BAC Information

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BAC

Clone NameB6Ng01-229G09
Chromosome3 (Build37)
Map Location 119,589,251 - 119,590,462
singlet/doubletsinglet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229G09.bB6Ng01-229G09.g
ACCGA042559GA042560
length1,2141,176
definitionB6Ng01-229G09.b B6Ng01-229G09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagattttatagtgatttttcttttattgcagtgtaggagtctt
aagaattctataaaatagataaggcagtttctatattctgcattgtagga
agacaatagggagtagatatgatttactgaaggcacctgtaagccagatg
tttaaacgttctgcaaactgacacatccattcctgtccaagcactgtgaa
ctgggtattgttctgatttacagatgaaaaaacaaaatgacaccacaggg
ttgtgtatctactcagtgttgcatagctagaaatattggatctgtggctg
gagggataactcagcagttaaaaacccttactgctttcctggaggactag
agtttggttcccagcatcctacttgggtgactcagaacctcctgaaactt
ctgctccagaggaccaggctcccccttctggcctctgggagaagtgtatt
tatgtgcacatatccccacatagacacatttaattaaaaataaaaccttt
aaaagatgttagagctgagattcaagttgaagaccaattcttactggatc
atttttgcacatgtgaaacctacattttacaaaagataggtcactgtgct
tacttggatcaaaaccctggtaaagggccagaatgatagagagagataac
ccagggcaaaagtacttgcaggcaaatctgataacataagttctactact
gagctaatgtgatgcaaaaaggagaagtggctctttcaaggtgtatatgg
acctccacacatgttaaacaaacaaacaaacgaacaaataatgaaatcct
ggtaaggaataatgaagaaattaaaattacatccatctggagttgggtag
gagggggcacggaacaatgggtaacacatctgactcccagaatgaaaagt
cactctaaattgtaactcttaaccattttatcactctctctactttaaat
tcttttctcacttttgatttgataccagatacttaaggtgatgtgttgct
catgtagctacaacatagaaatgaatatgtgacatctttctcctaccata
tgattctgaacgactttttctatttttgtagcttcatgtggttatagatg
aattggttaatgttcagatatttcccgaagaagttgagaaattttatgaa
taccatgtatatgcaatgttttccaatcactaagtattaagtgaatgttt
ccaaatgtattagt
gaattccaggacaatgttagaaatcaaagtgggaagggtcttccctgtct
tattctaattaggaaagttctacacagccagcaaacagcctctgcataga
gaggggttcctgaggactatttgggagtggtttaagaagttactcaaagg
caatcatgggtacaaactgagagttctctagtctgctcctagactagaga
tggctcctagacagctctctggtcgagaaagttttctcttgctagaaaaa
atctgaaagctctctgaattgctctctgggttttctgaccaaagttagaa
aagctgctagaaaaaaaaaatcttagcttttctaaccaaaatcagagagc
ctgtcagacaaattctaaaaagaaaactgcagtagctctctgctagccca
tttcttacagaccaaaagcccagatttttttttaacataacaaatggatt
cagagatctgtctgtccttgtaagcacagacaataagctagctgggtggg
atcttactctaagatcaccattcccacgtcgcgtaggctctgtctcaggc
tgaccttgaactgagaatcttgcctgcctttataagcacaaagaataaac
ttagctgaaagggatcttgccttgcaattaccactccctaaatctctttg
tccccttccttagcatctttctgacaagctggctcatagtgaagctacca
ctcttcttttaggtccatgtgaagcccctcatatagttcatattgcattc
ttatagtttgcattgttggcaagttttacattcttgaactcatttttttt
ttgagttcttccccacagcctaaagggttgtcctgaatgtcatagtattt
accattttgctaagggctttggacacacctttcacttcctagattcatgc
tgcttctaattatcatggactcattaacccttgtcaggagaaatattttt
ccgaggagacatgaagatgtgtacatatatacaaacagcttatgcctaga
aacatcacacctcctagagatccacaccgtgctagctctgctcagcatac
actgccttcccagcagcatgccgactcagcatcaccacctaacttagtag
tgatgtaatttcccaggttcttggaacctctcccaactctaatctgaaag
ttaattatgaaccaccattcgcgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119589251_119590462
seq2: B6Ng01-229G09.b_46_1259

seq1  GAATTCCAGATTTTATAGTGATTTTTCTTTTATTGCAGTGTAGGAGTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTTTATAGTGATTTTTCTTTTATTGCAGTGTAGGAGTCTT  50

seq1  AAGAATTCTATAAAATAGATAAGGCAGTTTCTATATTCTGCATTGTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTCTATAAAATAGATAAGGCAGTTTCTATATTCTGCATTGTAGGA  100

seq1  AGACAATAGGGAGTAGATATGATTTACTGAAGGCACCTGTAAGCCAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATAGGGAGTAGATATGATTTACTGAAGGCACCTGTAAGCCAGATG  150

seq1  TTTAAACGTTCTGCAAACTGACACATCCATTCCTGTCCAAGCACTGTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACGTTCTGCAAACTGACACATCCATTCCTGTCCAAGCACTGTGAA  200

seq1  CTGGGTATTGTTCTGATTTACAGATGAAAAAACAAAATGACACCACAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTATTGTTCTGATTTACAGATGAAAAAACAAAATGACACCACAGGG  250

seq1  TTGTGTATCTACTCAGTGTTGCATAGCTAGAAATATTGGATCTGTGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTATCTACTCAGTGTTGCATAGCTAGAAATATTGGATCTGTGGCTG  300

seq1  GAGGGATAACTCAGCAGTTAAAAACCCTTACTGCTTTCCTGGAGGACTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGATAACTCAGCAGTTAAAAACCCTTACTGCTTTCCTGGAGGACTAG  350

seq1  AGTTTGGTTCCCAGCATCCTACTTGGGTGACTCAGAACCTCCTGAAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGTTCCCAGCATCCTACTTGGGTGACTCAGAACCTCCTGAAACTT  400

seq1  CTGCTCCAGAGGACCAGGCTCCCCCTTCTGGCCTCTGGGAGAAGTGTATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCAGAGGACCAGGCTCCCCCTTCTGGCCTCTGGGAGAAGTGTATT  450

seq1  TATGTGCACATATCCCCACATAGACACATTTAATTAAAAATAAAACCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGCACATATCCCCACATAGACACATTTAATTAAAAATAAAACCTTT  500

seq1  AAAAGATGTTAGAGCTGAGATTCAAGTTGAAGACCAATTCTTACTGGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGTTAGAGCTGAGATTCAAGTTGAAGACCAATTCTTACTGGATC  550

seq1  ATTTTTGCACATGTGAAACCTACATTTTACAAAAGATAGGTCACTGTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGCACATGTGAAACCTACATTTTACAAAAGATAGGTCACTGTGCT  600

seq1  TACTTGGATCAAAACCCTGGTAAAGGGCCAGAATGATAGAGAGAGATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGATCAAAACCCTGGTAAAGGGCCAGAATGATAGAGAGAGATAAC  650

seq1  CCAGGGCAAAAGTACTTGCAGGCAAATCTGATAACATAAGTTCTACTACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCAAAAGTACTTGCAGGCAAATCTGATAACATAAGTTCTACTACT  700

seq1  GAGCTAATGTGATGCAAAAAGGAGAAGTGGCTCTTTCAAGGTGTATATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAATGTGATGCAAAAAGGAGAAGTGGCTCTTTCAAGGTGTATATGG  750

seq1  ACCTCCACACATGTTAAACAAACAAACAAACGAACAAATAATGAAATCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCACACATGTTAAACAAACAAACAAACGAACAAATAATGAAATCCT  800

seq1  GGTAAGGAATAATGAAGAAATTAAAATTACATCCATCTGGAGTTGGGTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAGGAATAATGAAGAAATTAAAATTACATCCATCTGGAGTTGGGTAG  850

seq1  GAGGGGGCACGGAACAATGGGTAACACATCTGACTCCCAGAATGAAAAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGCACGGAACAATGGGTAACACATCTGACTCCCAGAATGAAAAGT  900

seq1  CACTCTAAATTGTAACTCTTAACCATTTTATCACTCTCTCTACTTTAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAAATTGTAACTCTTAACCATTTTATCACTCTCTCTACTTTAAAT  950

seq1  TCTTTTCTCACTTTTGATTTGATACCAGATACTTAAGGTGATGTGTTGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCTCACTTTTGATTTGATACCAGATACTTAAGGTGATGTGTTGCT  1000

seq1  CAATGTTAGCTACAACATAGAAATG-ATATGTTGACATCTTTCTCCTACC  1049
      | ||| ||||||||||||||||||| ||||| ||||||||||||||||||
seq2  C-ATG-TAGCTACAACATAGAAATGAATATG-TGACATCTTTCTCCTACC  1047

seq1  ATATGATTCTGAACGACTTTTTCTA-TTTTGTAGCTTTCATGTG--TATA  1096
      ||||||||||||||||||||||||| ||||||||| ||||||||  ||||
seq2  ATATGATTCTGAACGACTTTTTCTATTTTTGTAGC-TTCATGTGGTTATA  1096

seq1  GATGAA-TGGTTAATGTTCAGAATATT---CAGAGAAGTTGGAGAAA-TT  1141
      |||||| |||||||||||||| |||||   |  ||||||| |||||| ||
seq2  GATGAATTGGTTAATGTTCAG-ATATTTCCCGAAGAAGTT-GAGAAATTT  1144

seq1  TATG-ATACATTGTATATGGAAATGTTTCATAATCACTAAGGTATTTAGT  1190
      |||| ||||  ||||||| | |||||||   ||||||||| ||||| |||
seq2  TATGAATACCATGTATAT-GCAATGTTTTCCAATCACTAA-GTATTAAGT  1192

seq1  GAATGTTTCAAAATGTATTAGT  1212
      ||||||||| ||||||||||||
seq2  GAATGTTTCCAAATGTATTAGT  1214