BAC Information

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BAC

Clone NameB6Ng01-229M11
Chromosome3 (Build37)
Map Location 110,893,485 - 110,894,614
singlet/doubletsinglet
Overlap genenone
Upstream geneNtng1, LOC100043181, LOC100043183, Prmt6
Downstream geneLOC100043190, LOC668712, LOC625585
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229M11.bB6Ng01-229M11.g
ACCGA042818GA042819
length1,2161,120
definitionB6Ng01-229M11.b B6Ng01-229M11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctagatctgccagcttctaccttggattaaaataactttggccta
aactatgcatacatatttcaagttcagtctacaggttccttcatcaacta
tgcactaccatcactaccatataaatggttctaagaagacagtgtaatct
tcctttacaattctgactagagcaattaaaacatttcaatacattgaatt
ccaggaggggctcattttaagtaatgtgtgtctacacaaaacttccagaa
acttttctgatttgataatgaaggaataggtctggaaattaaaatatctc
taaagtctatatttgaagaagtatgaaatttctctgtgacaacttactgg
cagaatgcatagtattcaataatttgatttttcctgagagatatatctga
ctaatagcctaacctacagaaaattgtctactatctctaaatgttgtggg
aagccacaaacgccattacaagatggtgctggtttcaataagccgactcc
catgaatatgggtaaacaaccaatgtgcgcatgtgccatagggttttttg
ctgagtcactgcctggcccgaggcatgtgggtggggtactgaaagcataa
ccaatcaagtatagacacgcctctcctaggcctatataagcagcgccatt
tccggggttcagggtcttcctcctaatgaagcaataaagcttgctgcaga
agaatgctgtcttctttccactggatggttttagctcccttgtcaaagat
caagtaaccataggtgtgtgggttcatttctgggtcttcaattcttttcc
attgatcttcttgtctgtcattgtaccagtactctgcaatttttttgttt
gttttttttttgttttgttttgttttggtttgtttgttgttttatcacaa
tttctctgtagtacaatttgagatcagtatggtgattcaaccagaggttc
ttttattgttgagaatagttttgctatcctaggtttttgttatgaagatg
atttgcaaatgccctttctactctgtgagattggagttggattatgggga
ttgtattgatctggtgaatgcttcagcagattggcatttgtctaattaat
ctggcaatccatggccatggagatctttcaatctctagacttcatgggac
ctttcttcagggactgagtctcatacgacctcaatcttgagtccaccgat
aagttgatataattct

gaattcagtttgcgagaaacttattgagtatttttgcatcaatattctta
agggaaattggtctgaaattctctttctttgttgtgtctttgtgtgtctt
tgatatcagcataactgttgcttcatagcccaaattgggtggtgttcctt
cttcttctatgaaatagtttgaagagtattggcattaggtctcctttctt
gttcatgctatgtttaggcagccatactgatgggactcataattttagtt
tctctgacatttggagaaaataaaatattcctgttcctctggcttttaca
tttccaccaatcctttgtcatgatccctgagctttacattcagcatatat
gctgtcattaagtttattactcatccttcatcaaagacgtgtctctttat
aacagatatcactacaaaaaataccactgattatactttagagaacaagt
gaccatgttgtgcccagcactaacttacatagttttgaaatgcttaatca
tactgccttctttccatcactcacatcaggtaatctcaggtttcctaata
tttaaaagaaaagaggaatccctgtctatgttttccacataaagacggca
ttccaattgtattttctctcaggtacttttaatttttgtaaacttttgtt
ttcttttttgtttgaatattttatttatttacattttgaatgttatcctc
tttcttggtttcccctttggaaacctcctatccaattctcatcacaccct
gcttctataaagggtgattccgcagtcaactcttgcctctcctttctggc
attacactggggtattgagccttccctgaactaaaagcctttctttccag
tggttctagataagaccaacctctgctacatatgccagaggtctcttcat
gtgtactctttgggttgatggttttgtccatgggatctctggacttccgg
ttagttgatatgtgttcttcctatggggttgcaccccttcatctccttag
tcttccctatctctggggtcatgtatgtggatatcatgtgtttaccatgt
atggtgtctagatgctaccactatttatatttcatgtagaaaattagaat
ttaagcttattttaattatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_110893485_110894614
seq2: B6Ng01-229M11.g_67_1186

seq1  GAATTCAGTTTGCGAGAAACTTATTGAGTATTTTTGCATCAATATTCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTTGCGAGAAACTTATTGAGTATTTTTGCATCAATATTCTTA  50

seq1  AGGGAAATTGGTCTGAAATTCTCTTTCTTTGTTGTGTCTTTGTGTGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATTGGTCTGAAATTCTCTTTCTTTGTTGTGTCTTTGTGTGTCTT  100

seq1  TGATATCAGCATAACTGTTGCTTCATAGCCCAAATTGGGTGGTGTTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCAGCATAACTGTTGCTTCATAGCCCAAATTGGGTGGTGTTCCTT  150

seq1  CTTCTTCTATGAAATAGTTTGAAGAGTATTGGCATTAGGTCTCCTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTATGAAATAGTTTGAAGAGTATTGGCATTAGGTCTCCTTTCTT  200

seq1  GTTCATGCTATGTTTAGGCAGCCATACTGATGGGACTCATAATTTTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGCTATGTTTAGGCAGCCATACTGATGGGACTCATAATTTTAGTT  250

seq1  TCTCTGACATTTGGAGAAAATAAAATATTCCTGTTCCTCTGGCTTTTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGACATTTGGAGAAAATAAAATATTCCTGTTCCTCTGGCTTTTACA  300

seq1  TTTCCACCAATCCTTTGTCATGATCCCTGAGCTTTACATTCAGCATATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACCAATCCTTTGTCATGATCCCTGAGCTTTACATTCAGCATATAT  350

seq1  GCTGTCATTAAGTTTATTACTCATCCTTCATCAAAGACGTGTCTCTTTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCATTAAGTTTATTACTCATCCTTCATCAAAGACGTGTCTCTTTAT  400

seq1  AACAGATATCACTACAAAAAATACCACTGATTATACTTTAGAGAACAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGATATCACTACAAAAAATACCACTGATTATACTTTAGAGAACAAGT  450

seq1  GACCATGTTGTGCCCAGCACTAACTTACATAGTTTTGAAATGCTTAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGTTGTGCCCAGCACTAACTTACATAGTTTTGAAATGCTTAATCA  500

seq1  TACTGCCTTCTTTCCATCACTCACATCAGGTAATCTCAGGTTTCCTAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCTTCTTTCCATCACTCACATCAGGTAATCTCAGGTTTCCTAATA  550

seq1  TTTAAAAGAAAAGAGGAATCCCTGTCTATGTTTTCCACATAAAGACGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAGAAAAGAGGAATCCCTGTCTATGTTTTCCACATAAAGACGGCA  600

seq1  TTCCAATTGTATTTTCTCTCAGGTACTTTTAATTTTTGTAAACTTTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATTGTATTTTCTCTCAGGTACTTTTAATTTTTGTAAACTTTTGTT  650

seq1  TTCTTTTTTGTTTGAATATTTTATTTATTTACATTTTGAATGTTATCCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTGTTTGAATATTTTATTTATTTACATTTTGAATGTTATCCTC  700

seq1  TTTCTTGGTTTCCCCTTTGGAAACCTCCTATCCAATTCTCATCACACCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGTTTCCCCTTTGGAAACCTCCTATCCAATTCTCATCACACCCT  750

seq1  GCTTCTAT-AAGGGTGATTCCGCAGTCAACTCTTGCCTCTCCTTTCTGGC  799
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTATAAAGGGTGATTCCGCAGTCAACTCTTGCCTCTCCTTTCTGGC  800

seq1  ATTACACTGGGGTATTGAGCCTTCCCTGAACTAAAAGCCTTTCTTTCCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACACTGGGGTATTGAGCCTTCCCTGAACTAAAAGCCTTTCTTTCCAG  850

seq1  TGGTTCTAGATAAGACCAACCTCTGCTACATATGCCAGAGGTCTCTTCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTAGATAAGACCAACCTCTGCTACATATGCCAGAGGTCTCTTCAT  900

seq1  GTGTACTCTTT-GGTTGATGGTTTTGTCCATGGGATCTCTGGACTTCCGG  948
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTCTTTGGGTTGATGGTTTTGTCCATGGGATCTCTGGACTTCCGG  950

seq1  TTAGTTGATATTGTGTTCTTCCTATGGGGTTGCAACCCCCTTCATCTCCT  998
      |||||||||| |||||||||||||||||||||||  ||||||||||||| 
seq2  TTAGTTGATA-TGTGTTCTTCCTATGGGGTTGCA--CCCCTTCATCTCC-  996

seq1  TTAGTCCTTTCCCTATCTCCTGGGGTTCAATGTATGTGGATTATCATGTG  1048
      ||||||  |||||||||| |||||||   ||||||||||| |||||||||
seq2  TTAGTC--TTCCCTATCT-CTGGGGT--CATGTATGTGGA-TATCATGTG  1040

seq1  TTTACCATGTTATGTGTCTTAGAATGCTA-CACTATTATAT-TTTCATGT  1096
      ||||||||||   ||||| ||| |||||| ||||||| ||| ||||||| 
seq2  TTTACCATGTATGGTGTC-TAG-ATGCTACCACTATT-TATATTTCATG-  1086

seq1  TAGAAAATTAGATATTAAGCTTATTTTATTTATT  1130
      ||||||||||||  |||||||||||||| |||||
seq2  TAGAAAATTAGAATTTAAGCTTATTTTAATTATT  1120


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