BAC Information

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BAC

Clone NameB6Ng01-232E13
Chromosome3 (Build37)7 (Build37)
Map Location 105,886,350 - 105,886,64119,241,217 - 19,241,585
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene1700095B22Rik, Kcnd3, Ddx20, 6530418L21Rik, Rap1a, EG433637, Adora3, I830077J02Rik, Atp5f1, Wdr77, Ovgp1, 1700027A23Rik, LOC100043591, Bclp2, LOC100043594, LOC670819
Downstream geneLOC100043129, Chia, Chi3l3, Chi3l4, EG624696, BC051070, 2010016I18Rik, Dennd2d, Cept1, Tmem77, LOC100043608, 4933421E11Rik, Cd53, Olfr266, Kcna3, AI504432
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232E13.bB6Ng01-232E13.g
ACCGA044659GA044660
length764363
definitionB6Ng01-232E13.b B6Ng01-232E13.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(105,886,350 - 105,886,641)(19,241,217 - 19,241,585)
sequence
gaattctttgttcagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctaatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgctttgcagaagctttgcaatttta
tgaggtcccatttatcgattcttgatcttacagcacaagccattgctgtt
ctattcaggaatttttcccctctacccatatcttcgaggattttccctac
tttctcctctataactttcagtgtctctggttttatgtggagttccttaa
tccacttagatttgaccttagtacaaggagatagaaatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaag
acagcattttcattttcattcctcttgggtgaatttgcttccttttcttc
tagatactttaggtgtgttgtcaagctgctaatgtgtgctttctctagtt
tctttttggaggcactcatagctatgagttttcctcttaggaatgctttc
attgtgtcccataagtttgggtatgttgtagcttcattttcattaaactc
caaaaagtccttaatttcttttctttatttccttccttgaccaaggtatc
attgagaagaatgttgtttcattttccacctgaatgttggctttctatta
tttatattgttaat
caatggttccccaccttgacatggcgaatctccaaagaggagtcaaacct
gggagggccaatgagattgctcagtgtgtggagacatgccattctgaatt
tattcctctgctctcacagggtagatggagataaaggctcctgcaggctc
tgttctgccctacacaggtgtgtgtcatgcacccacaatgtgcacactga
gacacaagccttctgaaacccaaacatacaatagagaattatgaaatcac
acttgaatataatcattgtcatttgctccaaacctaggaaccacagagat
gaatccatgcagatatctctccttctctctctctctctctctctctctct
ctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_105886350_105886641
seq2: B6Ng01-232E13.b_512_806 (reverse)

seq1  AATAACAAAATAAATAATAGAAAGCCAACATTCATGTGGAAACTG-AACA  49
      | |||||| ||||||||||||||||||||||||| ||||||| || ||||
seq2  ATTAACAATATAAATAATAGAAAGCCAACATTCAGGTGGAAAATGAAACA  50

seq1  ACACTCTTCTCAATGATACCTTGGTCAAGGAAGG-AATAAAG-AAAGAAA  97
      ||| |||||||||||||||||||||||||||||| ||||||| |||||||
seq2  ACATTCTTCTCAATGATACCTTGGTCAAGGAAGGAAATAAAGAAAAGAAA  100

seq1  TTAAGGACTTTTTGGAGTTTAATGAAAATGAAGCCACAACATACCCAAAC  147
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTAAGGACTTTTTGGAGTTTAATGAAAATGAAGCTACAACATACCCAAAC  150

seq1  TTATGGGACACAATGAAAGCATTCCTAAGAGGAAAACTCATAGCTCTGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTATGGGACACAATGAAAGCATTCCTAAGAGGAAAACTCATAGCTATGAG  200

seq1  TGCCTCCAAAAAGAAACTAGAGAGAGCACACATTAGCAGCTTGACAACAC  247
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGCCTCCAAAAAGAAACTAGAGAAAGCACACATTAGCAGCTTGACAACAC  250

seq1  ACCTAAAAGCTCTAGAAGAAAAGGAAGCAAATTCACCCAAGAGGA  292
      |||||||   |||||||||||||||||||||||||||||||||||
seq2  ACCTAAAGTATCTAGAAGAAAAGGAAGCAAATTCACCCAAGAGGA  295

seq1: chr7_19241217_19241585
seq2: B6Ng01-232E13.g_69_437 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGGAGAGATA  50

seq1  TCTGCATGGATTCATCTCTGTGGTTCCTAGGTTTGGAGCAAATGACAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATGGATTCATCTCTGTGGTTCCTAGGTTTGGAGCAAATGACAATG  100

seq1  ATTATATTCAAGTGTGATTTCATAATTCTCTATTGTATGTTTGGGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTCAAGTGTGATTTCATAATTCTCTATTGTATGTTTGGGTTTCA  150

seq1  GAAGGCTTGTGTCTCAGTGTGCACATTGTGGGTGCATGACACACACCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTGTGTCTCAGTGTGCACATTGTGGGTGCATGACACACACCTGT  200

seq1  GTAGGGCAGAACAGAGCCTGCAGGAGCCTTTATCTCCATCTACCCTGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGCAGAACAGAGCCTGCAGGAGCCTTTATCTCCATCTACCCTGTGA  250

seq1  GAGCAGAGGAATAAATTCAGAATGGCATGTCTCCACACACTGAGCAATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGAGGAATAAATTCAGAATGGCATGTCTCCACACACTGAGCAATCT  300

seq1  CATTGGCCCTCCCAGGTTTGACTCCTCTTTGGAGATTCGCCATGTCAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCCCTCCCAGGTTTGACTCCTCTTTGGAGATTCGCCATGTCAAGG  350

seq1  TGGGGAACCATTGGAATTC  369
      |||||||||||||||||||
seq2  TGGGGAACCATTGGAATTC  369