BAC Information

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BAC

Clone NameB6Ng01-229I03
Chromosome3 (Build37)
Map Location 63,093,722 - 63,094,838
singlet/doubletsinglet
Overlap genenone
Upstream gene4631416L12Rik, Dhx36, Gpr149, LOC676984, LOC666967
Downstream geneMme, Plch1, LOC100040836, E130311K13Rik, Slc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229I03.bB6Ng01-229I03.g
ACCGA042632GA042633
length3231,128
definitionB6Ng01-229I03.b B6Ng01-229I03.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttatatgtatgttatcactctattgggtgtgtagttggtataaaaaatt
tcaattctgctactttgtctaaatgatggtatactttgctctatggaagt
tttttttttttcagttttatgaggtcacatttaattgttgacatgagtgc
ctgtgctaatcatggtcctattcaaaaagtcttcacctgtgccaatgagt
tctcatgatgtgctgcggatgggcggagtggtggagagaatacagagagc
tacagtaggtggtctgtatagagctgtggatgagaccgagggattggatt
tggaggagaggagggggagggaa
gaattcctttacaagtgttttattgacaatttttgtgtctttatctcttt
agttaacaagacaatattggcctgaccagatggatttgtttatacttttt
attcctgttttgtggaataaaattgacaaatactagtatttcatcttcct
tgagtgaatgatgggagcatgtgggaaggagaacaggaaaagatgcagat
ggtgaagaagggcagatgtagataaaggtacgtggactgtggactgggtt
ataaagttcattttcccctagttttaactaactttttttttccttccatg
ttctgtggtggatatagaaatgtaattgatagtcatgaatcttcatggct
tcagaatgcttatgctaattccatgggagttcattgagatataaggagtt
taggtaggggcaggtgcttgtttgagtggctagactaatctagccacata
gtggtttgattttgttgttgttgttttgcaagtttattacaacaaagtta
tttttataaaaattgtttgatagagctcagtagtgactccatctggccct
aggttttttctttgtagggaaacttttaattgctgcttcaatctcttctc
tcactatgggcctatttaaattatttatatcttctggatttaatttaggc
aagtgatatgtgtttagaaatttattcgtttgtctaggtttttttcatac
tattttctaatgaccatctgggtttcattggaatctgttgttacttatgt
tttgcatcttttctccctttacattcttaacttctttttctaataacaaa
ttttgtaggtttatttatttatagttctgagtattaaatgggagggtcct
gataaaactaggcaagagctctaactgagatattaactagccccactgcc
tcttcctcctttcctaacttcttaaggataaagattcatttcaacaattc
cagtctttctcatttagggtacagcattgaaattaaatactctgttagat
gcctcatgacatgtattattgatataatactttggcctgccttagtttaa
ggtcatcttggtgaagaagggaggctcaattgaagaaaattgcctctctc
aaaacattcaagctgttgacaagcctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63093722_63094838
seq2: B6Ng01-229I03.g_69_1196

seq1  GAATTCCTTTACAAGTGTTTTATTGACAATTTTTGTGTCTTTATCTCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTACAAGTGTTTTATTGACAATTTTTGTGTCTTTATCTCTTT  50

seq1  AGTTAACAAGACAATATTGGCCTGACCAGATGGATTTGTTTATACTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAACAAGACAATATTGGCCTGACCAGATGGATTTGTTTATACTTTTT  100

seq1  ATTCCTGTTTTGTGGAATAAAATTGACAAATACTAGTATTTCATCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGTTTTGTGGAATAAAATTGACAAATACTAGTATTTCATCTTCCT  150

seq1  TGAGTGAATGATGGGAGCATGTGGGAAGGAGAACAGGAAAAGATGCAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAATGATGGGAGCATGTGGGAAGGAGAACAGGAAAAGATGCAGAT  200

seq1  GGTGAAGAAGGGCAGATGTAGATAAAGGTACGTGGACTGTGGACTGGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGAAGGGCAGATGTAGATAAAGGTACGTGGACTGTGGACTGGGTT  250

seq1  ATAAAGTTCATTTTCCCCTAGTTTTAACTAACTTTTTTTTTCCTTCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTCATTTTCCCCTAGTTTTAACTAACTTTTTTTTTCCTTCCATG  300

seq1  TTCTGTGGTGGATATAGAAATGTAATTGATAGTCATGAATCTTCATGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGGTGGATATAGAAATGTAATTGATAGTCATGAATCTTCATGGCT  350

seq1  TCAGAATGCTTATGCTAATTCCATGGGAGTTCATTGAGATATAAGGAGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATGCTTATGCTAATTCCATGGGAGTTCATTGAGATATAAGGAGTT  400

seq1  TAGGTAGGGGCAGGTGCTTGTTTGAGTGGCTAGACTAATCTAGCCACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGGGGCAGGTGCTTGTTTGAGTGGCTAGACTAATCTAGCCACATA  450

seq1  GTGGTTTGATTTTGTTGTTGTTGTTTTGCAAGTTTATTACAACAAAGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTTGATTTTGTTGTTGTTGTTTTGCAAGTTTATTACAACAAAGTTA  500

seq1  TTTTTATAAAAATTGTTTGATAGAGCTCAGTAGTGACTCCATCTGGCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATAAAAATTGTTTGATAGAGCTCAGTAGTGACTCCATCTGGCCCT  550

seq1  AGGTTTTTTCTTTGTAGGGAAACTTTTAATTGCTGCTTCAATCTCTTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTTTCTTTGTAGGGAAACTTTTAATTGCTGCTTCAATCTCTTCTC  600

seq1  TCACTATGGGCCTATTTAAATTATTTATATCTTCTGGATTTAATTTAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGGGCCTATTTAAATTATTTATATCTTCTGGATTTAATTTAGGC  650

seq1  AAGTGATATGTGTTTAGAAATTTATTCGTTTGTCTAGGTTTTTTTCATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGATATGTGTTTAGAAATTTATTCGTTTGTCTAGGTTTTTTTCATAC  700

seq1  TATTTTCTAATGACCATCTGGGTTTCATTGGAATCTGTTGTTACTTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTAATGACCATCTGGGTTTCATTGGAATCTGTTGTTACTTATGT  750

seq1  TTTGCATCTTTTCTCCCTTTACATTCTTAACTTCTTTTTCTAATAACAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATCTTTTCTCCCTTTACATTCTTAACTTCTTTTTCTAATAACAAA  800

seq1  TTTTGTAGGTTTATTTATTTATAGTTCTGAGTATTAAAT-GGAGGGTCCT  849
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TTTTGTAGGTTTATTTATTTATAGTTCTGAGTATTAAATGGGAGGGTCCT  850

seq1  GATAAAACTAGGCAAGAGCTCTAACTGAGATA-TAACTAGCCCCACTGCC  898
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GATAAAACTAGGCAAGAGCTCTAACTGAGATATTAACTAGCCCCACTGCC  900

seq1  TCTTCCTCCTTT-CTAACTTCTTAA-GATAAAGATTCATTTCAACAAATT  946
      |||||||||||| |||||||||||| ||||||||||||||||||| ||||
seq2  TCTTCCTCCTTTCCTAACTTCTTAAGGATAAAGATTCATTTCAAC-AATT  949

seq1  CCAGTCTTTCTCA-TTAAGGTACAAGCATTTAAAATTTAAATACTCTGTT  995
      ||||||||||||| ||| ||||| |||||| |||  ||||||||||||||
seq2  CCAGTCTTTCTCATTTAGGGTAC-AGCATTGAAA--TTAAATACTCTGTT  996

seq1  AGATGCCTCAATTGACATGTA-TATTGATAT-ATAC-TTGGGCTGCCTAG  1042
      ||||||||||  ||||||||| ||||||||| |||| |||| ||||||  
seq2  AGATGCCTCA--TGACATGTATTATTGATATAATACTTTGGCCTGCCTTA  1044

seq1  TTTTAAAGTCATCT--GTG-AGAAGGGAGGCTCAATTG-AGAAAA-TGCC  1087
       ||||| |||||||  ||| |||||||||||||||||| |||||| ||||
seq2  GTTTAAGGTCATCTTGGTGAAGAAGGGAGGCTCAATTGAAGAAAATTGCC  1094

seq1  TC---CAAAACA-TCAGGCTGTTGACAAGCCTGT  1117
      ||   ||||||| ||| |||||||||||||||||
seq2  TCTCTCAAAACATTCAAGCTGTTGACAAGCCTGT  1128