BAC Information

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BAC

Clone NameB6Ng01-225H19
Chromosome3 (Build37)
Map Location 60,156,534 - 60,157,678
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666756, EG229330, EG435732, LOC433597, LOC433598, LOC100040407, LOC669780, EG666803, C130079G13Rik, LOC676914, Aadacl2, Aadac, Sucnr1, LOC669823
Downstream geneLOC100040485, Mbnl1, LOC676933, LOC100040501, EG666853, P2ry1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-225H19.bB6Ng01-225H19.g
ACCGA039669GA039670
length1,2131,143
definitionB6Ng01-225H19.b B6Ng01-225H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaaagcaatctacagcaaacc
agtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaa
aatcagggactagacaaggctgccctctttctccctacctattcaacatt
gtacttgaagtcctacccagagcaattgggtaacaaaaggagatcaaggt
aatacaaattggaaaggaagaagtcaaaatatcactttttgcagatgata
taatagtgtctatataagtgaccctaaaaattccaccagagatctcctaa
acctgataaacagcttcggtgaagtggctggatataaaattaactcaaaa
aagtcaatggcttttctgtacacaaaggataaacagactgagaaagaaat
tagggaaacaacactcttttccttaatcacaaataatataaaataccttg
gcatgactctaactaaggaagtgaaacatctgtatgataagaacttcagg
tctctgaagaaagaaattagagaagatcttagaagatggaaagaactccc
attctcagggattagtaggatcaatacagtaaaactggctatcttgccaa
aagcaatctacagatttaatgcaatccccatcaaaattccaactcaattc
ttcaacgaattagaaggggcagtctccaaattcatctggaataacaaaaa
acctaagatagcaaaaactcttctcaagggtaaaagaacctctggtggaa
tcaccatgcctgacctaaagctgtactacagagcaattatgataaaaact
gcatggtactggtatagagagagacaagtacaccaatggaacaggattga
agacccagaaatgaacccacatacctattgtcacttgatcttttacaagg
gagcaaaaaccatccactgggaaaaagacagcactttcaacaaacggtgc
tggcacaactggctgttatcatgtagaagatttcgaattgatccagtact
atctccttgtactaaggtcaaatctaagtgggattacgaactccacacaa
atccagagacactgaaacttattagaggggaaagtaggaaaagcttgaag
attatggaaaatctgaatagaacagcatgcttatgctgtagatcagatga
catgggactctaatgcaagcttctgtgccagccaaaagaacacgctgttc
tcacattaaggac
gaattctttatctttggaggaaattgctatacaatatcctttgacatctg
gaattgattttcaagcaaggaaaactagaagaaatgtgtagttatatgct
acattgcctctctagaatcttgctttcttattatgtactctgcgttcatg
aaggccttttgtccctatgcaaattaaggtgtttatttgttaaagtgtag
gcttagatactattaaacaatccagaattaggagtctcaaaaagactgtg
tgttttttttttctcttatataacataccaaaataagagttattcatgac
aatgaggtacagttatgagatacttttcaggaccacacatatactttatt
ttgaggatccaaatcttcacagacttcaggttcatgcttttccacatttc
taccaagaaataaaagaggaaaaagagtggttttgatcatatgaaactgg
tggtaaagctgaatatagctgcaaaggaagctgagaaatatagtttctat
ctgagtagtgatttcgctgctaacactcatgaaagtggacattgagaaaa
attaaaaagtgaccaaaaataatgtctctgtatgtaatgtggatatatat
atatataatgtttagaagcagataatactgattgatctgttttgagtaga
ttatccacactagaatatgaatgaaaatggagagtataaatagttgactt
atataatgaatggtttgctatattttcaaatatttcattatcagtaatat
acatgtccacaacaatttgaattttagaaatttgagtaaattcaactact
tttatttcaaatgctgtgatttttttaatctagtatatactttaatgatg
ttaagaagagtttaataccaactaattgttttcctctccccataggttat
tgtaacatattcattcccacatttaacgtttataaggttctttgtatatg
aatagtgtgcataatttataatgttccaatatttgttattgtcaagtata
aatacatgctgacatttctactcctatgtttggctgttctgtcactgcta
gccaaaatggtggcacatgcaaaagaagaaaagatgctaacattcaggtt
ttcctgggcctgttgtaaaaactattgctactcaaactcagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_60156534_60157678
seq2: B6Ng01-225H19.g_61_1203 (reverse)

seq1  TACTGAGTTTGTGGTAGCATTAATTTTTTACAACA-GCCCAG--AAAACT  47
      |||||||||||  |||||| | | ||||||||||| ||||||  ||| ||
seq2  TACTGAGTTTG-AGTAGCAAT-AGTTTTTACAACAGGCCCAGGAAAACCT  48

seq1  GAATG-TAGCATCTTTTTCTCTTTTGCATTGTGCCCACATTTT-GCTAGC  95
      ||||| |||||||||||  ||||||||| ||||||  |||||| ||||||
seq2  GAATGTTAGCATCTTTTCTTCTTTTGCA-TGTGCCACCATTTTGGCTAGC  97

seq1  AGTGACAGAACAGCCAAACATAGGAGTAGAAATTGTCAGCATGTATTTAT  145
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGTGACAGAACAGCCAAACATAGGAGTAGAAA-TGTCAGCATGTATTTAT  146

seq1  ACTTGACAAATAACAAATATTGGAACATTATAAATTATGCACAACTATTC  195
      ||||||| |||||||||||||||||||||||||||||||||| |||||||
seq2  ACTTGAC-AATAACAAATATTGGAACATTATAAATTATGCAC-ACTATTC  194

seq1  ATATACAAAGAACCTTATAAACGTTAAATGTGGGAATGAATATGTTACAA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAAAGAACCTTATAAACGTTAAATGTGGGAATGAATATGTTACAA  244

seq1  TAACCTATGGGGAGAGGAAAAACAATTAGTTGGTATTAAACTCTTCTTAA  295
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TAACCTATGGGGAGAGG-AAAACAATTAGTTGGTATTAAACTCTTCTTAA  293

seq1  CATCATTAAAGTATATACTAGATTAAAAAAATCACAGCATTTGAAATAAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTAAAGTATATACTAGATTAAAAAAATCACAGCATTTGAAATAAA  343

seq1  AGTAGTTGAATTTACTCAAATTTCTAAAATTCAAATTGTTGTGGACATGT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTGAATTTACTCAAATTTCTAAAATTCAAATTGTTGTGGACATGT  393

seq1  ATATTACTGATAATGAAATATTTGAAAATATAGCAAACCATTCATTATAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTACTGATAATGAAATATTTGAAAATATAGCAAACCATTCATTATAT  443

seq1  AAGTCAACTATTTATACTCTCCATTTTCATTCATATTCTAGTGTGGATAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAACTATTTATACTCTCCATTTTCATTCATATTCTAGTGTGGATAA  493

seq1  TCTACTCAAAACAGATCAATCAGTATTATCTGCTTCTAAACATTATATAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACTCAAAACAGATCAATCAGTATTATCTGCTTCTAAACATTATATAT  543

seq1  ATATATATCCACATTACATACAGAGACATTATTTTTGGTCACTTTTTAAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATCCACATTACATACAGAGACATTATTTTTGGTCACTTTTTAAT  593

seq1  TTTTCTCAATGTCCACTTTCATGAGTGTTAGCAGCGAAATCACTACTCAG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCAATGTCCACTTTCATGAGTGTTAGCAGCGAAATCACTACTCAG  643

seq1  ATAGAAACTATATTTCTCAGCTTCCTTTGCAGCTATATTCAGCTTTACCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAACTATATTTCTCAGCTTCCTTTGCAGCTATATTCAGCTTTACCA  693

seq1  CCAGTTTCATATGATCAAAACCACTCTTTTTCCTCTTTTATTTCTTGGTA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTTCATATGATCAAAACCACTCTTTTTCCTCTTTTATTTCTTGGTA  743

seq1  GAAATGTGGAAAAGCATGAACCTGAAGTCTGTGAAGATTTGGATCCTCAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTGGAAAAGCATGAACCTGAAGTCTGTGAAGATTTGGATCCTCAA  793

seq1  AATAAAGTATATGTGTGGTCCTGAAAAGTATCTCATAACTGTACCTCATT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGTATATGTGTGGTCCTGAAAAGTATCTCATAACTGTACCTCATT  843

seq1  GTCATGAATAACTCTTATTTTGGTATGTTATATAAGAGAAAAAAAAAACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGAATAACTCTTATTTTGGTATGTTATATAAGAGAAAAAAAAAACA  893

seq1  CACAGTCTTTTTGAGACTCCTAATTCTGGATTGTTTAATAGTATCTAAGC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTCTTTTTGAGACTCCTAATTCTGGATTGTTTAATAGTATCTAAGC  943

seq1  CTACACTTTAACAAATAAACACCTTAATTTGCATAGGGACAAAAGGCCTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACTTTAACAAATAAACACCTTAATTTGCATAGGGACAAAAGGCCTT  993

seq1  CATGAACGCAGAGTACATAATAAGAAAGCAAGATTCTAGAGAGGCAATGT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACGCAGAGTACATAATAAGAAAGCAAGATTCTAGAGAGGCAATGT  1043

seq1  AGCATATAACTACACATTTCTTCTAGTTTTCCTTGCTTGAAAATCAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATATAACTACACATTTCTTCTAGTTTTCCTTGCTTGAAAATCAATTC  1093

seq1  CAGATGTCAAAGGATATTGTATAGCAATTTCCTCCAAAGATAAAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTCAAAGGATATTGTATAGCAATTTCCTCCAAAGATAAAGAATTC  1143