttgaacctgcctcctggtagaagttgtgttccact
caccagaggccttaggatcccgtggctgatcctgtgtgggtccttgcggg
tgtccggagactcccctgggccagggaccacggtgctgcagtgggccggc
cggaagggacttgagccccatatcaggccgggttacctgcttccttaatt
actgcagtctcaggtcctgtgcgattggattggagcaggcgctgtgttcc
actcaccagaggtcttaggatcccgtggcagattctgtgtgggtccttgc
gggtgtccgcagactcccccagtccagggacctcggtgcagcagtgggcc
ggctggaagggacttgagccccgtatcaggcaatataatgtcttatgtag
ctgttttacaagttgttttctaacttttttttttttaattaaaaaaatta
ccattttgtgttcaccagtgttttgcctgcatgtatgtttgtggcctgac
tggacttggagttacagatggttgtgagccaccatgtgggtgctgggaat
cacactcaggttctttgaaagagccaccagtgccatctcttcagcccctt
caaatgaaaacccttctgaaatccagtaatgaaagtctttgctcagcggt
gtgccaaagttgttgcaagctctcttcattcctgttttttttcttcctgt
gactgtacttttgagatggcctgcctttgaactttgaactcagtatttta
tttttgttatttgacttaacctgacattgatgcttttttctgtatctttg
taacatggtgaatttttttctgcaacagtgatcttttttaattgctccaa
tcactatttagtgtctg

gaattccaattgattaggatatgttggtaatatttattttcatatgagat
attaagataaagtgattgttatttttgttgttagagatggaattttgttt
gtatgagtttgttgaaagattgctttcttgctttttctagggtgtagttt
cactccttgtgttggtgttttccatctgttatcctttgtagggctggatt
tgtggaaagatattgtgtaaattcagtcttgtcatggaataccttggttt
ttccatttactgtaattgagagttttgctggaaatggtagcctgggctgg
catttgtgttctcttagtgtctgtatgatatttgcccaggatcttcttgc
tttcacagtctctggtgagaagtctggtgtaattctgataggcctgcctt
tatatgttacttgacctttttcccttactgcttttaatattctttctttg
tttagtgcatttggtgttttgattattatgtgatgagaggaatttctttt
ctggtcaagtctatttggagttctgtaggcttcttgtatattcatgggca
tctctttctttaggtaagggaagttttcttctataattttgttgaagata
ctgattgtcccttcaagttggtaatcttcactctttctatacctattatg
cttaagtttggtcttctcattgtgtcctggatttcccagatattttgggt
tagtagcttttttgcgttttctttgactgtttgtgtcagtgttttctatg
gtatctttctgcaccagagattcactcttctatctcttgtattctgttga
tgatgctttgcatctatggacacttgatctctttcctagatttttataac
tccaagggttttcaggtgatttctttattgtctgtagttccatttttaga
tagtggatggttttgttcaattctctcaacttggttaattgtgtttcatg
taattacttaagggattttttgtgtttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_27011951_27012487
seq2: B6Ng01-223K19.b_46_582 (reverse)

seq1  TATATTGCCTGATACGGGGCTCAAGTCCCTTCCAGCCGGCCCACTGCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGCCTGATACGGGGCTCAAGTCCCTTCCAGCCGGCCCACTGCTGC  50

seq1  ACCGAGGTCCCTGGACTGGGGGAGTCTGCGGACACCCGCAAGGACCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGGTCCCTGGACTGGGGGAGTCTGCGGACACCCGCAAGGACCCACA  100

seq1  CAGAATCTGCCACGGGATCCTAAGACCTCTGGTGAGTGGAACACAGCGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATCTGCCACGGGATCCTAAGACCTCTGGTGAGTGGAACACAGCGCC  150

seq1  TGCTCCAATCCAATCGCACAGGACCTGAGACTGCAGTAATTAAGGAAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCAATCCAATCGCACAGGACCTGAGACTGCAGTAATTAAGGAAGCA  200

seq1  GGTAACCCGGCCTGATATGGGGCTCAAGTCCCTTCCGGCCGGCCCACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCCGGCCTGATATGGGGCTCAAGTCCCTTCCGGCCGGCCCACTGC  250

seq1  AGCACCGTGGTCCCTGGCCCAGGGGAGTCTCCGGACACCCGCAAGGACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCGTGGTCCCTGGCCCAGGGGAGTCTCCGGACACCCGCAAGGACCC  300

seq1  ACACAGGATCAGCCACGGGATCCTAAGGCCTCTGGTGAGTGGAACACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGATCAGCCACGGGATCCTAAGGCCTCTGGTGAGTGGAACACAAC  350

seq1  TTCTACCAGGAGGCAGGTTCAAACACCAGATATCTGATCACCATCCCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACCAGGAGGCAGGTTCAAACACCAGATATCTGATCACCATCCCTGC  400

seq1  AAGAGGAGAGCTTGCATGCAGAGAGTACTCTGACCACTGAAACTAAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAGAGCTTGCATGCAGAGAGTACTCTGACCACTGAAACTAAGGAT  450

seq1  AGAGCTAGTCTCCCAGGTCTGCTGATAGAGGCTAACTTAATCACCTGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAGTCTCCCAGGTCTGCTGATAGAGGCTAACTTAATCACCTGAGA  500

seq1  ATTCGGTATTCCTCGGGTGAGAATTCACAAAGAATTC  537
      |||||||||||||||||||||||||||||||||||||
seq2  ATTCGGTATTCCTCGGGTGAGAATTCACAAAGAATTC  537


seq1: chr3_26876359_26876896
seq2: B6Ng01-223K19.g_68_605

seq1  GAATTCCAATTGATTAGGATATGTTGGTAATATTTATTTTCATATGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATTGATTAGGATATGTTGGTAATATTTATTTTCATATGAGAT  50

seq1  ATTAAGATAAAGTGATTGTTATTTTTGTTGTTAGAGATGGAATTTTGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGATAAAGTGATTGTTATTTTTGTTGTTAGAGATGGAATTTTGTTT  100

seq1  GTATGAGTTTGTTGAAAGATTGCTTTCTTGCTTTTTCTAGGGTGTAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGTTTGTTGAAAGATTGCTTTCTTGCTTTTTCTAGGGTGTAGTTT  150

seq1  CACTCCTTGTGTTGGTGTTTTCCATCTGTTATCCTTTGTAGGGCTGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTTGTGTTGGTGTTTTCCATCTGTTATCCTTTGTAGGGCTGGATT  200

seq1  TGTGGAAAGATATTGTGTAAATTCAGTCTTGTCATGGAATACCTTGGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAGATATTGTGTAAATTCAGTCTTGTCATGGAATACCTTGGTTT  250

seq1  TTCCATTTACTGTAATTGAGAGTTTTGCTGGAAATGGTAGCCTGGGCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTTACTGTAATTGAGAGTTTTGCTGGAAATGGTAGCCTGGGCTGG  300

seq1  CATTTGTGTTCTCTTAGTGTCTGTATGATATTTGCCCAGGATCTTCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTGTTCTCTTAGTGTCTGTATGATATTTGCCCAGGATCTTCTTGC  350

seq1  TTTCACAGTCTCTGGTGAGAAGTCTGGTGTAATTCTGATAGGCCTGCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGTCTCTGGTGAGAAGTCTGGTGTAATTCTGATAGGCCTGCCTT  400

seq1  TATATGTTACTTGACCTTTTTCCCTTACTGCTTTTAATATTCTTTCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTTACTTGACCTTTTTCCCTTACTGCTTTTAATATTCTTTCTTTG  450

seq1  TTTAGTGCATTTGGTGTTTTGATTATTATGTGATGAGAGGAATTTCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTGCATTTGGTGTTTTGATTATTATGTGATGAGAGGAATTTCTTTT  500

seq1  CTGGTCAAGTCTATTTGGAGTTCTGTAGGCTTCTTGTA  538
      ||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAAGTCTATTTGGAGTTCTGTAGGCTTCTTGTA  538


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