BAC Information

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BAC

Clone NameB6Ng01-231O12
Chromosome3 (Build37)
Map Location 84,431,735 - 84,526,054
singlet/doubletdoublet
Overlap geneTmem154
Upstream geneLOC100042091, Sfrp2, LOC633522, Tlr2, D930015E06Rik, Mnd1, Trim2, EG624713, 6330505N24Rik, Arfip1, EG667788, EG627369, Tigd4
Downstream geneLOC624889, Fbxw7, Dear1, LOC100042237, LOC100042125, Pet112l, 9930021J17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231O12.bB6Ng01-231O12.g
ACCGA044377GA044378
length1,0761,127
definitionB6Ng01-231O12.b B6Ng01-231O12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,431,735 - 84,432,810)(84,524,927 - 84,526,054)
sequence
gaattcaaggtcagcctggtctacagagtgagttccaggacagccagggc
tatacagagaaaccctgtctcaaaaaaccaaaaaccaaaaaccaaaaacc
aaaacaaacaaacaaaaaaatgatttatttattttatgtttatgagtaca
ctatagctgccttcagacacaccagaaagggtcccaggtcccattagaga
tggctgtgagccaccatgtggtttctgggaattgaactctggacttgtgg
aagagcagtcagtgctcttaaccactgagccatttctccagacctcggca
aatattcattcttataattgatttattttggtatttgatttttggttgtt
cttaatatccttgtcttttcaagatatagacagagatgtctgcaaatgag
gtgacagagtgtttgtttagaaagcagtcttggcatggggctggctcagg
agggcttattaagtgtttttttttttttatttttaatctacttttgcata
tgttcaaaatccttcataatataaagtttataaagccatcagttaaaata
gtattggattataacctaagggatagaataaatatccaccagccaacagt
gagatgaataaatgagaaaggaggagacaaatctcccatgcatcatgcta
catcactaacatctgcatggcccttgcggagaaagagcaggaacctccac
atgctatgggcaggctgcacacggtgacttccttccagggaaaggatgag
cgcacctgagccaggcaatcagggagagaaggtcaatggcgagctgtatt
gacagcatgcgcccttggtacatcccgaaagcatgccagctctgggctaa
ccttggagagaagatcagacaaactgaaatttgaagcacagtctataaaa
tgcccgacaagccttttgaaagctgtcagaatcatcaaaaaatatgaact
ttctgagaaactcaaagcgaaccagagtctcagaaacaaaaacaaataaa
atgccatgtattccagacggggtcttgaaacagaaaattgtctggtacta
aaacttataaaggtgatcatgtataa
gaattcttaacagcttacttgccactgaccctgtgtgatagctgtagcta
tcaacctgacagaaacctagcgtcatgaagaacggaccagacagaatggc
ctttgggcttgtctgtgagacattttcttaattgctaattgacataggag
ggtccagcccattatggaaagtactgcccctaggaagttaggtctgggct
ccctaagatggccgctgagtgagccagaacgtaagcaacaatctgtgtgg
ttcttgtctcaagctcctgtcttgaattcctgccttggctgtaatataag
atgaaacaaaccccctagccttggtttctgttacaggatttgtcacagca
acagaaaggacacctaggacacccatctcgcccgatcatagctgctggtc
cacaggcctggacttgagaagacctgtgtcccaacaccaggctgctggaa
gatatcatcctgggcaatttcacatcacaggccactcccaggccagctct
ttcttctctcttagaggcagagcctccaaagtatctctaaaaatagaagc
tgctttcctggaccgatggaattaaaatgatttaagatttctcttggttg
acaggtcctgaagtgtctattagcatatgcaaatgttataaaataatggg
ttactttgattgtatttaccctccctcaccatctcttaccagtaactctt
cctgctcctccaatcaattcaatcctttctggtctcctctatgatcaggt
ctccccctgcccctccagaatctgatgtgggagaaaacatgtaatattta
tctatctaaggctggcttcttttgtttcaccatgatgatctccagttcca
tccattctcctgcaaacacccgattgttattcttttaaggctaaataata
aataccccattgcatacaatatgccaggttttatttgcctactcatcagt
tgagtggcaactagactaatttcatgacttggcagttatgaacagtgcca
caataaacatggcacacaggcccttctatagtatactggattttgactct
ttcgggtgtgcacacagcagtgccagttatgatgtatcacagctctgtca
cagtttctttaagtactgcccacagtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_84431735_84432810
seq2: B6Ng01-231O12.b_44_1119

seq1  GAATTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGTCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGC  50

seq1  TATACAGAGAAACCCTGTCTCAAAAAACCAAAAACCAAAAACCAAAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAGAGAAACCCTGTCTCAAAAAACCAAAAACCAAAAACCAAAAACC  100

seq1  AAAACAAACAAACAAAAAAATGATTTATTTATTTTATGTTTATGAGTACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAACAAACAAAAAAATGATTTATTTATTTTATGTTTATGAGTACA  150

seq1  CTATAGCTGCCTTCAGACACACCAGAAAGGGTCCCAGGTCCCATTAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGCTGCCTTCAGACACACCAGAAAGGGTCCCAGGTCCCATTAGAGA  200

seq1  TGGCTGTGAGCCACCATGTGGTTTCTGGGAATTGAACTCTGGACTTGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGAGCCACCATGTGGTTTCTGGGAATTGAACTCTGGACTTGTGG  250

seq1  AAGAGCAGTCAGTGCTCTTAACCACTGAGCCATTTCTCCAGACCTCGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGTCAGTGCTCTTAACCACTGAGCCATTTCTCCAGACCTCGGCA  300

seq1  AATATTCATTCTTATAATTGATTTATTTTGGTATTTGATTTTTGGTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCATTCTTATAATTGATTTATTTTGGTATTTGATTTTTGGTTGTT  350

seq1  CTTAATATCCTTGTCTTTTCAAGATATAGACAGAGATGTCTGCAAATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATATCCTTGTCTTTTCAAGATATAGACAGAGATGTCTGCAAATGAG  400

seq1  GTGACAGAGTGTTTGTTTAGAAAGCAGTCTTGGCATGGGGCTGGCTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGAGTGTTTGTTTAGAAAGCAGTCTTGGCATGGGGCTGGCTCAGG  450

seq1  AGGGCTTATTAAGTGTTTTTTTTTTTTTATTTTTAATCTACTTTTGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTTATTAAGTGTTTTTTTTTTTTTATTTTTAATCTACTTTTGCATA  500

seq1  TGTTCAAAATCCTTCATAATATAAAGTTTATAAAGCCATCAGTTAAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAAAATCCTTCATAATATAAAGTTTATAAAGCCATCAGTTAAAATA  550

seq1  GTATTGGATTATAACCTAAGGGATAGAATAAATATCCACCAGCCAACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGATTATAACCTAAGGGATAGAATAAATATCCACCAGCCAACAGT  600

seq1  GAGATGAATAAATGAGAAAGGAGGAGACAAATCTCCCATGCATCATGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGAATAAATGAGAAAGGAGGAGACAAATCTCCCATGCATCATGCTA  650

seq1  CATCACTAACATCTGCATGGCCCTTGCGGAGAAAGAGCAGGAACCTCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTAACATCTGCATGGCCCTTGCGGAGAAAGAGCAGGAACCTCCAC  700

seq1  ATGCTATGGGCAGGCTGCACACGGTGACTTCCTTCCAGGGAAAGGATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATGGGCAGGCTGCACACGGTGACTTCCTTCCAGGGAAAGGATGAG  750

seq1  CGCACCTGAGCCAGGCAATCAGGGAGAGAAGGTCAATGGCGAGCTGTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACCTGAGCCAGGCAATCAGGGAGAGAAGGTCAATGGCGAGCTGTATT  800

seq1  GACAGCATGCGCCCTTGGTACATCCCGAAAGCATGCCAGCTCT-GGCTAA  849
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GACAGCATGCGCCCTTGGTACATCCCGAAAGCATGCCAGCTCTGGGCTAA  850

seq1  CCTTGGAGAGAAGATCAGACAAACTGAAA-TTGAAGCACAGTCTATAAAA  898
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCTTGGAGAGAAGATCAGACAAACTGAAATTTGAAGCACAGTCTATAAAA  900

seq1  TGCCCGACCAAGCCTTTTGAAAGCTGTCAGAATCATC-AAAAATATGAAC  947
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  TGCCCGA-CAAGCCTTTTGAAAGCTGTCAGAATCATCAAAAAATATGAAC  949

seq1  TTTCTGAGAAACTCAAAGCGAACCAGAGTCTCAGGAAACAAAAACAAAT-  996
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  TTTCTGAGAAACTCAAAGCGAACCAGAGTCTCA-GAAACAAAAACAAATA  998

seq1  AAATGCCATGTATCCCAGACGGGGTCTTGAAACAGAAAA-TGTCTGGTAC  1045
      ||||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  AAATGCCATGTATTCCAGACGGGGTCTTGAAACAGAAAATTGTCTGGTAC  1048

seq1  CTAAAAACTTATAAAAGGTGATCATGTATAA  1076
         ||||||||| ||||||||||||||||||
seq2  --TAAAACTTAT-AAAGGTGATCATGTATAA  1076

seq1: chr3_84524927_84526054
seq2: B6Ng01-231O12.g_67_1193 (reverse)

seq1  AACTGGTGGGCAGGTACCTAAAGAAACCTGTGAACAGAGCTGTGATACAT  50
      |||| ||||||| |||| |||||||| ||||| |||||||||||||||||
seq2  AACT-GTGGGCA-GTACTTAAAGAAA-CTGTG-ACAGAGCTGTGATACAT  46

seq1  CATTACT-GCACTGCTGTGTGCACACCCAAAAGAGTCAAAA-CCAGTATA  98
      ||| ||| |||||||||||||||||||| |||||||||||| ||||||||
seq2  CATAACTGGCACTGCTGTGTGCACACCCGAAAGAGTCAAAATCCAGTATA  96

seq1  CTATAGAGGGGCCTGTGTGCCCATGTTTATTGTGGCACTGTTCATAACTG  148
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  CTATAGAAGGGCCTGTGTG-CCATGTTTATTGTGGCACTGTTCATAACTG  145

seq1  CCAAGTCATGAAATTAGTCTAGTTGCCACTCAACTGATGAGTAGGCAAAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTCATGAAATTAGTCTAGTTGCCACTCAACTGATGAGTAGGCAAAT  195

seq1  AAAACCTGGCATATTGTATGCAATGGGGTATTTATTATTTAGCCTT-AAA  247
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAACCTGGCATATTGTATGCAATGGGGTATTTATTATTTAGCCTTAAAA  245

seq1  GAATAACAATCGGGTGTTTGCAGGAGAATGGATGGAACTGGAGATCATCA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACAATCGGGTGTTTGCAGGAGAATGGATGGAACTGGAGATCATCA  295

seq1  TGGTG-AACAAAAGAAGCCAGCCTTAGATAGATAAATATTACATGTTTTC  346
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAAACAAAAGAAGCCAGCCTTAGATAGATAAATATTACATGTTTTC  345

seq1  TCCCACATCAGATTCTGGAGGGGCAGGGGGAGACCTGATCATAGAGGAGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACATCAGATTCTGGAGGGGCAGGGGGAGACCTGATCATAGAGGAGA  395

seq1  CCAGAAAGGATTGAATTGATTGGAGGAGCAGGAAGAGTTACTGGTAAGAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAAGGATTGAATTGATTGGAGGAGCAGGAAGAGTTACTGGTAAGAG  445

seq1  ATGGTGAGGGAGGGTAAATACAATCAAAGTAACCCATTATTTTATAACAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGAGGGAGGGTAAATACAATCAAAGTAACCCATTATTTTATAACAT  495

seq1  TTGCATATGCTAATAGACACTTCAGGACCTGTCAACCAAGAGAAATCTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATATGCTAATAGACACTTCAGGACCTGTCAACCAAGAGAAATCTTA  545

seq1  AATCATTTTAATTCCATCGGTCCAGGAAAGCAGCTTCTATTTTTAGAGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATTTTAATTCCATCGGTCCAGGAAAGCAGCTTCTATTTTTAGAGAT  595

seq1  ACTTTGGAGGCTCTGCCTCTAAGAGAGAAGAAAGAGCTGGCCTGGGAGTG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGAGGCTCTGCCTCTAAGAGAGAAGAAAGAGCTGGCCTGGGAGTG  645

seq1  GCCTGTGATGTGAAATTGCCCAGGATGATATCTTCCAGCAGCCTGGTGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGATGTGAAATTGCCCAGGATGATATCTTCCAGCAGCCTGGTGTT  695

seq1  GGGACACAGGTCTTCTCAAGTCCAGGCCTGTGGACCAGCAGCTATGATCG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACAGGTCTTCTCAAGTCCAGGCCTGTGGACCAGCAGCTATGATCG  745

seq1  GGCGAGATGGGTGTCCTAGGTGTCCTTTCTGTTGCTGTGACAAATCCTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGAGATGGGTGTCCTAGGTGTCCTTTCTGTTGCTGTGACAAATCCTGT  795

seq1  AACAGAAACCAAGGCTAGGGGGTTTGTTTCATCTTATATTACAGCCAAGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAACCAAGGCTAGGGGGTTTGTTTCATCTTATATTACAGCCAAGG  845

seq1  CAGGAATTCAAGACAGGAGCTTGAGACAAGAACCACACAGATTGTTGCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATTCAAGACAGGAGCTTGAGACAAGAACCACACAGATTGTTGCTT  895

seq1  ACGTTCTGGCTCACTCAGCGGCCATCTTAGGGAGCCCAGACCTAACTTCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTCTGGCTCACTCAGCGGCCATCTTAGGGAGCCCAGACCTAACTTCC  945

seq1  TAGGGGCAGTACTTTCCATAATGGGCTGGACCCTCCTATGTCAATTAGCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGCAGTACTTTCCATAATGGGCTGGACCCTCCTATGTCAATTAGCA  995

seq1  ATTAAGAAAATGTCTCACAGACAAGCCCAAAGGCCATTCTGTCTGGTCCG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAAATGTCTCACAGACAAGCCCAAAGGCCATTCTGTCTGGTCCG  1045

seq1  TTCTTCATGACGCTAGGTTTCTGTCAGGTTGATAGCTACAGCTATCACAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATGACGCTAGGTTTCTGTCAGGTTGATAGCTACAGCTATCACAC  1095

seq1  AGGGTCAGTGGCAAGTAAGCTGTTAAGAATTC  1128
      ||||||||||||||||||||||||||||||||
seq2  AGGGTCAGTGGCAAGTAAGCTGTTAAGAATTC  1127