BAC Information

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BAC

Clone NameB6Ng01-228P09
Chromosome3 (Build37)
Map Location 64,290,154 - 64,290,272
singlet/doubletsinglet
Overlap gene4930518C23Rik
Upstream genePlch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869
Downstream geneEG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110, Kcnab1, Ssr3, EG433604
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228P09.bB6Ng01-228P09.g
ACCGA042236GA042237
length9551,189
definitionB6Ng01-228P09.b B6Ng01-228P09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatcccagggacccacataaagcaggatatggtagtgtatacg
tttaatctcagtactcctattggaagacagttgatgagaaataaagtccc
ctgtaatttgcatgccagctaacctaacatacaaagtgggaaataggaga
caatgtataaaataaaatacaaagtgagaaatatccccattcttttgttc
tgccttatatatgaacactgcagcataacaaacacagacccacattgtaa
gaatattttttctataatttattttttattcacattgcatcccaatcaca
gatcccccctcctcacctctcagtcttcccttgtaaattcctccccttat
taccccctcccctcctcagagaagtggaagcaccccttagataacagcac
actcagtgatagctagtccaagcagtactaaacatctgtcccactgaagc
caaaccaggcagtccaggtaggggaaggggattcagtggcagacaaaaga
gtcagagatagccaccgctctaatttttaggggctcaatatgaagaccaa
cgtgcacatctgctacaatgtgggagcttctgctaggtgtagcccctgca
tgtactttcatggttcagtctccataaggcacaggttagttgactctatt
tttttttgtggtatctattatgccttctatccctcattcttctttttttt
cctatttgtacattttttttttaattagctattttctcatttacatttcc
aatgctatcccaaaagtcccccataccctccccccccactcccgtaccaa
cccacttccacttttttggccctggcgttcccctgtactggggcatataa
agtttgcaagtccaatgagcctctcttttccagtgatgggctgactaggc
catcttctgaatacatatgcacctggagtcaagagctccagggtactggg
ttggt
gaattcaatgaaaaatggcatgacacacccaaatttatgggatacaatga
aaaaagtgctaataggaaagttcatagcattatctgcctctataaagaaa
ttagaaaattctcatatcagcaatttaaagtagtacacaagaaacctcta
ggggaaaaaaaggaaaatgaagcaaacacaccaaagaggaatagaaggca
agaaataatcacagtcaggtcccaaattaatcagttagaaacaaaggaaa
caatacgaagaatcaaagaaaccaagagctgtttctttgagaaaatcaac
aagagagataaacccttagccaaaccaactaaaatgcagagaaacagtat
ccaaagaaacaaaaccaaaaatgaaaaaggagacataacaactgacaatg
aggaaattcaaataatcattaggtcttacatcaaatacttcaaatacatg
tactccacatgattgaaataccttaatgaatgaacagctacaatgaaagt
gatacagatatcactttccaaagtcaagatccaatgaactatttaaacac
gccttagcccctaaagaaatagatgcagtcattaaaatatcaaaaattaa
ataaaaaataaaaaagcccaggtacagacttctaccagcctttcaatgaa
gaggtaattctaatagtactcaaattattccacaaaataggaacagaagg
aaccatatcaaactcattctatgagaccacagttactctaatacctaaac
cacacaaaaactcaacaaagaaagagaacatcaaacctattttttaaatt
aatatttgtagttaaactgctttggttcctgacatgtctcacatacactg
tgcctacccatgtctggccactttcctggatctgtacatgccagaagggc
tttcagtttcatctctctgcttccctgttatggcaattgccctcttcttc
cctgtctccccatccttttccctacacaatctaaatttcccattctctgt
ctttcttcccagcaattgctatatttccattctttatttcaatggaagcc
agctggtgggactggaaatgcagcttgggggagccgaaattagggccagc
cctcgaataacatccaaataacgttgatgcctaaatattcgaataattac
cttctgaagtgatttcgagaaactacattcatagggtcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_64290154_64290272
seq2: B6Ng01-228P09.b_786_957 (reverse)

seq1  TCAGAAGATGGCCTAGTCA-------------------------------  19
      |||||||||||||||||||                               
seq2  TCAGAAGATGGCCTAGTCAGCCCATCACTGGAAAAGAGAGGCTCATTGGA  50

seq1  ----------------------------------GCCAGGGCC-AAGAAG  34
                                        ||||||||| || |||
seq2  CTTGCAAACTTTATATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAAG  100

seq1  TGGGAGTGGGTGGGTGGGGGAGTGGGTGGGGGAGGGTGGGGGAGTGGGTG  84
      ||| ||||||| |||  ||||||||| ||||||||||           ||
seq2  TGGAAGTGGGTTGGTACGGGAGTGGG-GGGGGAGGGT----------ATG  139

seq1  GGGGAGACTTTTGGGATAGCATTGGAAATGTAAAT  119
      |||  ||||||||||||||||||||||||||||||
seq2  GGG--GACTTTTGGGATAGCATTGGAAATGTAAAT  172