BAC Information

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BAC

Clone NameB6Ng01-225B09
Chromosome3 (Build37)
Map Location 17,150,894 - 17,152,094
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040034, LOC100040059, EG383936
Downstream geneLOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5, Cyp7b1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225B09.bB6Ng01-225B09.g
ACCGA039369GA039370
length1,207734
definitionB6Ng01-225B09.b B6Ng01-225B09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagctagtccacagttggaagctgaggcttgtattttaccatc
gccctagaggaggggtggctactcacaacaggctatttctctgtacctta
acgtctcctattctatctctttttatattgttcaagttattccacttctt
tttctctcccatctgaccaccacatgcttgatgtggcttccactggaggc
tgccatgaaacttgcagactcctgggtgacatcctccatttgtgctacat
agcatggtagcaatcaaatgtctaatgtctatggcttgcttgttgcatgc
attggagggcaagtctagggtggcatgtcaaaacacagttctctgtctgt
cttcctcttcccacattgcactgcctcaaattgatttgatctgatttgat
ttggtttttatgagtcctagggataagacaggttaggccctcaagccaca
aatcaagctaggatgaagaaaggatggccatctgctctgctcctgactga
tataagaacaacaccaccaacaagatatctctttgcccattgtcaggagg
aaggttcatttattaatgaaatcaaattttacaagttcaagatgaaaact
ctatgaaccattaaaaagaatattcaggaatggtttttgttttgaaaatt
tttttaaaatagttcattaaaagacaacttcctttaatgggaggcatatg
ttctaaagcggtaatgaagaaaaatgaataaaaaaataggaaccaaatat
tatgcatcagacttgattgttgatagcaaaaagattcatctgaaagaata
caaggagtaagacttactctgctactgaaattctacaatgttcctgctga
gtttgtttgtttaatacatatgttgccctatatgcatgtgtgtgtgtacc
acattctgccttgtaccagtggaggggcagaaaaagattcaatttaaact
cctggaattagagttttgaatgaaatgagcgaacaggtgagtgctaggaa
ccaaataagaggttcttctcaacaacatcaatgttcctaatcactttagc
atctatccaggctctttagctttaataataataaggtcaaaccaaaatac
ataccaagatttaattttggaaaactttttaagaattccaatagaactta
ttatcttaccatagattattgatattctaagttgttttaaaccaaaattt
caaatgt

gaattctgcactataactatttggccctgggttttttgggggagaggggg
tgatgattatttctatttccttaggtgttatgggactgtttagagagttt
aactgaccttgatttaactttgatatatgatatctgtctagaaaatcatc
cattttgtttgtattccccagttttgtagaatacagggtttgtagtagga
tctaatgtttgtttgtttgtttttgtttgtttgtttgggagttttttgcc
ttttttaaaaataaatttatttatttatttatttattattagatattttc
tttatatacgtttcacatgctatcccgaaagttccctataccctgccttc
accctgctcccctacccatccactcccacttcttggccctggcatttccc
tgtattggggcatataaagtttgcaataccaggaggcctctcttccgagt
gatggctgactaggccatcttctgctacatatacatctagagatatgagc
tctgagggtactggttagttcacattgttgttccacctatatcgttgcag
agcccttcatctacttgagtgctttctctagcttctccattggggacttt
gtgttccatcttatagatgactgtgacctatccacttctgtatttgccag
gcactggcatagcctcatacaagacagctaaatcagggtccctttaatca
atatcttttctggcttgtgcaataatgtctgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17150894_17152094
seq2: B6Ng01-225B09.b_49_1255

seq1  GAATTCAGAGCTAGTCCACAGTTGGAAGCTGAGGCTTGTATTTTACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCTAGTCCACAGTTGGAAGCTGAGGCTTGTATTTTACCATC  50

seq1  GCCCTAGAGGAGGGGTGGCTACTCACAACAGGCTATTTCTCTGTACCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTAGAGGAGGGGTGGCTACTCACAACAGGCTATTTCTCTGTACCTTA  100

seq1  ACGTCTCCTATTCTATCTCTTTTTATATTGTTCAAGTTATTCCACTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTCCTATTCTATCTCTTTTTATATTGTTCAAGTTATTCCACTTCTT  150

seq1  TTTCTCTCCCATCTGACCACCACATGCTTGATGTGGCTTCCACTGGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCCCATCTGACCACCACATGCTTGATGTGGCTTCCACTGGAGGC  200

seq1  TGCCATGAAACTTGCAGACTCCTGGGTGACATCCTCCATTTGTGCTACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGAAACTTGCAGACTCCTGGGTGACATCCTCCATTTGTGCTACAT  250

seq1  AGCATGGTAGCAATCAAATGTCTAATGTCTATGGCTTGCTTGTTGCATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGTAGCAATCAAATGTCTAATGTCTATGGCTTGCTTGTTGCATGC  300

seq1  ATTGGAGGGCAAGTCTAGGGTGGCATGTCAAAACACAGTTCTCTGTCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGGGCAAGTCTAGGGTGGCATGTCAAAACACAGTTCTCTGTCTGT  350

seq1  CTTCCTCTTCCCACATTGCACTGCCTCAAATTGATTTGATCTGATTTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCTTCCCACATTGCACTGCCTCAAATTGATTTGATCTGATTTGAT  400

seq1  TTGGTTTTTATGAGTCCTAGGGATAAGACAGGTTAGGCCCTCAAGCCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTTATGAGTCCTAGGGATAAGACAGGTTAGGCCCTCAAGCCACA  450

seq1  AATCAAGCTAGGATGAAGAAAGGATGGCCATCTGCTCTGCTCCTGACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAGCTAGGATGAAGAAAGGATGGCCATCTGCTCTGCTCCTGACTGA  500

seq1  TATAAGAACAACACCACCAACAAGATATCTCTTTGCCCATTGTCAGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAACAACACCACCAACAAGATATCTCTTTGCCCATTGTCAGGAGG  550

seq1  AAGGTTCATTTATTAATGAAATCAAATTTTACAAGTTCAAGATGAAAACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCATTTATTAATGAAATCAAATTTTACAAGTTCAAGATGAAAACT  600

seq1  CTATGAACCATTAAAAAGAATATTCAGGAATGGTTTTTGTTTTGAAAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAACCATTAAAAAGAATATTCAGGAATGGTTTTTGTTTTGAAAATT  650

seq1  TTTTTAAAATAGTTCATTAAAAGACAACTTCCTTTAATGGGAGGCATATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAATAGTTCATTAAAAGACAACTTCCTTTAATGGGAGGCATATG  700

seq1  TTCTAAAGCGGTAATGAAGAAAAATGAATAAAAAAATAGGAACCAAATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAGCGGTAATGAAGAAAAATGAATAAAAAAATAGGAACCAAATAT  750

seq1  TATGCATCAGACTTGATTGTTGATAGCAAAAAGATTCATCTGAAAGAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATCAGACTTGATTGTTGATAGCAAAAAGATTCATCTGAAAGAATA  800

seq1  CAAGGAGTAAGACTTACTCTGCTACTGAAATTCTACAATGTTCCTGCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGTAAGACTTACTCTGCTACTGAAATTCTACAATGTTCCTGCTGA  850

seq1  GTTTGTTTGTTTAATACATATGTTGCCCTATATGCATGTGTGTGTGTACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTAATACATATGTTGCCCTATATGCATGTGTGTGTGTACC  900

seq1  ACATTCTGCCTTGTACCAGTGGA-GGGCAGAAAAAGATTCAA-TTAAACT  948
      ||||||||||||||||||||||| |||||||||||||||||| |||||||
seq2  ACATTCTGCCTTGTACCAGTGGAGGGGCAGAAAAAGATTCAATTTAAACT  950

seq1  CCTGGAATTAGAGTTTTGAATGAAAATGAGCGAACAGGTGAGTGCTAGGA  998
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTGGAATTAGAGTTTTGAATG-AAATGAGCGAACAGGTGAGTGCTAGGA  999

seq1  ACCAAAT-AGAGGTTC-TCTCAACAAACATCAATGTTCCTAATCACTTAG  1046
      ||||||| |||||||| ||||||| |||||||||||||||||||||||  
seq2  ACCAAATAAGAGGTTCTTCTCAAC-AACATCAATGTTCCTAATCACTTTA  1048

seq1  CCATCTATCCAGCCTCTTTAGCTTTAATAATAATAAGTCAAAACAAAAAT  1096
       ||||||||||| ||||||||||||||||||||||||   |||| |||||
seq2  GCATCTATCCAGGCTCTTTAGCTTTAATAATAATAAGGTCAAACCAAAAT  1098

seq1  ACATA-CAAGATTAAAATTTTGAAAAC-TTTTAAGAAATCC-ATAGAACT  1143
      ||||| ||||||| || ||| |||||| ||||||||| ||| ||||||||
seq2  ACATACCAAGATTTAATTTTGGAAAACTTTTTAAGAATTCCAATAGAACT  1148

seq1  TAATAATCTACACATAAGATTATTGATA-TCTAAATTTGTATAAACCAAA  1192
      | || ||||   ||| |||||||||||| ||||| ||  | |||||||||
seq2  T-ATTATCTTACCAT-AGATTATTGATATTCTAAGTTGTTTTAAACCAAA  1196

seq1  A--TCAAATGT  1201
      |  ||||||||
seq2  ATTTCAAATGT  1207


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