BAC Information

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BAC

Clone NameB6Ng01-225C12
Chromosome3 (Build37)
Map Location 4,841,176 - 4,842,252
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039167, LOC667709
Downstream geneLOC620283, Zfhx4, Pxmp3, EG620382, EG667759
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225C12.bB6Ng01-225C12.g
ACCGA039421GA039422
length9881,097
definitionB6Ng01-225C12.b B6Ng01-225C12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaaactcaaatagctgagaagaacataaggaaatg
ttcaacatccttagtcatcagggaaatgcaaatcaaaaccaccctgagat
tccacctcacaccattcagagtgactaagatgaaaaactcaggtgacagc
acatgctggtcaggatgtggaaaaagagaacactcctccattgctggtgg
gattgcaagctggtcaaaccactctggaaattagcctggtggttcctcag
aaaattgtgaatagtactaccagaggaaccagctattccattcctgggct
tatacccagaaggtgctccaccatgtaatagggacacatgctcgactata
ttcatagcagccatatttatagtggccagaaggtggaagcaacccagatg
tccctctacagatgaatggatgcagaaaatgtggtacatttacacaatgg
agtcctgctcagccattataaaacagcaacttcatgaaattcacaggcaa
gtggatggaacttgagaatatcatactgagtgagatgattcaatcacaaa
ggaacaaatatggcctctactcactgataagtgggtattagctcaaaagt
taagaatacccaaaattcaattcacagaccataggaagtctaagaagaag
gaccacaataatgtggatgtttcagtgcttttgagaagggtgaacaaaat
actcacaggaggatatatggaaacaacgtgtggagcagagactgaaggaa
aggccatccagagactgtaccacctggggacatatcccatataccaaacc
tggatgttattgtggaaggcaggaagtgcctgctgatagaatcctgatat
ggctctctcctgagcacttctgtcagagcctgacaaatatagaggaggta
gcttgcagcaaaccactggattgggcttggggtgggagttgaggttcccg
atggaggagccagagaagagactgaaaggagctaatgg

gaattctttgcttacattttttctcattttactttgtatgtgtgtgcatg
tatgtttgtgtgtgcatgtttgcatggggtggggtagatgtaggtgtgat
atctgtgcatcttcccatgcatatgaatgtggtgaagaacaaagattgac
atcagtgtctcttctatactttccaccatatgtttttaagtcaggctttt
cactgaatctgaagcttagcatttgagatataccagctagttgggcctgc
ctggcttcccatccaagcccatcaggtgcttaaacttacacagcaatgat
tttattacccatctcctaccactagtatttcaatttcgtcaacttaccaa
agcaaattgaacattgagagaagaaacatcacatcatcaccaagccaacg
ctaccataagcagtggaggtaatgaatgcccagagagttggattgacata
aagcttggtgtgtcataaccatttaccacacaaataatattttgcttatc
cttctgatatttaattagtttactctcagaatgtaaaataaaaataataa
agtcatggtgctatttatgattgtgtttctgcttttataagggagaagac
ataatgcagcttacaaaagattcttggctgttttaagtatgtctttctgt
atagattttttgtttgtattagtttttaccaaattattatgattattata
ttttaaattcatttatttttagttacattactgcaaattttttgtataac
actttcattttaaatgtatcatttattatttgtaatcttagtatggtgaa
tcccttttttattatcaattcaacaaaactctaaaatcacttgcgagatg
tgtctgatagcttttataaagcattatttttaattattaattgaagtagg
aagatctatgcaattgtattatagaaacatttcctgacgaaagtattggg
ctataattagagccaattagacatttcattgtgttcactattaatgggag
ttgggaaataacatggatgttactttactgtattttggttattctgaaca
gtgaaaatgaatgactctcaagctgattccaggtaccagtcattttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_4841176_4842252
seq2: B6Ng01-225C12.g_65_1161

seq1  GAATTCTTTGCTTACATTTTTTCTCATTTTACTTTGTATGTGTGTGCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCTTACATTTTTTCTCATTTTACTTTGTATGTGTGTGCATG  50

seq1  TATGTTTGTGTGTGCATGTTTGCATGGGGTGGGGTAGATGTAGGTGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTGTGTGTGCATGTTTGCATGGGGTGGGGTAGATGTAGGTGTGAT  100

seq1  ATCTGTGCATCTTCCCATGCATATGAATGTGGTGAAGAACAAAGATTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGCATCTTCCCATGCATATGAATGTGGTGAAGAACAAAGATTGAC  150

seq1  ATCAGTGTCTCTTCTATACTTTCCACCATATGTTTTTAAGTCAGGCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTGTCTCTTCTATACTTTCCACCATATGTTTTTAAGTCAGGCTTTT  200

seq1  CACTGAATCTGAAGCTTAGCATTTGAGATATACCAGCTAGTTGGGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATCTGAAGCTTAGCATTTGAGATATACCAGCTAGTTGGGCCTGC  250

seq1  CTGGCTTCCCATCCAAGCCCATCAGGTGCTTAAACTTACACAGCAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCCCATCCAAGCCCATCAGGTGCTTAAACTTACACAGCAATGAT  300

seq1  TTTATTACCCATCTCCTACCACTAGTATTTCAATTTCGTCAACTTACCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTACCCATCTCCTACCACTAGTATTTCAATTTCGTCAACTTACCAA  350

seq1  AGCAAATTGAACATTGAGAGAAGAAACATCACATCATCACCAAGCCAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTGAACATTGAGAGAAGAAACATCACATCATCACCAAGCCAACG  400

seq1  CTACCATAAGCAGTGGAGGTAATGAATGCCCAGAGAGTTGGATTGACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCATAAGCAGTGGAGGTAATGAATGCCCAGAGAGTTGGATTGACATA  450

seq1  AAGCTTGGTGTGTCATAACCATTTACCACACAAATAATATTTTGCTTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTGGTGTGTCATAACCATTTACCACACAAATAATATTTTGCTTATC  500

seq1  CTTCTGATATTTAATTAGTTTACTCTCAGAATGTAAAATAAAAATAATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGATATTTAATTAGTTTACTCTCAGAATGTAAAATAAAAATAATAA  550

seq1  AGTCATGGTGCTATTTATGATTGTGTTTCTGCTTTTATAAGGGAGAAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGTGCTATTTATGATTGTGTTTCTGCTTTTATAAGGGAGAAGAC  600

seq1  ATAATGCAGCTTACAAAAGATTCTTGGCTGTTTTAAGTATGTCTTTCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGCAGCTTACAAAAGATTCTTGGCTGTTTTAAGTATGTCTTTCTGT  650

seq1  ATAGATTTTTTGTTTGTATTAGTTTTTACCAAATTATTATGATTATTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTTTTGTTTGTATTAGTTTTTACCAAATTATTATGATTATTATA  700

seq1  TTTTAAATTCATTTATTTTTAGTTACATTACTGCAAATTTTTTGTATAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAATTCATTTATTTTTAGTTACATTACTGCAAATTTTTTGTATAAC  750

seq1  ACTTTCATTTTAAATGTATCATTTATTA-TTGTAATCTTAGTATGGTGAA  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  ACTTTCATTTTAAATGTATCATTTATTATTTGTAATCTTAGTATGGTGAA  800

seq1  TCCC-TTTTTATTATCAATTCAAC-AAACTCTAAAATCACTTGCGAGATG  847
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCCCTTTTTTATTATCAATTCAACAAAACTCTAAAATCACTTGCGAGATG  850

seq1  TGTCTGATAGCTTTTATAAGGCATTA-TTTTAATTATTAATTGAAGTAGG  896
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  TGTCTGATAGCTTTTATAAAGCATTATTTTTAATTATTAATTGAAGTAGG  900

seq1  AAGATCTATGCAA-TGTA-TATAGAAACATTTCCTGACGAAAGTATTGGG  944
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  AAGATCTATGCAATTGTATTATAGAAACATTTCCTGACGAAAGTATTGGG  950

seq1  CTATAAATAGAGC--AATAGACA-TTCA-TGTGTTCACTATAAAT-GGAG  989
      |||||| ||||||  | |||||| |||| |||||||||||| ||| ||||
seq2  CTATAATTAGAGCCAATTAGACATTTCATTGTGTTCACTATTAATGGGAG  1000

seq1  TTGGGAAATAAACATGGATG-TAC-TTACTGTATTT--GTTA-TCTG-AC  1033
      ||||||||| |||||||||| ||| |||||||||||  |||| |||| ||
seq2  TTGGGAAAT-AACATGGATGTTACTTTACTGTATTTTGGTTATTCTGAAC  1049

seq1  AGTGAAAATG-ATGAC-CTC-AGCTGATT-CAAGTACCTGTCATTTTT  1077
      |||||||||| ||||| ||| |||||||| || ||||| |||||||||
seq2  AGTGAAAATGAATGACTCTCAAGCTGATTCCAGGTACCAGTCATTTTT  1097


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