BAC Information

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BAC

Clone NameB6Ng01-225D19
Chromosome3 (Build37)
Map Location 63,650,349 - 63,651,471
singlet/doubletsinglet
Overlap genePlch1
Upstream geneLOC676984, LOC666967, Mme
Downstream geneLOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225D19.bB6Ng01-225D19.g
ACCGA039483GA039484
length1,136524
definitionB6Ng01-225D19.b B6Ng01-225D19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgttaaacagatagatacatcatgaacttagaacggagtgttaa
ctgtctaatcagatggttactcctgtgaagccatctcatcctagacaaca
aatctacccagaagaagcactagggacagctttggtcagggacaaaggtc
agcaatatggatgaaagcccagtgtatccttatgagagataattgagcta
acaagctccagaggatagctactggtgtccaactccactcctccagccac
tgagctctaaactgccctcagagggctttctaaaactagattctgcctgg
acatggtgatacgtgcttgtaatcccagaagttgagaaatagagcagcaa
tatcaggagttcaaggctttccttgactacacagtggcattgatgctaga
ttgggtttatgagatcctgtctaaaaatgtaaaggactagactgattaac
ctctcaattcaaaacctttaaaatgaaagaaagaaaaagaagagaaaaag
aaaaagaaaagaaaaaggaaaaagaaaaggaaaggaaaggaaaaagaaaa
aggaaaaggaaaagaaagagaaagagaaagagagaaaaagaaaaagaaaa
agaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaagaaaaag
aaaaagaaaaagaaaaagatctaaattccttaccctagattaccaggtct
ttattctaatacctggccttgcctactccttaagcaccagaggtagtcta
ctggtcttcaaccccactctctctccatcattgtgctctgtgctgagtag
ttttaggtcaacttgacccaagctaaaattaactaggtggaaagaaccaa
agttaagaaaacttgtccaaataaaatccagctgtaggcaagcctgtatg
gcatgtttttaaattagtggctgaattgggaggacccacccctatgtgag
tagtgctatccctgggctggacttgggttctattatgaaagcaggctaag
caagctaatagagagcaatctagtaagcagtactctgccatgggcctctg
cgtcagctcctgcccttccagattccatgcccctgtttttgaagtttctg
ttctttgactgccttccagtgaatggactgacaatg
atgtcttgggggatggggggcaaataataataataataaaaataaaaagg
ggatgagctagtagggcagtggtggtgaattcctttaatcccagcacccg
ggaggcagaattcaaggccagctggtctacagaatgagttccataataga
caaggttacatggagaaaccctgtatcaaaaaaatcgaaaagaaaagaaa
agaaaagaaaagaaaagaaaagaaaagaaaagagaagagaagagaagagg
aggggaagagagaagagaagagaagagaggagaggagaggagaggagagg
agaggagaggagacacccttacatatactagcaagattttttcgaaagga
cccggatgtagctgtctcttgtgagactatgctggggcttagcaaaccca
caagtggatgcttacagtcagctattggatggatcacagggctcccgatg
gaggagctagagaaagtacccaaggagctaaagggatcttcaaccctata
ggtggaacaacattatgaactaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63650349_63651471
seq2: B6Ng01-225D19.b_49_1184

seq1  GAATTCTGTTAAACAGATAGATACATCATGAACTTAGAACGGAGTGTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTAAACAGATAGATACATCATGAACTTAGAACGGAGTGTTAA  50

seq1  CTGTCTAATCAGATGGTTACTCCTGTGAAGCCATCTCATCCTAGACAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTAATCAGATGGTTACTCCTGTGAAGCCATCTCATCCTAGACAACA  100

seq1  AATCTACCCAGAAGAAGCACTAGGGACAGCTTTGGTCAGGGACAAAGGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTACCCAGAAGAAGCACTAGGGACAGCTTTGGTCAGGGACAAAGGTC  150

seq1  AGCAATATGGATGAAAGCCCAGTGTATCCTTATGAGAGATAATTGAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATATGGATGAAAGCCCAGTGTATCCTTATGAGAGATAATTGAGCTA  200

seq1  ACAAGCTCCAGAGGATAGCTACTGGTGTCCAACTCCACTCCTCCAGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCTCCAGAGGATAGCTACTGGTGTCCAACTCCACTCCTCCAGCCAC  250

seq1  TGAGCTCTAAACTGCCCTCAGAGGGCTTTCTAAAACTAGATTCTGCCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTAAACTGCCCTCAGAGGGCTTTCTAAAACTAGATTCTGCCTGG  300

seq1  ACATGGTGATACGTGCTTGTAATCCCAGAAGTTGAGAAATAGAGCAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGATACGTGCTTGTAATCCCAGAAGTTGAGAAATAGAGCAGCAA  350

seq1  TATCAGGAGTTCAAGGCTTTCCTTGACTACACAGTGGCATTGATGCTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGAGTTCAAGGCTTTCCTTGACTACACAGTGGCATTGATGCTAGA  400

seq1  TTGGGTTTATGAGATCCTGTCTAAAAATGTAAAGGACTAGACTGATTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTTATGAGATCCTGTCTAAAAATGTAAAGGACTAGACTGATTAAC  450

seq1  CTCTCAATTCAAAACCTTTAAAATGAAAGAAAGAAAAAGAAGAGAAAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAATTCAAAACCTTTAAAATGAAAGAAAGAAAAAGAAGAGAAAAAG  500

seq1  AAAAAGAAAAGAAAAAGGAAAAAGAAAAGGAAAGGAAAGGAAAAAGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAGAAAAAGGAAAAAGAAAAGGAAAGGAAAGGAAAAAGAAAA  550

seq1  AGGAAAAGGAAAAGAAAGAGAAAGAGAAAGAGAGAAAAAGAAAAAGAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAGGAAAAGAAAGAGAAAGAGAAAGAGAGAAAAAGAAAAAGAAAA  600

seq1  AGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAG  650

seq1  AAAAAGAAAAAGAAAAAGATCTAAATTCCTTACCCTAGATTACCAGGTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAAAAGAAAAAGATCTAAATTCCTTACCCTAGATTACCAGGTCT  700

seq1  TTATTCTAATACCTGGCCTTGCCTACTCCTTAAGCACCAGAGGTAGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTAATACCTGGCCTTGCCTACTCCTTAAGCACCAGAGGTAGTCTA  750

seq1  CTGGTCTTCAACCCCACTCTCTCTCCATCATTGTGCTCTGTGCTGAGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTTCAACCCCACTCTCTCTCCATCATTGTGCTCTGTGCTGAGTAG  800

seq1  TTTTAGGTCAACTTGACCCAAGCTAAAATTAACTAGGTGGAAAGAACCAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGTCAACTTGACCCAAGCTAAAATTAACTAGGTGGAAAGAACCAA  850

seq1  AGTTAAGAAAACTTGTCCAAATAAAATCCAGCTGTAGGCAAGCCTGTATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGAAAACTTGTCCAAATAAAATCCAGCTGTAGGCAAGCCTGTATG  900

seq1  GCATGTTTTTAAATTAGTGGCTGAATTGGGAGGACCCACCCCTATGTGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTTTTTAAATTAGTGGCTGAATTGGGAGGACCCACCCCTATGTGAG  950

seq1  TAGTGCTATCCCTGGGCTGGACTTGGGTTCTA-TATGAAAGCAGGCTAAG  999
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAGTGCTATCCCTGGGCTGGACTTGGGTTCTATTATGAAAGCAGGCTAAG  1000

seq1  CAAGCT-ATAGAGAGCAATCTAGTAAGCAGTACTCTGCCAT-GGCCTCTG  1047
      |||||| |||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAGCTAATAGAGAGCAATCTAGTAAGCAGTACTCTGCCATGGGCCTCTG  1050

seq1  CGTCAGCTCCTG-CCTTCCAGATTCC-TG-CCCTGTTTT--GAGTTTCTG  1092
      |||||||||||| ||||||||||||| || |||||||||   ||||||||
seq2  CGTCAGCTCCTGCCCTTCCAGATTCCATGCCCCTGTTTTTGAAGTTTCTG  1100

seq1  T--CTTGACTTCCTT-CAGTG-ATGGACT-ACAATG  1123
      |   |||||| |||| ||||| ||||||| ||||||
seq2  TTCTTTGACTGCCTTCCAGTGAATGGACTGACAATG  1136