BAC Information

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BAC

Clone NameB6Ng01-230G20
Chromosome3 (Build37)
Map Location 69,583,053 - 69,584,169
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC639530, 1110032F04Rik, Ift80, Smc4, Trim59, LOC667272, Kpna4, Arl14, Ppm1l, LOC667309, B3galnt1, Rpl32-ps, Nmd3
Downstream geneLOC100041334, 1110032A04Rik, Gm414, LOC100041384, LOC625868, LOC670542, EG625901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230G20.bB6Ng01-230G20.g
ACCGA043294GA043295
length1,1171,193
definitionB6Ng01-230G20.b B6Ng01-230G20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctgctgcctccctgtgctgggattagtataagattgccccat
catggttgggcctagctttgtatctaatctaaacccatgccattaggctt
gtgagtcaactgcttaattccctgaacctctattttgagactctgacccc
caccccataaatctttgcttttcttctgtattttctcccttctgtctgtt
caagcagatcgtagtttttgttgttgttttgctttctttctttcttccac
gaggtgatttgttgggagaagagtaaactgagctgtacatcttggtgacc
ttgagagcactggtaggtggggtatgagccagaaaccacatcaataacat
caataacatgttggccagaaacccaaagagaaaagaatcttttgcaatca
gagagattgcccagagccagaaggaggggacagagctccaaagtcgcaga
gcagagagaaaacactccctgaatctttcaacacccattgactccctttt
ctaccaggctctaagtgcagtgaacaaagagacaaaaatcctcatggaga
ctgtgtcttagtgccagcacttctatgaagaaagacatcattctaatgcc
acatgtatttcttcatagtaaccacttaaggtgcttcgtttctaattcat
ggctgaagaaagtaagtcctaaccgtgccataacactttctgatttcaca
gatagggggtaggagaacgagagtccacacccaagcagtctgattacctt
tctctaagtgctgtgatacgctctgctacatttctaggtagggttttggg
aagattgagatggacactggaggcaagtgtataggcatactcccacccac
atggactaggtgagcaatagacagatcctcaagttccagggacctctccc
tgagttgatgtgtggtcctggaagctatctagccctgaaaaacttccatt
gcctaagatcatgagaccacagactcaatgaaaagacaaagcctatgctt
gtgtcctctgagcatgagtctcaaaatagaaatttagtaatagaggaata
gcatcatgagccagagacacagggagaatggatggctagaaagtgagtct
tgctgcctcaaggctga
gaattccatgatcgtggacccactgtcgaacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgattgataag
gcattgtgtcagtccatggatggtggttttagctgaggcattatgtccag
gagaggcaaatccataaccagactaagtatctactccagtaagaacaaaa
cgctgtcctttcacagaggaagtggcccaatatagtcaacctgccaccag
gttgctggctggtcacctcgaggaatggtgcttgtatctgttggtttctg
ctgttagcagatctggcattcagcagctgctgtagccaggtgagtggaag
tccatgttgctgagcccaagcataacctccatctcgaccaccgtggccac
tttgttcatgtgcccattgagcaatgacagggatggctggggaatgaggc
tgactgtgcacagaacgggtcatcttatccaattgattattgctgaagtc
accttttggtgagcatttacatgggacacaaatatctttacatcctctgc
ccatttggagagatctatccacatacttcttccccagatgtctttctcac
caattttccaattgtgatctttccaagtccctgaccatccagccaatcca
ttggctacagcccatgagtcagtgaataattgtacatctggccattactg
cccaaagttctgcccactgtgaagatttcccttcacctgtgtctttcagg
gttgtcccagaaaaggggttgtagtgctgcagctgtccacttctaggtgg
tgcctgcataacgtgcagtgccatcagtaaaccaggccctagtcttctcc
tcttcagtcagccgatcatagggaatacccaatgaggctatatgagcatg
cttgggcagcagatggcattaaaaacagaagtagaaaccaaaggcatttg
agaaacttcttcatgtaacttgcttgttgcctttcaggacctgcttctgg
cccaatcacatatataccacttccatttgataatagactgctactgtgtg
catcccacttttatgacttgcaggtctgaatagtaccagctcatgatggg
gtatttcagttcaactaggtaacttgccggtcctatgttccaaggttcag
ttcctttacgtccatggcaggcaaggaagtcatctcaacaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_69583053_69584169
seq2: B6Ng01-230G20.b_47_1163

seq1  GAATTCACCTGCTGCCTCCCTGTGCTGGGATTAGTATAAGATTGCCCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGCTGCCTCCCTGTGCTGGGATTAGTATAAGATTGCCCCAT  50

seq1  CATGGTTGGGCCTAGCTTTGTATCTAATCTAAACCCATGCCATTAGGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTGGGCCTAGCTTTGTATCTAATCTAAACCCATGCCATTAGGCTT  100

seq1  GTGAGTCAACTGCTTAATTCCCTGAACCTCTATTTTGAGACTCTGACCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCAACTGCTTAATTCCCTGAACCTCTATTTTGAGACTCTGACCCC  150

seq1  CACCCCATAAATCTTTGCTTTTCTTCTGTATTTTCTCCCTTCTGTCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCATAAATCTTTGCTTTTCTTCTGTATTTTCTCCCTTCTGTCTGTT  200

seq1  CAAGCAGATCGTAGTTTTTGTTGTTGTTTTGCTTTCTTTCTTTCTTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGATCGTAGTTTTTGTTGTTGTTTTGCTTTCTTTCTTTCTTCCAC  250

seq1  GAGGTGATTTGTTGGGAGAAGAGTAAACTGAGCTGTACATCTTGGTGACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGATTTGTTGGGAGAAGAGTAAACTGAGCTGTACATCTTGGTGACC  300

seq1  TTGAGAGCACTGGTAGGTGGGGTATGAGCCAGAAACCACATCAATAACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGCACTGGTAGGTGGGGTATGAGCCAGAAACCACATCAATAACAT  350

seq1  CAATAACATGTTGGCCAGAAACCCAAAGAGAAAAGAATCTTTTGCAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACATGTTGGCCAGAAACCCAAAGAGAAAAGAATCTTTTGCAATCA  400

seq1  GAGAGATTGCCCAGAGCCAGAAGGAGGGGACAGAGCTCCAAAGTCGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGATTGCCCAGAGCCAGAAGGAGGGGACAGAGCTCCAAAGTCGCAGA  450

seq1  GCAGAGAGAAAACACTCCCTGAATCTTTCAACACCCATTGACTCCCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAGAAAACACTCCCTGAATCTTTCAACACCCATTGACTCCCTTTT  500

seq1  CTACCAGGCTCTAAGTGCAGTGAACAAAGAGACAAAAATCCTCATGGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCAGGCTCTAAGTGCAGTGAACAAAGAGACAAAAATCCTCATGGAGA  550

seq1  CTGTGTCTTAGTGCCAGCACTTCTATGAAGAAAGACATCATTCTAATGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTTAGTGCCAGCACTTCTATGAAGAAAGACATCATTCTAATGCC  600

seq1  ACATGTATTTCTTCATAGTAACCACTTAAGGTGCTTCGTTTCTAATTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTATTTCTTCATAGTAACCACTTAAGGTGCTTCGTTTCTAATTCAT  650

seq1  GGCTGAAGAAAGTAAGTCCTAACCGTGCCATAACACTTTCTGATTTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAGAAAGTAAGTCCTAACCGTGCCATAACACTTTCTGATTTCACA  700

seq1  GATAGGGGGTAGGAGAACGAGAGTCCACACCCAAGCAGTCTGATTACCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGGGGGTAGGAGAACGAGAGTCCACACCCAAGCAGTCTGATTACCTT  750

seq1  TCTCTAAGTGCTGTGATACGCTCTGCTACATTTCTAGGTAGGGTTTTGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAAGTGCTGTGATACGCTCTGCTACATTTCTAGGTAGGGTTTTGGG  800

seq1  AAGATTGAGATGGACACTGGAGGCAAGTGTATAGGCATACTCCCACCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTGAGATGGACACTGGAGGCAAGTGTATAGGCATACTCCCACCCAC  850

seq1  ATGGACTAGGTGAGCAATAGACAGATCCTCAAGTTCCAGGGACCTCTCCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTAGGTGAGCAATAGACAGATCCTCAAGTTCCAGGGACCTCTCCC  900

seq1  TGAGTTGATGTGTGGTCCTGGAAGCTATCTAGCCCTG-AAAACTTCCATT  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGAGTTGATGTGTGGTCCTGGAAGCTATCTAGCCCTGAAAAACTTCCATT  950

seq1  GCCTAAGATCATGAGACCACAGACTCAATGAAAGGACAAAGCCTATGCTT  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GCCTAAGATCATGAGACCACAGACTCAATGAAAAGACAAAGCCTATGCTT  1000

seq1  GTGT-CTCTGAAGCATGGAGTCTCAAAATAGAAATTAAGTTAAATTAGAG  1048
      |||| ||||| ||||| ||||||||||||||||||| |||   | |||||
seq2  GTGTCCTCTG-AGCAT-GAGTCTCAAAATAGAAATTTAGT---AATAGAG  1045

seq1  GAATAGGAATCATGAGGCAGGGAGACAGGGAGA--TGATGGCTTAGAAGT  1096
      ||||| | |||||||| ||| || |||||||||   |||||||   ||||
seq2  GAATA-GCATCATGAGCCAGAGACACAGGGAGAATGGATGGCTAGAAAGT  1094

seq1  GAGTC-TGCTG-CTCAAGCCTGA  1117
      ||||| ||||| |||||| ||||
seq2  GAGTCTTGCTGCCTCAAGGCTGA  1117