BAC Information

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BAC

Clone NameB6Ng01-230G23
Chromosome3 (Build37)
Map Location 35,731,686 - 35,732,512
singlet/doubletsinglet
Overlap geneAtp11b
Upstream geneLOC665655, Ube2l3-ps1, LOC625963
Downstream geneLOC665667, Dcun1d1, Mccc1, BC050811, Acad9, D3Ertd254e, Gpr103, Anxa5, 1810062G17Rik, LOC665709, Exosc9, Ccna2, Bbs7, Trpc3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230G23.bB6Ng01-230G23.g
ACCGA043300GA043301
length1,199827
definitionB6Ng01-230G23.b B6Ng01-230G23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtgtggatataaatttttatttcatttgtataaacacaaagga
ttataattgttagcttatagtacaaatatatttatttggaaagaagctgc
tatctcccaaaatgtactgtttttacgttcccattaataatgtgcagtcc
ctgctccacatctcctgcagtatttggcattgtctgctcagcttttgtca
ctatgacacaaactagagttactttaaaaaggggaacctcaactgaggaa
ttgcctccatccagttggccaaagggaatgtctgtggggtattctcttga
ttaatgattggtgtagaagggcccagcccacagtgggtggtgccatccca
gaacaagcaagcaagccatgagagagggagccgggaaggagggctgtttg
gtttcctgcctctgagttcctgccctggcttccctcagtgatgggctaga
aagtgtgagatgaattaaaccctttcctcaagttgtttttgagcaaacta
ggacatcactactttgaacttttaaccatttgttactctattgtttcatt
cattcattcattcattcattcattcatcttggatgctgggcacagactgc
agagtcttgaacattctaggcaggtgctataccagtgaactgcatctcag
ccctcactgttttaatatttacttccctgatgagctatatacaaagattt
atatctttatttgccacctgggtgactcctttgataaagtgtcagtcttt
catctagtttttagtattttttttttaactttttgtcttttttttaatgt
ttcttttataaatactcagttggcaggttgcccttttccctttctgcatg
tcttgtggggagtggatgtttccagttttgtttaagacttgcctgtcagt
tcttccatgcactgtgcctttggggtgtgcaaataccattgctagacaca
ggtcatctagatattgttttgggtttatatgcttatgaagaatatataaa
atcctgtatcaagaattccttgttttctctgaaatgtttctgttcagtat
cattatccagcagcctattttgtgaaatatcattaatctgattctaaagt
tttatattagacgcaaggctctaattagcccaactcacataataggaggg
ccatgtggccactgatattgctctcgagccactcttggcctcatatatg
gaattctgtgttctcactttacgtgagtgtgtccttagggaaaatgcatc
ttaaagtaggtgtcagctaagacattctttctaggcatttgtaaccattt
aagatctctgtctctgtggtcatcactgtttgaatcccttcccatcttct
tttccagaatgtgtgctttatcacaccccagtttttatatcagttctact
gtttgttttctcaacaagtaagtaaaacaggcttgtgtttgtccattcag
aaagttaatgtgttcaagtcttaacaagtatttaaacagacttcattttc
ctttgtcctgcaagtaactaggtatagttacttaatccacctagcattca
taatatttattctggctttaatttgtgattactattaataccaaaatata
tgttaattgtggacttttcaaattgacattaaatcattaactcttgattt
gtgtgttcatgaaggttttacggagtttgtgctttcctcctatggtgcag
tcaggggtgcagccagggtgatttcctcctatggtgcagtcaggatgatt
ttgaactggtcctcttgcctctactccccaagtggcttatggggttaaat
ttccactggtggcaaagatgtgacgcgtaggcactgtttcttggcttgtt
cactcatggtttgctctgcctgcttccttataaaacccagaaacacctgc
ccagggatggcacgatacacagtggcctgcatcattaatcaggcattatc
catagactgactactggccaagagtatggaggcattttctataataaggt
tcccttttctctggggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_35731686_35732512
seq2: B6Ng01-230G23.g_73_899

seq1  GAATTCTGTGTTCTCACTTTACGTGAGTGTGTCCTTAGGGAAAATGCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTTCTCACTTTACGTGAGTGTGTCCTTAGGGAAAATGCATC  50

seq1  TTAAAGTAGGTGTCAGCTAAGACATTCTTTCTAGGCATTTGTAACCATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAGGTGTCAGCTAAGACATTCTTTCTAGGCATTTGTAACCATTT  100

seq1  AAGATCTCTGTCTCTGTGGTCATCACTGTTTGAATCCCTTCCCATCTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCTCTGTCTCTGTGGTCATCACTGTTTGAATCCCTTCCCATCTTCT  150

seq1  TTTCCAGAATGTGTGCTTTATCACACCCCAGTTTTTATATCAGTTCTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGAATGTGTGCTTTATCACACCCCAGTTTTTATATCAGTTCTACT  200

seq1  GTTTGTTTTCTCAACAAGTAAGTAAAACAGGCTTGTGTTTGTCCATTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTTCTCAACAAGTAAGTAAAACAGGCTTGTGTTTGTCCATTCAG  250

seq1  AAAGTTAATGTGTTCAAGTCTTAACAAGTATTTAAACAGACTTCATTTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTAATGTGTTCAAGTCTTAACAAGTATTTAAACAGACTTCATTTTC  300

seq1  CTTTGTCCTGCAAGTAACTAGGTATAGTTACTTAATCCACCTAGCATTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTCCTGCAAGTAACTAGGTATAGTTACTTAATCCACCTAGCATTCA  350

seq1  TAATATTTATTCTGGCTTTAATTTGTGATTACTATTAATACCAAAATATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTATTCTGGCTTTAATTTGTGATTACTATTAATACCAAAATATA  400

seq1  TGTTAATTGTGGACTTTTCAAATTGACATTAAATCATTAACTCTTGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAATTGTGGACTTTTCAAATTGACATTAAATCATTAACTCTTGATTT  450

seq1  GTGTGTTCATGAAGGTTTTACGGAGTTTGTGCTTTCCTCCTATGGTGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCATGAAGGTTTTACGGAGTTTGTGCTTTCCTCCTATGGTGCAG  500

seq1  TCAGGGGTGCAGCCAGGGTGATTTCCTCCTATGGTGCAGTCAGGATGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGTGCAGCCAGGGTGATTTCCTCCTATGGTGCAGTCAGGATGATT  550

seq1  TTGAACTGGTCCTCTTGCCTCTACTCCCCAAGTGGCTTATGGGGTTAAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTGGTCCTCTTGCCTCTACTCCCCAAGTGGCTTATGGGGTTAAAT  600

seq1  TTCCACTGGTGGCAAAGATGTGACGCGTAGGCACTGTTTCTTGGCTTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGGTGGCAAAGATGTGACGCGTAGGCACTGTTTCTTGGCTTGTT  650

seq1  CACTCATGGTTTGCTCTGCCTGCTTCCTTATAAAACCCAGAAACACCTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCATGGTTTGCTCTGCCTGCTTCCTTATAAAACCCAGAAACACCTGC  700

seq1  CCAGGGATGGCACGATACACAGTGGCCTGCATCATTAATCAGGCATTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATGGCACGATACACAGTGGCCTGCATCATTAATCAGGCATTATC  750

seq1  CATAGACTGACTACTGGCCAAGAGTATGGAGGCATTTTCTATAATAAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACTGACTACTGGCCAAGAGTATGGAGGCATTTTCTATAATAAGGT  800

seq1  TCCCTTTTCTCTGGGGGGGGGGGGGGG  827
      |||||||||||||||||||||||||||
seq2  TCCCTTTTCTCTGGGGGGGGGGGGGGG  827