BAC Information

Click to search

BAC

Clone NameB6Ng01-223L05
Chromosome3 (Build37)
Map Location 74,125,089 - 74,126,198
singlet/doubletsinglet
Overlap genenone
Upstream geneBche, LOC667425, LOC619764
Downstream geneLOC667434, LOC100041551, EG667459, BC050789, Serpini2, Wdr49
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223L05.bB6Ng01-223L05.g
ACCGA038365GA038366
length1,1421,115
definitionB6Ng01-223L05.b B6Ng01-223L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagctccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatggggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagttttttatca
tacagatctttcactttccttcgttagagtcacggccgagattattttat
attattttggtggctatttgagaaggggtgttggttttcctaatttcttc
tcagcctggttttaattctttggtggtagagaaaggccattgacttgttt
gagtttattttatatccagctacttccaccgaaagctgttatcaggttta
ggagttctctgttggatttaaggtcactctatataatactat
gaattcttcactgtgctcagtttatcctgtttcatttagtgaaacatttt
catgttattatttgtattgttttctttggtagcattcattttatttccta
cttattgctattttatttttcttatgtatgtactctatggtaattttgac
ctttgtgtttgagaagtcttaccatatccacaagaggtacatgtttcatc
tgaattatactttatgctgctgcaatttgtttacagtgcagttttttgtg
taggtgctaatatactaaagggtagaaatcatgcatttttttcatttttt
caaacttattttttaatgacattcaataaacttttgatgattaaaattgt
gtgtaatgagtgtgagtaaagttatggtataatttttctataataaatat
atattaatgtccacaattgtgttaacagtcagcacatagactatcatatg
ctggtactgcttatatgctcagattaaaatttttactcaaaatataatct
accaagaatcttcatgatctgttcactagaaattactaccatgcatctct
ggtgtgttggtctaaatgagaaaattatcccagcagtattaagactaaag
cctccaccctgagatttgtttcagttatgatctctttatgtttttagtaa
ctgaaatggtctttataagcctttcctcatgtagctcacctatgggaatt
gcaggtagtgaaatagtgctttaaaatctactttaatataagtgaggaac
tgttatcagaatcttgaaaccataatagtcaacctatggaaaatgaacca
aaatagtctcttttttatcaatttatttatttactcattttccaatggga
tatattcacatcccaatataaccctgtattttcctcccagcctacccctc
acatatttctcttcttcatgttcccctgcccttctctttttacatggggc
ttggggggaggaacttgtgtattctccctaccctggtacatcaagttgtt
atagactaagcccaccactctttcaaatgagttcagagatgcagctacag
gtaggaagtaacagaatcaaggcagccacaccattcagggtaaagccttc
tctacagtcattggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_74125089_74126198
seq2: B6Ng01-223L05.g_67_1181 (reverse)

seq1  CCCAATGACTGTAGGGGAGGCTTT-CCCTGATTGTGTTGCCTGCTTTTGG  49
      |||||||||||||| | ||||||| |||||| ||   || |||| ||  |
seq2  CCCAATGACTGTAGAGAAGGCTTTACCCTGAATGGTGTGGCTGCCTT--G  48

seq1  ATCCTGTT-CCTCCTA-CTGT-GCTGCCTTCTCTGGACTCA-TTGGAAGA  95
      || ||||| | ||||| |||| |||| | |||||| ||||| ||| ||||
seq2  ATTCTGTTACTTCCTACCTGTAGCTG-CATCTCTGAACTCATTTGAAAGA  97

seq1  GT-GTGGGCTTAGTCCTATAACAACTTGATGTACCAGGGTAGGGAG-ATA  143
      || ||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  GTGGTGGGCTTAGT-CTATAACAACTTGATGTACCAGGGTAGGGAGAATA  146

seq1  CACAAGTTCCT-CCCCCAAGCCCCATGTAAAAAGAGAAGGGCAGGGGAAC  192
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CACAAGTTCCTCCCCCCAAGCCCCATGTAAAAAGAGAAGGGCAGGGGAAC  196

seq1  ATGAAGAAGAGAAATATGTGAGGGGTAGGCTGGGAGGAAAATACA-GGTT  241
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATGAAGAAGAGAAATATGTGAGGGGTAGGCTGGGAGGAAAATACAGGGTT  246

seq1  ATATTGGGATGTGAATATATCCCATTGGAAAATGAGTAAATAAATAAATT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGGATGTGAATATATCCCATTGGAAAATGAGTAAATAAATAAATT  296

seq1  GATAAAAAAGAGACTATTTTGGTTCATTTTCCATAGGTTGACTATTATGG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAAAGAGACTATTTTGGTTCATTTTCCATAGGTTGACTATTATGG  346

seq1  TTTCAAGATTCTGATAACAGTTCCTCACTTATATTAAAGTAGATTTTAAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGATTCTGATAACAGTTCCTCACTTATATTAAAGTAGATTTTAAA  396

seq1  GCACTATTTCACTACCTGCAATTCCCATAGGTGAGCTACATGAGGAAAGG  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTATTTCACTACCTGCAATTCCCATAGGTGAGCTACATGAGGAAAGG  446

seq1  CTTATAAAGACCATTTCAGTTACTAAAAACATAAAGAGATCATAACTGAA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATAAAGACCATTTCAGTTACTAAAAACATAAAGAGATCATAACTGAA  496

seq1  ACAAATCTCAGGGTGGAGGCTTTAGTCTTAATACTGCTGGGATAATTTTC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCTCAGGGTGGAGGCTTTAGTCTTAATACTGCTGGGATAATTTTC  546

seq1  TCATTTAGACCAACACACCAGAGATGCATGGTAGTAATTTCTAGTGAACA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTAGACCAACACACCAGAGATGCATGGTAGTAATTTCTAGTGAACA  596

seq1  GATCATGAAGATTCTTGGTAGATTATATTTTGAGTAAAAATTTTAATCTG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGAAGATTCTTGGTAGATTATATTTTGAGTAAAAATTTTAATCTG  646

seq1  AGCATATAAGCAGTACCAGCATATGATAGTCTATGTGCTGACTGTTAACA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATAAGCAGTACCAGCATATGATAGTCTATGTGCTGACTGTTAACA  696

seq1  CAATTGTGGACATTAATATATATTTATTATAGAAAAATTATACCATAACT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTGTGGACATTAATATATATTTATTATAGAAAAATTATACCATAACT  746

seq1  TTACTCACACTCATTACACACAATTTTAATCATCAAAAGTTTATTGAATG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCACACTCATTACACACAATTTTAATCATCAAAAGTTTATTGAATG  796

seq1  TCATTAAAAAATAAGTTTGAAAAAATGAAAAAAATGCATGATTTCTACCC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAAAAAATAAGTTTGAAAAAATGAAAAAAATGCATGATTTCTACCC  846

seq1  TTTAGTATATTAGCACCTACACAAAAAACTGCACTGTAAACAAATTGCAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTATATTAGCACCTACACAAAAAACTGCACTGTAAACAAATTGCAG  896

seq1  CAGCATAAAGTATAATTCAGATGAAACATGTACCTCTTGTGGATATGGTA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATAAAGTATAATTCAGATGAAACATGTACCTCTTGTGGATATGGTA  946

seq1  AGACTTCTCAAACACAAAGGTCAAAATTACCATAGAGTACATACATAAGA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCTCAAACACAAAGGTCAAAATTACCATAGAGTACATACATAAGA  996

seq1  AAAATAAAATAGCAATAAGTAGGAAATAAAATGAATGCTACCAAAGAAAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAATAGCAATAAGTAGGAAATAAAATGAATGCTACCAAAGAAAA  1046

seq1  CAATACAAATAATAACATGAAAATGTTTCACTAAATGAAACAGGATAAAC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACAAATAATAACATGAAAATGTTTCACTAAATGAAACAGGATAAAC  1096

seq1  TGAGCACAGTGAAGAATTC  1110
      |||||||||||||||||||
seq2  TGAGCACAGTGAAGAATTC  1115