BAC Information

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BAC

Clone NameB6Ng01-226G24
Chromosome4 (Build37)3 (Build37)
Map Location 68,216,510 - 68,217,654106,219,259 - 106,219,735
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC433715, Tcp1-ps1
Downstream geneDbc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226G24.bB6Ng01-226G24.g
ACCGA040378GA040379
length1,137895
definitionB6Ng01-226G24.b B6Ng01-226G24.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,216,510 - 68,217,654)(106,219,259 - 106,219,735)
sequence
gaattcatcatctgggcagtccttggcaagtatcagatgctatgtaaagt
agctggcatactctaacttacttaaataatgtatcctgccaaagtcaaac
attatctccaggtcaccaaggaggttaaaggatgagccataatccagtat
ctaagcccatgctcttttttcctctttagctagagctctttccttaccaa
ctcactgccatgtcattctttttctagggcgtttaggaagctacaaattc
tccctgtgatctgagatcagtttaaaattcagttgtaaagtatgtaagaa
ctgggcaagctcaaggccagggtgggtttccaagtagtagctgatatatt
attggcttttctgccttgttctttttcaaatataagacagtgcatgagcc
agcaggagtcatagtctagactacgggtaaactgtaataataatactttg
catcaacagggcactactcatctaagacatccaagaagtaggtccacatt
aattaaacttcaaacatcagagtctttagggtcaggactgtaccaatttt
ggaggcagataaactgaaatgctaatgactcttacaaagaacaaaatcaa
gacagatcatttgtcgtgatcacctctgaggcagatgatagaagcacggg
ctgtgagttaacccaaataatcattacataaaattgtatggcatagaaag
tgatggctgtgaagtcagcagaaacaagtttctcggctgaacttttcatt
tgttatcagtgtgaatagagccaagtcacctttcctttctcattctccat
gtactgaagagcaaaacaacaacaacaacaacaacaaaaatctgctgagt
gctgccttaccaggatcatctgttccttcaggtggaaatatctgaacata
ggttttcagataattcttcattgtctttgtaccagagtgacccagaatca
aggggtgagagagagtttagttgttggtagcatcatttaaattatataga
ttcacagtcctaacctagtactctatttacatatgacatgaaacaacaaa
tacagactttgaatagtcctcagtgattctgataactgtttctcttctga
tttttgtattgttgcatgaatggaaattagacctttc

gaattctttgttcagctctgagccccattttttaatggggttatttgagt
ccaccttcttgagttgtttatatatatattggatattagtcccctatccg
atttgggataggtaaagatcctttcccaatctgttggtggcctttttgtc
ttattgatggtgtcttttgctttgcagaagctttgcaattttatgaggtc
ccatttgtcgattcttgatcttacagcacaagccattgctgttctattca
gtaatttttaccctgtacccatatctgtccctgtttagtttctgtttcca
tgatctgtccattggtgaaagtggaatgttgaagtctcccactattattg
tttgagttacaatgtgtgctttgagctttactaaagtttctttaatgaat
gtggctgcccttgcatttggagcatagatattcagaattgagagttcctc
ttggaggattttacctttgatgagtatgaagtgcccctccttgtcttttt
tgattattttgggttggaagtccattttgttagatattagaatggctact
ccagattgtttcttcagaccatttgcttgtaatattgttttccagccttt
cattccgaggtagtgtctatctttttctctgagatgagtttcctgtaagc
agcaaaatgttggatcttgtttgtgtagccagtttgttagtctatgcctt
tttattgggagttgagtccattgatattaagagatattatggaaaagtaa
ttgttgcttcctgttatttttgttttaaagttggcattctgttcttgtgg
ctttctttctcttaggtttgttgagggattaccttcttttattttctagg
atgtgggtcccgtccttgtatgggtttttttttctgtaatatcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_68216510_68217654
seq2: B6Ng01-226G24.b_47_1183

seq1  GAATTCATCATCTGGGCAGTCCTTGGCAAGTATCAGATGCTATGTAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCATCTGGGCAGTCCTTGGCAAGTATCAGATGCTATGTAAAGT  50

seq1  AGCTGGCATACTCTAACTTACTTAAATAATGTATCCTGCCAAAGTCAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCATACTCTAACTTACTTAAATAATGTATCCTGCCAAAGTCAAAC  100

seq1  ATTATCTCCAGGTCACCAAGGAGGTTAAAGGATGAGCCATAATCCAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCCAGGTCACCAAGGAGGTTAAAGGATGAGCCATAATCCAGTAT  150

seq1  CTAAGCCCATGCTCTTTTTTCCTCTTTAGCTAGAGCTCTTTCCTTACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCCATGCTCTTTTTTCCTCTTTAGCTAGAGCTCTTTCCTTACCAA  200

seq1  CTCACTGCCATGTCATTCTTTTTCTAGGGCGTTTAGGAAGCTACAAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGCCATGTCATTCTTTTTCTAGGGCGTTTAGGAAGCTACAAATTC  250

seq1  TCCCTGTGATCTGAGATCAGTTTAAAATTCAGTTGTAAAGTATGTAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGATCTGAGATCAGTTTAAAATTCAGTTGTAAAGTATGTAAGAA  300

seq1  CTGGGCAAGCTCAAGGCCAGGGTGGGTTTCCAAGTAGTAGCTGATATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAAGCTCAAGGCCAGGGTGGGTTTCCAAGTAGTAGCTGATATATT  350

seq1  ATTGGCTTTTCTGCCTTGTTCTTTTTCAAATATAAGACAGTGCATGAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTTTCTGCCTTGTTCTTTTTCAAATATAAGACAGTGCATGAGCC  400

seq1  AGCAGGAGTCATAGTCTAGACTACGGGTAAACTGTAATAATAATACTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGTCATAGTCTAGACTACGGGTAAACTGTAATAATAATACTTTG  450

seq1  CATCAACAGGGCACTACTCATCTAAGACATCCAAGAAGTAGGTCCACATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAACAGGGCACTACTCATCTAAGACATCCAAGAAGTAGGTCCACATT  500

seq1  AATTAAACTTCAAACATCAGAGTCTTTAGGGTCAGGACTGTACCAATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAACTTCAAACATCAGAGTCTTTAGGGTCAGGACTGTACCAATTTT  550

seq1  GGAGGCAGATAAACTGAAATGCTAATGACTCTTACAAAGAACAAAATCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCAGATAAACTGAAATGCTAATGACTCTTACAAAGAACAAAATCAA  600

seq1  GACAGATCATTTGTCGTGATCACCTCTGAGGCAGATGATAGAAGCACGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATCATTTGTCGTGATCACCTCTGAGGCAGATGATAGAAGCACGGG  650

seq1  CTGTGAGTTAACCCAAATAATCATTACATAAAATTGTATGGCATAGAAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGAGTTAACCCAAATAATCATTACATAAAATTGTATGGCATAGAAAG  700

seq1  TGATGGCTGTGAAGTCAGCAGAAACAAGTTTCTCGGCTGAACTTTTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGCTGTGAAGTCAGCAGAAACAAGTTTCTCGGCTGAACTTTTCATT  750

seq1  TGTTATCAGTGTGAATAGAGCCAAGTCACCTTTCCTTTCTCATTCTCCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCAGTGTGAATAGAGCCAAGTCACCTTTCCTTTCTCATTCTCCAT  800

seq1  GTACTGAAGAGCAAAACAACAACAACAACAACAACAAAAATCTGCTGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAAGAGCAAAACAACAACAACAACAACAACAAAAATCTGCTGAGT  850

seq1  GCTGCCTTACCAGGATCATCTGTTCCTTCAGGTGGAAATATCTGAACATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTTACCAGGATCATCTGTTCCTTCAGGTGGAAATATCTGAACATA  900

seq1  GGTTTTCAGATAATTCTTCATTGTCTTTGTACCAGAGTGACCCAGAATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGTTTTCAGATAATTCTTCATTGTCTTTGTACCAGAGTGACCCAGAATC-  949

seq1  AAGGGGTGAGAAGAGAGTTTAGTTGTTGGTAGCATCATTTAAATTAATAT  1000
      |||||||||| |||||||||||||||||||||||||||||||||| ||||
seq2  AAGGGGTGAG-AGAGAGTTTAGTTGTTGGTAGCATCATTTAAATT-ATAT  997

seq1  AGATTCACAGTCCTAACCTAGTTACTCTAATTTACATATGACATGAAAC-  1049
      ||||||||||||||||||||| |||||| |||||||||||||||||||| 
seq2  AGATTCACAGTCCTAACCTAG-TACTCT-ATTTACATATGACATGAAACA  1045

seq1  ACAAATACAAGACTTTTGAATAGTCCTCAGTGATTCTGATAAAACTGTTT  1099
      |||||||| |||| ||||||||||||||||||||||||||  ||||||||
seq2  ACAAATAC-AGAC-TTTGAATAGTCCTCAGTGATTCTGAT--AACTGTTT  1091

seq1  CTCTTCTGATTTTTGTATTGTTTCCATGAATGAAAATAAGA-CTTTC  1145
      |||||||||||||||||||| || |||||||| |||| ||| |||||
seq2  CTCTTCTGATTTTTGTATTG-TTGCATGAATGGAAATTAGACCTTTC  1137


seq1: chr3_106219259_106219735
seq2: B6Ng01-226G24.g_437_914 (reverse)

seq1  CCTAGAAAAAACAAGAAGGTAATTCCTCAACAAACCTAAAAG-AAGACAG  49
      ||||||||| | ||||||||||| ||||||||||||||| || |||| ||
seq2  CCTAGAAAATAAAAGAAGGTAATCCCTCAACAAACCTAAGAGAAAGAAAG  50

seq1  CCACAAGAACAGAATGCCAACTTTAACAACAAAAATAACAGGAAGCATCA  99
      |||||||||||||||||||||||||| |||||||||||||||||||| ||
seq2  CCACAAGAACAGAATGCCAACTTTAA-AACAAAAATAACAGGAAGCAACA  99

seq1  ATTACTTTTCCTTAATATCTCTTAACATCAATGGTCTCAACTCCCCAATA  149
      ||||||||||| ||||||||||||| |||||||| ||||||| |||||||
seq2  ATTACTTTTCCATAATATCTCTTAATATCAATGGACTCAACT-CCCAATA  148

seq1  AAAAGACAT--ACTAACAAACTGGCTACACAAACAAGACCCAACATTTTG  197
      ||||| |||  ||||||||||||||||||||||||||| |||||||||||
seq2  AAAAGGCATAGACTAACAAACTGGCTACACAAACAAGATCCAACATTTTG  198

seq1  CTGTTTACAGGAGACACATCTCAGAGAAAAAGATAGACACTACCTCAGAA  247
      ||| |||||||| || |||||||||||||||||||||||||||||| |||
seq2  CTGCTTACAGGAAACTCATCTCAGAGAAAAAGATAGACACTACCTCGGAA  248

seq1  TAAAAGGCTGGAAAATAATTTTCCAAGCAAATGGTATGAAGAAACAAGCT  297
      | ||||||||||||| ||| || |||||||||||| ||||||||||| ||
seq2  TGAAAGGCTGGAAAACAATATTACAAGCAAATGGTCTGAAGAAACAATCT  298

seq1  GGAGTAGCCATCCTAATATCTGATAAGATTGACTTCCAACCCAAAGTTAT  347
      ||||||||||| ||||||||| | || || ||||||||||||||| | ||
seq2  GGAGTAGCCATTCTAATATCTAACAAAATGGACTTCCAACCCAAAATAAT  348

seq1  CAAAAAAGACAAGGAGGGGCACTTCGTTCTCATCAAAGGTAATGTCCTCC  397
      ||||||||||||||||||||||||| | ||||||||||||||  ||||||
seq2  CAAAAAAGACAAGGAGGGGCACTTCATACTCATCAAAGGTAAAATCCTCC  398

seq1  AAGAGGAACTCTCAATTCTGAATATCTATGCTCCAAATACAAGGGCAGCC  447
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGAGGAACTCTCAATTCTGAATATCTATGCTCCAAATGCAAGGGCAGCC  448

seq1  ACATTCATTAAAGAAACTTTAGTAAAGCTC  477
      ||||||||||||||||||||||||||||||
seq2  ACATTCATTAAAGAAACTTTAGTAAAGCTC  478


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