BAC Information

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BAC

Clone NameB6Ng01-229P19
Chromosome3 (Build37)
Map Location 41,278,798 - 41,279,089
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040882, Intu, Slc25a31, Hspa4l, Plk4, Mfsd8, LOC100039027, LOC100039043, 3110057O12Rik, 1700034I23Rik, Larp2, Pgrmc2, EG666004
Downstream genePpia-ps3_337.1, LOC100039115, Phf17, Sclt1, D3Ertd751e, LOC666031
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-229P19.bB6Ng01-229P19.g
ACCGA042970GA042971
length1,066292
definitionB6Ng01-229P19.b B6Ng01-229P19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcagcagtcagtaggacacgtatataaacatccctacccaaccc
ctactcccaagctcagagaacatcacagaaaatgggacagaaagaatgta
tgaggaagtgtaccataaaagatagacttctggatatgacacagctgcta
caagaactcatagccactgtggttgcctttacaagacatacaggagatca
agccagttaaaaaaaatctagcatgggagaccatgccaagagagacccta
acagtgtggggaagaccagaaaccagaggccagatggcccagagagctat
gatagtaccaaacatgaccagaaaaaacaaacaaacaaacaaagacaata
tagacagtagcctagcataatagtcatcagtgaggcttcaaccagcaact
gatagaaacagatgcagagacctatagccaatccttaggtggagctctgg
gaatcctgctgaagaagggaggaaaggattttgagaaccagaggggtcaa
ggatatcacatgaaaaaccacagaatcaacaaacctgaacttgcaagggt
tcacagagactaaaacgacaatcaaaagcctgcattggccttacctaggc
tctcagtatatatgttacagttatgcggcttgttgtttttgttggattcc
taagagggagcagaagctgtttctgacacttttgtctgcttttggaaccc
ttgtcctcctaatggattgccttgtcctgcctttatataaagggaagtgc
ctaatcttactgcagctcaatataccacatttggttgatcctcctgggag
gcctgcccttttctgaagggaaatggaggtgtgacatttggtatccgcga
agagagattgacttttcttttaggggaggccattgggaaggtttgccaca
tcccaggaaatgatcctacacatatttccatataggaagcactaattgta
tttagtttgggggggtgggcagatgaattaggcatagatggaaaacctat
tcgagggagggaagaagagagctgagaaagcatgagggatccattatcgg
ccaggatacattgtat
atgcaggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
acgtacatggacagagggcagggggagaaagagaagattatagtttgttg
gcacgggcacacaactaactcacagaatatctgtgcaagaataaccaaga
aggaaatagcattagcattagacagctctttgaacttattaaaagatagt
gactctttcttaaggaaaaggtctttaagtaaacaatgcctctgacaaat
acacagtaggcatgccttctcatgttgctggtgcagcaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_41278798_41279089
seq2: B6Ng01-229P19.g_73_364

seq1  ATGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  50

seq1  ACGTACATGGACAGAGGGCAGGGGGAGAAAGAGAAGATTATAGTTTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACATGGACAGAGGGCAGGGGGAGAAAGAGAAGATTATAGTTTGTTG  100

seq1  GCACGGGCACACAACTAACTCACAGAATATCTGTGCAAGAATAACCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGGGCACACAACTAACTCACAGAATATCTGTGCAAGAATAACCAAGA  150

seq1  AGGAAATAGCATTAGCATTAGACAGCTCTTTGAACTTATTAAAAGATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATAGCATTAGCATTAGACAGCTCTTTGAACTTATTAAAAGATAGT  200

seq1  GACTCTTTCTTAAGGAAAAGGTCTTTAAGTAAACAATGCCTCTGACAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTTTCTTAAGGAAAAGGTCTTTAAGTAAACAATGCCTCTGACAAAT  250

seq1  ACACAGTAGGCATGCCTTCTCATGGTGCTGGTGCAGCAGGGA  292
      |||||||||||||||||||||||| |||||||||||||||||
seq2  ACACAGTAGGCATGCCTTCTCATGTTGCTGGTGCAGCAGGGA  292