BAC Information

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BAC

Clone NameB6Ng01-229B12
Chromosome3 (Build37)
Map Location 76,144,025 - 76,145,165
singlet/doubletsinglet
Overlap geneFstl5
Upstream geneWdr49, Pdcd10, Serpini1, Golph4
Downstream geneLOC100041625, LOC100041635
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229B12.bB6Ng01-229B12.g
ACCGA042334GA042335
length1,1401,127
definitionB6Ng01-229B12.b B6Ng01-229B12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccacactaaaaccattatagtgcagtttaaatagtttacctgatt
ttgatttaactgtggtaagtggtatctttctagaaaatcctccatttctt
tttttattttcgaattatgtagaatacgggcttttggagtaacacctaat
gattctttgaatttcctcagtgtctgttattatgatttcaccttttcatt
tctgattttgtttattcaggtactgtctctctgtcttttggtcagtttgg
ctaagggtttgtctatctttttaattttctcaaaaacaaacaaacaaaaa
taacaaacatgttttggttttcttaattctttgtattgtctttgtttcta
actgattgatttcagccctaatgttgattgtttcctgccttctacttgtt
ttggtgtactcttcctcctcctcctcctcctcctcctcctcttcttcttc
ctcctcctcttattactcttcttctttcttcttctttcttcttcttcttc
tcctccttctcctcctcctccactttctcttcctctcctctctctccttc
ttcttctttttcttctccttcttttcttgagctttcaagtatacttttaa
attgctggtatgagaattttctattattttttatggaggtacttagtgct
atgaaagttcctcttagccgtgctttcattgtgttccataaatatgggta
tgtgtgtcttcattttcattgtattctagaaagtccttatttttctcttt
ttgtttcttctctgacccaaagatcattaagtagaaagctgttcaatttc
gatgagtgtgtaggctttccagtattttctcttattactgaagtccagat
ttaatctatgatgttttgataagatgcaagggagacatttcaattttctt
gtatcgattaaaggcttcttttatgaccaaccatgcggtcattttggaag
aagtgtccatgagatgctaagaagaatgatatatctttgagttaaggtaa
atatttctatagaatgctgttacgatagttgaattgcaatgtcgttcagt
tcatttatttcccttctgtaaagctatgttgagattttcaatggaatgtg
ggtgaatgagcctaccactataggtgaggattaaggccta
gaattcttttggaaaattgttttaatattggcttctcagaaataaagatg
tggctttaccaactattctgggacaaaataaaaacctttactaactagaa
tagaagaaatacatataaataaatctgttgatgatttcaaagacagaaaa
attttaaggagtaactgttgatggcacaaggagcacactgccattttcat
ttgctcttcctttttttttttaattattttattttatttcttttacttat
ttagtttacatgttgctagcttgctacctcctggccagccccttccacaa
tccttagctcctcatcccttcccctttcctcctctgaatgaatgggggct
gtctatgtatccaccctccctggcacatcaaggctctaaagagctagata
catcctctcccactgagactagacaaggcaacccagctagaacatatcct
atgtacaggcaacaagtattgggatagccccctttccagttgtttgtgac
ccacatgaagaccaagctgcatatcttctacatatgcatggggaggccta
gcttcaattagtatatgctatttgattggtggttcagactcaaagagtct
caaaggcccaggttagttgattctgttgttcttgtggagttcctatcccc
tttgggaccggaatccttcctcctatacttccataaaagtccccaagctc
catccgctatttggctgtgggtgtctgtatctgagtttgctcactttaat
aggtcttgtcagttcattaggaattactcttttaacagggaccacagtaa
ctatacagtgtccagagacagttattaagttaccagataagagaaactgc
tcactttttcatgttgaaatactttagtcattatcattctattgttctat
tgatcataattgggcttaattttagtgtgcattgatgacaccattatgac
cacaagccaaaaactatacagatataccaaagtattagcttagggttaat
attagtatggaatacagacttaaaatttgagcttcttctttaatagatct
gtatgccaatggtacaataaatgtttatcatctagaagtgccaggtccag
ctgtacactccgattgtaagtctgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_76144025_76145165
seq2: B6Ng01-229B12.g_66_1192

seq1  GAATTCTTTTGGAAAATTGTTTTAATATTGGCTTCTCAGAAATAAAGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGAAAATTGTTTTAATATTGGCTTCTCAGAAATAAAGATG  50

seq1  TGGCTTTACCAACTATTCTGGGACAAAATAAAAACCTTTACTAACTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTACCAACTATTCTGGGACAAAATAAAAACCTTTACTAACTAGAA  100

seq1  TAGAAGAAATACATATAAATAAATCTGTTGATGATTTCAAAGACAGAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGAAATACATATAAATAAATCTGTTGATGATTTCAAAGACAGAAAA  150

seq1  ATTTTAAGGAGTAACTGTTGATGGCACAAGGAGCACACTGCCATTTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGGAGTAACTGTTGATGGCACAAGGAGCACACTGCCATTTTCAT  200

seq1  TTGCTCTTCCTTTTTTTTTTTAATTATTTTATTTTATTTCTTTTACTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTCCTTTTTTTTTTTAATTATTTTATTTTATTTCTTTTACTTAT  250

seq1  TTAGTTTACATGTTGCTAGCTTGCTACCTCCTGGCCAGCCCCTTCCACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTTACATGTTGCTAGCTTGCTACCTCCTGGCCAGCCCCTTCCACAA  300

seq1  TCCTTAGCTCCTCATCCCTTCCCCTTTCCTCCTCTGAATGAATGGGGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGCTCCTCATCCCTTCCCCTTTCCTCCTCTGAATGAATGGGGGCT  350

seq1  GTCTATGTATCCACCCTCCCTGGCACATCAAGGCTCTAAAGAGCTAGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATGTATCCACCCTCCCTGGCACATCAAGGCTCTAAAGAGCTAGATA  400

seq1  CATCCTCTCCCACTGAGACTAGACAAGGCAACCCAGCTAGAACATATCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCTCCCACTGAGACTAGACAAGGCAACCCAGCTAGAACATATCCT  450

seq1  ATGTACAGGCAACAAGTATTGGGATAGCCCCCTTTCCAGTTGTTTGTGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACAGGCAACAAGTATTGGGATAGCCCCCTTTCCAGTTGTTTGTGAC  500

seq1  CCACATGAAGACCAAGCTGCATATCTTCTACATATGCATGGGGAGGCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGAAGACCAAGCTGCATATCTTCTACATATGCATGGGGAGGCCTA  550

seq1  GCTTCAATTAGTATATGCTATTTGATTGGTGGTTCAGACTCAAAGAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAATTAGTATATGCTATTTGATTGGTGGTTCAGACTCAAAGAGTCT  600

seq1  CAAAGGCCCAGGTTAGTTGATTCTGTTGTTCTTGTGGAGTTCCTATCCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGCCCAGGTTAGTTGATTCTGTTGTTCTTGTGGAGTTCCTATCCCC  650

seq1  TTTGGGACCGGAATCCTTCCTCCTATACTTCCATAAAAGTCCCCAAGCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGACCGGAATCCTTCCTCCTATACTTCCATAAAAGTCCCCAAGCTC  700

seq1  CATCCGCTATTTGGCTGTGGGTGTCTGTATCTGAGTTTGCTCACTTTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGCTATTTGGCTGTGGGTGTCTGTATCTGAGTTTGCTCACTTTAAT  750

seq1  AGGTCTTGTCAGTTCATTAGGAATTACTCTTTTAACAGGGACCACAGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTTGTCAGTTCATTAGGAATTACTCTTTTAACAGGGACCACAGTAA  800

seq1  CTATACAGTGTCCAGAGACAGTTATTAAGTTACCAGATAAGAGAAACTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGTGTCCAGAGACAGTTATTAAGTTACCAGATAAGAGAAACTGC  850

seq1  TCACTTTTTCATGTTGAAATACTTTAGTCATTATCATTCTATTGTTCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTTTCATGTTGAAATACTTTAGTCATTATCATTCTATTGTTCTAT  900

seq1  TGATCATAATT-GGCTTAATTTTAGTGTGCATTGATGACACCATTATGAC  949
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TGATCATAATTGGGCTTAATTTTAGTGTGCATTGATGACACCATTATGAC  950

seq1  CACAAGCCAAAAACTATACAAGAATAATACCAAAGTATTAAGCTTAGGGT  999
      ||||||||||||||||||| |||   ||||||||||||| ||||||||||
seq2  CACAAGCCAAAAACTATAC-AGA--TATACCAAAGTATT-AGCTTAGGGT  996

seq1  TAATATTAGTATGGAATACAGAACTTAAAATTTGAGCTTC-TCTTTAATT  1048
      ||||||||||||||||||||| |||||||||||||||||| |||||||| 
seq2  TAATATTAGTATGGAATACAG-ACTTAAAATTTGAGCTTCTTCTTTAAT-  1044

seq1  AGGGTTCTTGTTATGCAAATGGTAC-ATAAATGTTTTATTCATTCTTAAG  1097
         | |||   ||||| |||||||| ||||||||||   ||||   ||  
seq2  --AGATCT--GTATGCCAATGGTACAATAAATGTTT--ATCAT--CTAGA  1086

seq1  AGTGCCAAGTTCAGCTGTACACTCAGAATTGTAGAGTCCTGCCT  1141
      ||||||| || ||||||||||||| | |||||| ||| ||||||
seq2  AGTGCCAGGTCCAGCTGTACACTCCG-ATTGTA-AGT-CTGCCT  1127