BAC Information

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BAC

Clone NameB6Ng01-227G16
Chromosome3 (Build37)
Map Location 26,316,798 - 26,317,500
singlet/doubletsinglet
Overlap genenone
Upstream geneNlgn1, LOC621017, LOC229152
Downstream geneSpata16, LOC665258, Ect2, Aadacl1, LOC100040527, Tnfsf10, Ghsr, Fndc3b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-227G16.bB6Ng01-227G16.g
ACCGA041091GA041092
length7031,222
definitionB6Ng01-227G16.b B6Ng01-227G16.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgtgtgcagtgtgctcctgctttgtcatagagtttttctca
atgtgagactctacctcaggctggatcctctccttcgcatctaaccctca
catgtctccactcttacaatccttgagtggactattgtcagttgttctac
aatggcttgagagtgttggattttctccattgttcttgttctgccttagt
tttggatagatgttgtgtccctggaagttcagtgccccccccccccaaag
gctgtttttccatcaatggcagacttttctaaagggacagattcagcaga
tgaatctttttgtggccttcattatattgcaaggagtttctgttaccagg
tggtaccaaggtatctgctcttcttccctgtcataagaaagaaatgtctc
tgtgaattttagtttgaaggaattaacaatgtacagagaattagaaactt
tggagcataaattctgaattggatgttttcactgattctttcctcaaggt
agggaactaagcagaggaagaaaggttgtgagagccagaggggagagttg
attccaagaaaataggatttctagatacaacaggattgatgcacatacga
acttgaaatcacagagactatgacagcaggcacagtgccttcataggttt
aagtctgtgctaaggtttcaatagtgaatatgtgtgtgtgggtgggtgtg
agt
gaattctcacctgataaatactgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccgtgggat
tccacctcacaccatttagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggttgtggagaaagaggaacactcctccattgttggtg
ggattgtaagcttgtacaaccactctggaagtcagtctgctggttcctca
aaaaattggtcatagtactaccggagaaccccgaaatacctctcctgggc
atatatccagaagatgccccaaccagtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgatacatttacacaatg
gattactactcagttattaaaaagaatgaatgtatgaaattcctaggcaa
atggatggacctggagggcatcatcttcagtgaagtaacccaatcacaaa
agaacttgtaaatatgtacttactgataagtggatattagcccagaaaat
tagaatacccaagatataagatacaatttgctaaacgcatgaaactcaag
aagaatgaagaccaaagtgtggacactttgcccctctttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttgtagctgagacga
aaggttggagcatctagagactgccatatccttggatccattccataatc
agcttccaaaagctgacagcattgcatgtactagcaagattttgctgaaa
ggacccagataatggctatcttctgtgagactttgctgggcctggcaaac
acacaagtggatgctcacaatcagcttattcaatggatcacagtgttccc
caaatggaaggagcctagagaaagttacatggagctgaaagggattctgc
aatcctataagtgggaaacaacaatataccctaacccaatacacccaccc
cccaccctgggagctgtgtctcttagggtgcgtaatgaatcaaagaatgc
cttagtttggccattcagtgcaaagagagagtctatggcttgtttcaaac
cttaattgctcagtaactagggaacttcagggcccagactgggcaatgtg
ttcgtggtttaataggggcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_26316798_26317500
seq2: B6Ng01-227G16.b_43_745 (reverse)

seq1  ACTCACACCCACCCACACACACATATTCACTATTGAAACCTTAGCACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACCCACCCACACACACATATTCACTATTGAAACCTTAGCACAGA  50

seq1  CTTAAACCTATGAAGGCACTGTGCCTGCTGTCATAGTCTCTGTGATTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAACCTATGAAGGCACTGTGCCTGCTGTCATAGTCTCTGTGATTTCA  100

seq1  AGTTCGTATGTGCATCAATCCTGTTGTATCTAGAAATCCTATTTTCTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGTATGTGCATCAATCCTGTTGTATCTAGAAATCCTATTTTCTTGG  150

seq1  AATCAACTCTCCCCTCTGGCTCTCACAACCTTTCTTCCTCTGCTTAGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTCTCCCCTCTGGCTCTCACAACCTTTCTTCCTCTGCTTAGTTC  200

seq1  CCTACCTTGAGGAAAGAATCAGTGAAAACATCCAATTCAGAATTTATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCTTGAGGAAAGAATCAGTGAAAACATCCAATTCAGAATTTATGCT  250

seq1  CCAAAGTTTCTAATTCTCTGTACATTGTTAATTCCTTCAAACTAAAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTTCTAATTCTCTGTACATTGTTAATTCCTTCAAACTAAAATTC  300

seq1  ACAGAGACATTTCTTTCTTATGACAGGGAAGAAGAGCAGATACCTTGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGACATTTCTTTCTTATGACAGGGAAGAAGAGCAGATACCTTGGTA  350

seq1  CCACCTGGTAACAGAAACTCCTTGCAATATAATGAAGGCCACAAAAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGGTAACAGAAACTCCTTGCAATATAATGAAGGCCACAAAAAGAT  400

seq1  TCATCTGCTGAATCTGTCCCTTTAGAAAAGTCTGCCATTGATGGAAAAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTGCTGAATCTGTCCCTTTAGAAAAGTCTGCCATTGATGGAAAAAC  450

seq1  AGCCTTTGGGGGGGGGGGGCACTGAACTTCCAGGGACACAACATCTATCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTTGGGGGGGGGGGGCACTGAACTTCCAGGGACACAACATCTATCC  500

seq1  AAAACTAAGGCAGAACAAGAACAATGGAGAAAATCCAACACTCTCAAGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAGGCAGAACAAGAACAATGGAGAAAATCCAACACTCTCAAGCC  550

seq1  ATTGTAGAACAACTGACAATAGTCCACTCAAGGATTGTAAGAGTGGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAGAACAACTGACAATAGTCCACTCAAGGATTGTAAGAGTGGAGAC  600

seq1  ATGTGAGGGTTAGATGCGAAGGAGAGGATCCAGCCTGAGGTAGAGTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGGGTTAGATGCGAAGGAGAGGATCCAGCCTGAGGTAGAGTCTCA  650

seq1  CATTGAGAAAAACTCTATGACAAAGCAGGAGCACACTGCACACAAGAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAGAAAAACTCTATGACAAAGCAGGAGCACACTGCACACAAGAGAA  700

seq1  TTC  703
      |||
seq2  TTC  703