BAC Information

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BAC

Clone NameB6Ng01-228C18
Chromosome3 (Build37)
Map Location 115,019,082 - 115,020,297
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043220, Olfm3
Downstream geneEG546808, Edg1, Dph5, LOC626061, Slc30a7, Extl2, Vcam1, Gpr88, Cdc14a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228C18.bB6Ng01-228C18.g
ACCGA041647GA041648
length1,220952
definitionB6Ng01-228C18.b B6Ng01-228C18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagttatgtaccttgattattatgagtctgttgatagggattg
aactgatggccctatgtatgttaggtaagtactcaccatggaactatatc
tccagttctacatgttctaccctgaacaatgttccatgtacaaaagagaa
gaacatgtattctgtaggtatcggaatgaatactccagatagaacaaatg
catggaatatgttacatccatttattccaaacacatgtctgaaccaattt
ttctttactgattttctgtctggatgatctgtcccctgtggaaagtagga
tgttggaatctattactgtaatgggatgtctccgattcattcttgttcat
tctctgtatctaaacattctaatattggcagcatatacatttacagtttc
tatatgtggctgataaacttacccaattataattacagatgggcactttt
tacgctagacacaatttggattgaatttcatttttctaatttaagaatag
aaattcctgccttttactgcatggatttatttatggggtggtagacacat
acagtaccatagcagagataaaagggtcagaggacaacttaggatgccca
gcacttctatgtttctactgtgtaggtcctagggctcaactcaggccatc
agacttatcagcaaatgcctttacacactaagcaatctccctggctgtgt
ttctgacagttttcttcattttttctttgcatacagtatttttttttctg
ttttatcacttttacgttcaccgtgtctttaaacctaaagtggctgtagt
tgagtcttaacttttaatctagtctcccactttatttcttcggattgaaa
aaaattaatatgtttatatttaagataattcatactttaactgataccat
ttttcattgttttcagttttctgttaatattttctttcttcttttattgt
gtatgtttgtatgtgtacataaattgtaactatttttctattgaatcatt
cattaacaaattattgatgtgataatattttttaatatcattgcccttta
ttgtttacactaaagatgttattttgcttttcagtcatcatcaccatatc
aaagttatttcaagattggactgttctttatttttcactgtctagcctta
cgtgggtttcctgtatttgggtgctttggtcttcttccatttagatttgc
caaaactggccttcttcata

gaattcctgatctttccaagacttttatcataaaggggtgttggactttg
ttgaatgctttctcagcatctaacgagatgatcatgtggttttgtctttc
agtttgtttatatagtggattacgttgatggatttccatatattaaacca
tccctgcatctctgggatgaagcctacatagcttggtgaaatagatataa
gtaatgtgttgatgggatgcagtaaataaaatcacaatataacttctgat
atcactaaaaggtacaacctcacagtaaacttcctgatactctgattcat
acactctttcctttccctcttctgtaatgtttcctgagccgtaggtataa
gactattttgtagatgtatctactaggactgaaatctaaaactctgcata
ttgattggttgtggttttctcttgtggtctctctccatctgttgcaaaga
gaaatttccttgatgagggatgaagactacacttatctttgggtttaaag
gcatacatttatagattgtttttacggattatcttggtttggtaaattag
tggttatagattctcctccaataatcacaagttcactagcacttaataat
agttagccacatttccagtaccaggaaaattttagccattgttgagcaag
tgttccatccaattatagagctgttggctactgccaaagtatgtgtgcca
ctactgcagctttagagtactgtgctctgctggccattgatgtggttcat
aaggcatagtagcagggtaggactattgattgctgctcatctttggaagc
tttgcatgtcacctttttctagtgccatgaaagctagtccctagggatgg
gactttcaaggtcagttccagctcaaggggtttctgagccctatttctga
aggttcatggtatcctcaccatatatgcagctggagccgtgtgtgctctt
cg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_115019082_115020297
seq2: B6Ng01-228C18.b_46_1265

seq1  GAATTCTAAGTTATGTACCTTGATTATTATGAGTCTGTTGATAGGGATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTTATGTACCTTGATTATTATGAGTCTGTTGATAGGGATTG  50

seq1  AACTGATGGCCCTATGTATGTTAGGTAAGTACTCACCATGGAACTATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATGGCCCTATGTATGTTAGGTAAGTACTCACCATGGAACTATATC  100

seq1  TCCAGTTCTACATGTTCTACCCTGAACAATGTTCCATGTACAAAAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTCTACATGTTCTACCCTGAACAATGTTCCATGTACAAAAGAGAA  150

seq1  GAACATGTATTCTGTAGGTATCGGAATGAATACTCCAGATAGAACAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGTATTCTGTAGGTATCGGAATGAATACTCCAGATAGAACAAATG  200

seq1  CATGGAATATGTTACATCCATTTATTCCAAACACATGTCTGAACCAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATATGTTACATCCATTTATTCCAAACACATGTCTGAACCAATTT  250

seq1  TTCTTTACTGATTTTCTGTCTGGATGATCTGTCCCCTGTGGAAAGTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTACTGATTTTCTGTCTGGATGATCTGTCCCCTGTGGAAAGTAGGA  300

seq1  TGTTGGAATCTATTACTGTAATGGGATGTCTCCGATTCATTCTTGTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGAATCTATTACTGTAATGGGATGTCTCCGATTCATTCTTGTTCAT  350

seq1  TCTCTGTATCTAAACATTCTAATATTGGCAGCATATACATTTACAGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTATCTAAACATTCTAATATTGGCAGCATATACATTTACAGTTTC  400

seq1  TATATGTGGCTGATAAACTTACCCAATTATAATTACAGATGGGCACTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTGGCTGATAAACTTACCCAATTATAATTACAGATGGGCACTTTT  450

seq1  TACGCTAGACACAATTTGGATTGAATTTCATTTTTCTAATTTAAGAATAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGCTAGACACAATTTGGATTGAATTTCATTTTTCTAATTTAAGAATAG  500

seq1  AAATTCCTGCCTTTTACTGCATGGATTTATTTATGGGGTGGTAGACACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCTGCCTTTTACTGCATGGATTTATTTATGGGGTGGTAGACACAT  550

seq1  ACAGTACCATAGCAGAGATAAAAGGGTCAGAGGACAACTTAGGATGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTACCATAGCAGAGATAAAAGGGTCAGAGGACAACTTAGGATGCCCA  600

seq1  GCACTTCTATGTTTCTACTGTGTAGGTCCTAGGGCTCAACTCAGGCCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTCTATGTTTCTACTGTGTAGGTCCTAGGGCTCAACTCAGGCCATC  650

seq1  AGACTTATCAGCAAATGCCTTTACACACTAAGCAATCTCCCTGGCTGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTATCAGCAAATGCCTTTACACACTAAGCAATCTCCCTGGCTGTGT  700

seq1  TTCTGACAGTTTTCTTCATTTTTTCTTTGCATACAGTATTTTTTTTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACAGTTTTCTTCATTTTTTCTTTGCATACAGTATTTTTTTTTCTG  750

seq1  TTTTATCACTTTTACGTTCACCGTGTCTTTAAACCTAAAGTGGCTGTAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCACTTTTACGTTCACCGTGTCTTTAAACCTAAAGTGGCTGTAGT  800

seq1  TGAGTCTTAACTTTTAATCTAGTCTCCCACTTTATTTCTTCGGATTGAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGAGTCTTAACTTTTAATCTAGTCTCCCACTTTATTTCTTCGGATTG-AA  849

seq1  AAAAATTAATATGTTTATATTTAAGATAATTCATAC-TTAACTGATACCA  899
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAAAATTAATATGTTTATATTTAAGATAATTCATACTTTAACTGATACCA  899

seq1  TTTTTCATTGTTTTCAGTTTTTCTGTTAATATTTTCTTTCTTCTTTTATT  949
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTTTTCATTGTTTTCAG-TTTTCTGTTAATATTTTCTTTCTTCTTTTATT  948

seq1  GTGTATGTTTGTATGTGTACAT-AATTGT-ACTATTTTTCTATTGAATCA  997
      |||||||||||||||||||||| |||||| ||||||||||||||||||||
seq2  GTGTATGTTTGTATGTGTACATAAATTGTAACTATTTTTCTATTGAATCA  998

seq1  TTCATTAACAAATTATTGATGTGATAAATATTTTAAATATCATTGCCCTT  1047
      |||||||||||||||||||||||||||   |||| |||||||||||||||
seq2  TTCATTAACAAATTATTGATGTGATAATATTTTTTAATATCATTGCCCTT  1048

seq1  TATTGTTTACACTAAAGATGT--ATGTGCTTTTTCAAGTCATCATCACCA  1095
      |||||||||||||||||||||   | |||||||   ||||||||||||||
seq2  TATTGTTTACACTAAAGATGTTATTTTGCTTTT--CAGTCATCATCACCA  1096

seq1  TATCAAAG-TATTTC-AGAATTGACTGTTCTT--ATTTTCACTG-CTAGC  1140
      |||||||| |||||| ||| | ||||||||||   ||||||||| |||||
seq2  TATCAAAGTTATTTCAAGATTGGACTGTTCTTTATTTTTCACTGTCTAGC  1146

seq1  TTACCGTGTG-TTCCTGTATTTTGGGTG-GTTGGTGTTCTTTCATTTAAA  1188
       |  |||| | |||||||| ||||||||  ||||| ||||| |||||| |
seq2  CTTACGTGGGTTTCCTGTA-TTTGGGTGCTTTGGTCTTCTTCCATTTAGA  1195

seq1  TTTG-CAAAACTGCCTTTCAAATTTCATA  1216
      |||| |||||||| | |||    ||||||
seq2  TTTGCCAAAACTGGCCTTC----TTCATA  1220


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