BAC Information

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BAC

Clone NameB6Ng01-226C09
Chromosome3 (Build37)
Map Location 46,557,084 - 46,558,223
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671801, EG241989
Downstream geneLOC545517, LOC383849, LOC383850, LOC100039426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226C09.bB6Ng01-226C09.g
ACCGA040162GA040163
length1,134494
definitionB6Ng01-226C09.b B6Ng01-226C09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttctttggctaaactactttattttaaaaatatgaaaaaattca
ttaaaatgttttcacaattactattcacttcataagaaaagcgtattctt
aaactataacaacatataataagttacattctacatattgatttcaattt
ttaagttaaaataaaattaagctttacataatatttttgacttaagattg
tctcttttaggaaaggcaaactaaaggataccttatcatgtcaaattaat
ttaaatttatggagatatcaacttgacaaattaaactttgatgtatttct
tcttttcatttttaccattagatttagcatttggagtcaattggaactaa
ttgaggtccagagaggataaaattatgcatttacttaaagatagacccat
atttagcacaaacaaggtcagaggatcaacaagctttgagacaaatgcta
aatttcaaatgtgtaatctaaactttattggtgcttttaagccaactagc
acattcatttctattcaaaggctttaatttagtcatcagagactgtaagg
cacattgcatttctgttcctcgtatggctcagtagcatttattgtcacaa
agcttgttaaaattttcaaaaagaaacctaaaatagaaacctgaagccac
taagaagttttgatgtaaaacttacctccttaaaataaatagcaaatagt
tgagaatagtattagtataaaaattagaacctatgcctttggtgcgatga
gagggagaagtttttcagtgttgatatactccatgccagtggaaagtatt
gtcagtatgaacatttaaactaaacagtgccttccacagcttcctgtcag
aataagccaaacaagattctgtttctcagaagggttcctggcagtcactt
tttatccataatgtcacaagctcatgtttcctatggagtagaaaaatgat
attgtcacttccagcccatttacttgggcttatttctgatggaatcacta
tatattttatgtgcacagttgccatgtgtttggttaaatttctagtgtaa
actttgggaaacaatttattctatcatttgtaagctgactactactgtac
ttggcttctggttctcagtttggttgttttgtac

tcaggggttcaggttaattgagactgatgcttctacaggatggcccttct
cctaggcttcttttcagccttccctaattcaacaggtgtcagctgctttt
gtccgttggttgagtgcaaatatctgcatctgattctttcagctgctttt
tgggtcttttggagggcggtcatgttaggtccctttttgtgtgtgctcca
tagccttaatatagtgtcaggccttgggacctccctttgagctggatcct
actttgggcctgtccctggaccttcttttcaggttcttctccatttccat
ccctgtaattctttctgaaaggtctgaaagaattacagggatacatatgc
agctagagtcaagagctccggggtaccggttcgttcataatgttgttcca
cctatagggttgcagaggcccattgacatgcaaactttatatgccccagt
acaggggaaagccagggccaaaaagggggaatgggtgggtaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_46557084_46558223
seq2: B6Ng01-226C09.b_44_1177 (reverse)

seq1  GTACAAAACAAACAAACTGAAGAAACCAGAGCCAAAGTACAAGTAGTAGT  50
      ||||||||||| ||||||||   |||||||  | |||||| |||||||||
seq2  GTACAAAACAACCAAACTGA--GAACCAGAAGCCAAGTAC-AGTAGTAGT  47

seq1  CAGCTTAACAAATGATTAGAATAAATTTGTTTCCAAAGTTTACAACTAGA  100
      |||||| |||||||| |||||||||||  || ||||||||||| ||||||
seq2  CAGCTT-ACAAATGA-TAGAATAAATTGTTTCCCAAAGTTTAC-ACTAGA  94

seq1  AATTTAACCAAACACATGGCAACTGTGCACATAAAATATATAGTGATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACCAAACACATGGCAACTGTGCACATAAAATATATAGTGATTCC  144

seq1  ATCAGAAATAAGCCCAAGTAAATGGGCTGGAAGTGACAATATCATTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAAATAAGCCCAAGTAAATGGGCTGGAAGTGACAATATCATTTTTC  194

seq1  TACTCCATAGGAAACATGAGCTTGTGACATTATGGATAAAAAGTGACTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCATAGGAAACATGAGCTTGTGACATTATGGATAAAAAGTGACTGC  244

seq1  CAGGAACCCTTCTGAGAAACAGAATCTTGTTTGGCTTATTCTGACAGGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACCCTTCTGAGAAACAGAATCTTGTTTGGCTTATTCTGACAGGAA  294

seq1  GCTGTGGAAGGCACTGTTTAGTTTAAATGTTCATACTGACAATACTTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGAAGGCACTGTTTAGTTTAAATGTTCATACTGACAATACTTTCC  344

seq1  ACTGGCATGGAGTATATCAACACTGAAAAACTTCTCCCTCTCATCGCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCATGGAGTATATCAACACTGAAAAACTTCTCCCTCTCATCGCACC  394

seq1  AAAGGCATAGGTTCTAATTTTTATACTAATACTATTCTCAACTATTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATAGGTTCTAATTTTTATACTAATACTATTCTCAACTATTTGCT  444

seq1  ATTTATTTTAAGGAGGTAAGTTTTACATCAAAACTTCTTAGTGGCTTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTTAAGGAGGTAAGTTTTACATCAAAACTTCTTAGTGGCTTCAG  494

seq1  GTTTCTATTTTAGGTTTCTTTTTGAAAATTTTAACAAGCTTTGTGACAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTATTTTAGGTTTCTTTTTGAAAATTTTAACAAGCTTTGTGACAAT  544

seq1  AAATGCTACTGAGCCATACGAGGAACAGAAATGCAATGTGCCTTACAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTACTGAGCCATACGAGGAACAGAAATGCAATGTGCCTTACAGTC  594

seq1  TCTGATGACTAAATTAAAGCCTTTGAATAGAAATGAATGTGCTAGTTGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGACTAAATTAAAGCCTTTGAATAGAAATGAATGTGCTAGTTGGC  644

seq1  TTAAAAGCACCAATAAAGTTTAGATTACACATTTGAAATTTAGCATTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGCACCAATAAAGTTTAGATTACACATTTGAAATTTAGCATTTGT  694

seq1  CTCAAAGCTTGTTGATCCTCTGACCTTGTTTGTGCTAAATATGGGTCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGCTTGTTGATCCTCTGACCTTGTTTGTGCTAAATATGGGTCTAT  744

seq1  CTTTAAGTAAATGCATAATTTTATCCTCTCTGGACCTCAATTAGTTCCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGTAAATGCATAATTTTATCCTCTCTGGACCTCAATTAGTTCCAA  794

seq1  TTGACTCCAAATGCTAAATCTAATGGTAAAAATGAAAAGAAGAAATACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTCCAAATGCTAAATCTAATGGTAAAAATGAAAAGAAGAAATACAT  844

seq1  CAAAGTTTAATTTGTCAAGTTGATATCTCCATAAATTTAAATTAATTTGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTTAATTTGTCAAGTTGATATCTCCATAAATTTAAATTAATTTGA  894

seq1  CATGATAAGGTATCCTTTAGTTTGCCTTTCCTAAAAGAGACAATCTTAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAAGGTATCCTTTAGTTTGCCTTTCCTAAAAGAGACAATCTTAAG  944

seq1  TCAAAAATATTATGTAAAGCTTAATTTTATTTTAACTTAAAAATTGAAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAATATTATGTAAAGCTTAATTTTATTTTAACTTAAAAATTGAAAT  994

seq1  CAATATGTAGAATGTAACTTATTATATGTTGTTATAGTTTAAGAATACGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGTAGAATGTAACTTATTATATGTTGTTATAGTTTAAGAATACGC  1044

seq1  TTTTCTTATGAAGTGAATAGTAATTGTGAAAACATTTTAATGAATTTTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTATGAAGTGAATAGTAATTGTGAAAACATTTTAATGAATTTTTT  1094

seq1  CATATTTTTAAAATAAAGTAGTTTAGCCAAAGAAGAATTC  1140
      ||||||||||||||||||||||||||||||||||||||||
seq2  CATATTTTTAAAATAAAGTAGTTTAGCCAAAGAAGAATTC  1134


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