BAC Information

Click to search

BAC

Clone NameB6Ng01-231L15
Chromosome3 (Build37)
Map Location 119,948,388 - 120,121,945
singlet/doubletdoublet
Overlap genenone
Upstream geneDpyd, LOC100043275, LOC100043278, Ptbp2
Downstream gene2510027J23Rik, LOC435752, Tmem56, LOC668778, LOC668780, Alg14, Ppia-ps3_1234.1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231L15.bB6Ng01-231L15.g
ACCGA044244GA044245
length985864
definitionB6Ng01-231L15.b B6Ng01-231L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,948,388 - 119,949,368)(120,121,096 - 120,121,945)
sequence
gaattctcatcctggagctgtcccttctgtcaaccttacccagagcagtg
taaacctttctctgacttcttagatatctcattactttgtctttttttca
gtacttgattctgacaaaaatgtacaataagcatgtaaatcataaagact
acaaggacaataagttcagatttacctgtggtagcacagctgctaatatt
tcactgtgtcatctttcagaattttgttcacactcacaagcagtatgcaa
ctcaaatatgtcagctcaaacaaatgtacatcaagcaatggaaactgata
caatagcgcaaccatccctatttgaaaaatattctaaatactttcatatt
aattaagtttgcttcaggccatagtcattaattattgcatagaattttag
tgtacagataagtcaccacttattgaatcaacctgttgtctccagtcatt
taagttttatttgcttttttcatattgaaatgtagtgacatgttgcacgt
aaatgtgtaatgcatccgttatcacttccttgtcatagcattgcagacta
aatggttctaaatctttcaaaggttttgaagcaggttattaagttacaat
tcagtcgagcatgaaggactttattttttccagaatatattccaacatta
aaagccacacttgtttatgcaaagaaataaatacatacagaacaaagcaa
aggcactctgaaattgtagcataaaaccttatgtcatcattatttatgtc
ttcattactactaaaggtgaacatgcaagacaggagttcccatttgtgta
atgcaatacctatttgaaaatctggtgttttattaagttctgagcattgt
actttaaacaggtaaggatagcaagatgttatttttttttaatatgtgaa
ttcttacctggaatcacaaaatggcactggtggtatagcccagtgtactt
cataccctggaggtcacgcgtcccagtacttgcaa
gaattctcttgcctctctgccccaaggatgccttggttgtcaggcttggt
gttttagccaccgagaaagtctcctagccccactaacatgtttctatcta
aatttagtatttgggcttctcagcctaaatttatgcttgatcctagctgc
cttgggtctgcttgtgtttacatcggtttgcattttccccaaagaaaccg
gagatcaccagttattacatggggaacaagtagaacccaacatgacattt
gactcagttccaaacccttaaagatttgctcattagcactggaatgaata
aaaaaataaaataaaataaaataaaataaaataaaataaactattgatac
ctatgaccaaaaaatgtctcctgacattggcagatatttctttttttttt
cctaatttttttattaggtattttcttcatttacatttccaatgctatcc
catggctgggggagagtatggagcagatatttcttgagaagaggactgat
ccacgcagcttccattcctaagtaacactgaagaggagtacaggagtggc
tccaagggccttactttatatcatgaatatgatagctcaatacaggcaac
actagttttccaagaataaacagtatttctttctttttttttttttgtct
ttttctaatctcatgtcctttaaacttttttcagttcatcatggccatga
gatgaattagaattgtttgccaccctcatagattgttttaataaaatgtg
tgtttttcaggggtatacaattttatagcaatttcccaaagtggaaacag
ggcacaaacaccctgtatgggggctttccagaactgaagacatctgtgat
agtaagagtatggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_119948388_119949368
seq2: B6Ng01-231L15.b_43_1027

seq1  GAATTCTCATCCTGGAGCTGTCCCTTCTGTCAACCTTACCCAGAGCAGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATCCTGGAGCTGTCCCTTCTGTCAACCTTACCCAGAGCAGTG  50

seq1  TAAACCTTTCTCTGACTTCTTAGATATCTCATTACTTTGTCTTTTTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTTTCTCTGACTTCTTAGATATCTCATTACTTTGTCTTTTTTTCA  100

seq1  GTACTTGATTCTGACAAAAATGTACAATAAGCATGTAAATCATAAAGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTGATTCTGACAAAAATGTACAATAAGCATGTAAATCATAAAGACT  150

seq1  ACAAGGACAATAAGTTCAGATTTACCTGTGGTAGCACAGCTGCTAATATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGACAATAAGTTCAGATTTACCTGTGGTAGCACAGCTGCTAATATT  200

seq1  TCACTGTGTCATCTTTCAGAATTTTGTTCACACTCACAAGCAGTATGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGTGTCATCTTTCAGAATTTTGTTCACACTCACAAGCAGTATGCAA  250

seq1  CTCAAATATGTCAGCTCAAACAAATGTACATCAAGCAATGGAAACTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATATGTCAGCTCAAACAAATGTACATCAAGCAATGGAAACTGATA  300

seq1  CAATAGCGCAACCATCCCTATTTGAAAAATATTCTAAATACTTTCATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCGCAACCATCCCTATTTGAAAAATATTCTAAATACTTTCATATT  350

seq1  AATTAAGTTTGCTTCAGGCCATAGTCATTAATTATTGCATAGAATTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTTTGCTTCAGGCCATAGTCATTAATTATTGCATAGAATTTTAG  400

seq1  TGTACAGATAAGTCACCACTTATTGAATCAACCTGTTGTCTCCAGTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGATAAGTCACCACTTATTGAATCAACCTGTTGTCTCCAGTCATT  450

seq1  TAAGTTTTATTTGCTTTTTTCATATTGAAATGTAGTGACATGTTGCACGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTTTATTTGCTTTTTTCATATTGAAATGTAGTGACATGTTGCACGT  500

seq1  AAATGTGTAATGCATCCGTTATCACTTCCTTGTCATAGCATTGCAGACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTAATGCATCCGTTATCACTTCCTTGTCATAGCATTGCAGACTA  550

seq1  AATGGTTCTAAATCTTTCAAAGGTTTTGAAGCAGGTTATTAAGTTACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTCTAAATCTTTCAAAGGTTTTGAAGCAGGTTATTAAGTTACAAT  600

seq1  TCAGTCGAGCATGAAGGACTTTATTTTTTCCAGAATATATTCCAACATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCGAGCATGAAGGACTTTATTTTTTCCAGAATATATTCCAACATTA  650

seq1  AAAGCCACACTTGTTTATGCAAAGAAATAAATACATACAGAACAAAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCACACTTGTTTATGCAAAGAAATAAATACATACAGAACAAAGCAA  700

seq1  AGGCACTCTGAAATTGTAGCATAAAACCTTATGTCATCATTATTTATGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTCTGAAATTGTAGCATAAAACCTTATGTCATCATTATTTATGTC  750

seq1  TTCATTACTACTAAAGGTGAACATGCAAGACAGGAGTTCCAATTTGTGTA  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TTCATTACTACTAAAGGTGAACATGCAAGACAGGAGTTCCCATTTGTGTA  800

seq1  ATGCAAATACCTATTTGAAAATCT-GTGTTTTATTAAGTTCTGAGCATTG  849
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGC-AATACCTATTTGAAAATCTGGTGTTTTATTAAGTTCTGAGCATTG  849

seq1  TACTTTAAACA-GTAAGGATAGCAAGATGTTATTTTTTTTTAATATGTGA  898
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAACAGGTAAGGATAGCAAGATGTTATTTTTTTTTAATATGTGA  899

seq1  ATTCTTACTTGGAATCACAAAAATGGCACTGGTGGTATAGCCCAGTGTAC  948
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  ATTCTTACCTGGAATCAC-AAAATGGCACTGGTGGTATAGCCCAGTGTAC  948

seq1  TTCATACCCT-GAGTTCA-ACG-CCCAGTAC-TGCAA  981
      |||||||||| ||| |||  || |||||||| |||||
seq2  TTCATACCCTGGAGGTCACGCGTCCCAGTACTTGCAA  985

seq1: chr3_120121096_120121945
seq2: B6Ng01-231L15.g_73_936 (reverse)

seq1  ACCATACTC-TACTATCACAGATGTCTTCAG-TCTGGAA--GCCCCATAC  46
      ||||||||| ||||||||||||||||||||| |||||||   ||||||||
seq2  ACCATACTCTTACTATCACAGATGTCTTCAGTTCTGGAAAGCCCCCATAC  50

seq1  AGGGTGTTTGTG-CCTGTTTCCACTTTGGG-AATTGCTAT-AAATTGT-T  92
      |||||||||||| ||||||||||||||||| ||||||||| ||||||| |
seq2  AGGGTGTTTGTGCCCTGTTTCCACTTTGGGAAATTGCTATAAAATTGTAT  100

seq1  ACCCCTG-AAAACACACATTTTATT-AAACAATCTATGA-GGTGGC-AAC  138
      ||||||| ||||||||||||||||| ||||||||||||| |||||| |||
seq2  ACCCCTGAAAAACACACATTTTATTAAAACAATCTATGAGGGTGGCAAAC  150

seq1  AATTCTAATTCATCTCATGGCCATGATGAACTG-AAAAAGTTTAAAGGAC  187
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATTCTAATTCATCTCATGGCCATGATGAACTGAAAAAAGTTTAAAGGAC  200

seq1  ATGAGATTAG-AAAAGACAAAAAAAAAAAAAGAAAGAAATACTGTTTATT  236
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATGAGATTAGAAAAAGACAAAAAAAAAAAAAGAAAGAAATACTGTTTATT  250

seq1  CTTGGAAAACTAGTGTTGCCTGTATTGAGCTATCATATTCATGATATAAA  286
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAAACTAGTGTTGCCTGTATTGAGCTATCATATTCATGATATAAA  300

seq1  GTAAGGCCCTTGGAGCCACTCCTGTACTCCTCTTCAGTGTTACTTAGGAA  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGCCCTTGGAGCCACTCCTGTACTCCTCTTCAGTGTTACTTAGGAA  350

seq1  TGGAAGCTGCGTGGATCAGTCCTCTTCTCAAGAAATATCTGCTCCATACT  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGCTGCGTGGATCAGTCCTCTTCTCAAGAAATATCTGCTCCATACT  400

seq1  CTCCCCCAGCCATGGGATAGCATTGGAAATGTAAATGAAGAAAATACCTA  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCAGCCATGGGATAGCATTGGAAATGTAAATGAAGAAAATACCTA  450

seq1  ATAAAAAAATTAGGAAAAAAAAAAGAAATATCTGCCAATGTCAGGAGACA  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAATTAGGAAAAAAAAAAGAAATATCTGCCAATGTCAGGAGACA  500

seq1  TTTTTTGGTCATAGGTATCAATAGTTTATTTTATTTTATTTTATTTTATT  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGGTCATAGGTATCAATAGTTTATTTTATTTTATTTTATTTTATT  550

seq1  TTATTTTATTTTTTTATTCATTCCAGTGCTAATGAGCAAATCTTTAAGGG  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTTTTTTATTCATTCCAGTGCTAATGAGCAAATCTTTAAGGG  600

seq1  TTTGGAACTGAGTCAAATGTCATGTTGGGTTCTACTTGTTCCCCATGTAA  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAACTGAGTCAAATGTCATGTTGGGTTCTACTTGTTCCCCATGTAA  650

seq1  TAACTGGTGATCTCCGGTTTCTTTGGGGAAAATGCAAACCGATGTAAACA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGTGATCTCCGGTTTCTTTGGGGAAAATGCAAACCGATGTAAACA  700

seq1  CAAGCAGACCCAAGGCAGCTAGGATCAAGCATAAATTTAGGCTGAGAAGC  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGACCCAAGGCAGCTAGGATCAAGCATAAATTTAGGCTGAGAAGC  750

seq1  CCAAATACTAAATTTAGATAGAAACATGTTAGTGGGGCTAGGAGACTTTC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATACTAAATTTAGATAGAAACATGTTAGTGGGGCTAGGAGACTTTC  800

seq1  TCGGTGGCTAAAACACCAAGCCTGACAACCAAGGCATCCTTGGGGCAGAG  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTGGCTAAAACACCAAGCCTGACAACCAAGGCATCCTTGGGGCAGAG  850

seq1  AGGCAAGAGAATTC  850
      ||||||||||||||
seq2  AGGCAAGAGAATTC  864