BAC Information

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BAC

Clone NameB6Ng01-232G07
Chromosome3 (Build37)
Map Location 18,086,850 - 18,187,231
singlet/doubletdoublet
Overlap geneCyp7b1
Upstream geneEG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153, Armc1, Mtfr1, Pde7a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232G07.bB6Ng01-232G07.g
ACCGA044743GA044744
length1,0861,173
definitionB6Ng01-232G07.b B6Ng01-232G07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(18,186,145 - 18,187,231)(18,086,850 - 18,088,016)
sequence
gaattctgttataggatgaaatcctactgcaaccctagtccctaccacct
aaggaccaccttaagctttccaaaaatttctgaggatccttagtgaaaac
ctgctagtactatggaaggtttggttgtatgctcaaaaactagtcacaac
taagttaggactaattctgatgcatttttgtatatcactactggcaccac
catccccaagattcaaaattaaacatggtacaataagtcctaagcctgag
aaatcagaagaacagcaaacagagattcaaatgactgttttttacttaat
gaaggtgagatatatgtccatacatctcatcacaaaagcacaaataacat
caatgaccaggataatacattttgccaaaatgggtacttgcatattaatg
atacttaagaaaagcaacttagatgacatacaaaacaaagattttttaaa
atagcacttataaatatgttcaagaaaccaaagtgggtatgagtaagtat
aattaaaaccagaaaaatacgaagttgaatgaaagaaaaaagacaattca
cagtataaatggggaattttttaaaaagtttctgtagaaatatgggctga
attaaaaatgtgaaattaaaaattcaataattcaaaattttaaattccat
ggatttaccaatagaatagatcgagtaaatgagagaccaataatacttga
agacagcatagaggaatgaagttacccaatgaaaatgataaatcttaaaa
aatacaaacaaaaatattagaacaatcatatatggttactctgagcaacc
atcaaagactaaatcttagggatcataagtatagaagaaagagaacagcc
tcaggtaaaaggcatagacgatattttcaacaaaatcatagatcccctaa
atataaaggaaaaggatgtcaatcaaggcataagaaaccaaatagaaaag
aacacccacctcagatcatatactagtcaaactctggatgtagaggataa
agggctctaaaacacaaaggaaagaagaccaagtcaactataaagggaag
cccaccaggaaaactgctgatttttgatgcaagatt

gaattcagtccttattgaacctgattggaacatagtatctgtgaatctct
taataatacttcagacttttatggtttaatttgcaatggtgtcccctttg
tctgcctcactggcctttaatctaaggcacaatgcacccactttacattt
atttgaagaaatgcactgaatagctaaggattttttaatgtgcccattta
aaaatagtgattaaaaaaaacacacaggtatggttatttacataagagaa
tgcaagactggctaaggaaagagtgaaatcaaaagtgggtattgccagta
gtttacatgaaatttgacttacagcattgaggctgaaaacttcaacttga
acttattggaagggcaatatcagtgaaaggaaaaactcattaaaatgaaa
aagtcaggagactgggaaaattctgtactctgtgaaaatatcagccaacc
tataaaaaagtaatataaatggcactagctgaatgaagcaaataataata
ttttaggcttcaattttatatgaatgaccattaagtgaaatggaccacaa
ttatggctacatagaccatagaatattcagagaaaatattaatattcata
gcaagacaaaaacatccgcacaatggctgtgtacacatgccatcaaaggg
agttaagctctttaagatgaggtatgtcaatgtagaattgtaatacatgt
atctttgtctgagatccacatgtgtgtcatgtgcaaattttaaaagcctt
tagttaaacaaattatgttaaaatgtttttttttaaaaattatttgttta
tttttacttcatgtgttttgtctgaatgtttttttgtgtgtgtgatagtg
ttgtatcccttggaactttgagttacaaacagttgtgagctgtctatgag
tcctgggaactgaacccggatcctctggaagagcagtcagtgtttttaag
tgttgagccatttccccagctctaaaacttttgtttaaaatatgtaatta
taaaagttcatgtgaatgcattttaagttttattcatattaatagctagc
ataatggtttgtgtgtacaatgaaaaacactattataaattttcagtaga
gagttcactaacctctttaattgttattttggaattcagtcatttataac
ttggctccgaagttatttttatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_18186145_18187231
seq2: B6Ng01-232G07.b_46_1131 (reverse)

seq1  AATCTTGCATTCAAAAATCAGCAGTTTTTCTGGTGGGCTTCCCTTTATAG  50
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  AATCTTGCA-TCAAAAATCAGCAGTTTTCCTGGTGGGCTTCCCTTTATAG  49

seq1  TTGACTTGGTC-TCTTTCTTTTGTGTTTTAGAAGCCCTTTATCCTCTACA  99
      ||||||||||| |||||| |||||||||||| ||||||||||||||||||
seq2  TTGACTTGGTCTTCTTTCCTTTGTGTTTTAG-AGCCCTTTATCCTCTACA  98

seq1  TCCAGAGTTTTGACTAGTATATGATCTGAGGTGGGTGTTCTTTTCTATTT  149
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAG-TTTGACTAGTATATGATCTGAGGTGGGTGTTCTTTTCTATTT  147

seq1  GGTTTCTTATGCCTTGATTGACATCCTTTTCC-TTATATTTAGGGGATCT  198
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGTTTCTTATGCCTTGATTGACATCCTTTTCCTTTATATTTAGGGGATCT  197

seq1  ATGATTTTGTTGAAAATATCGTCTATGCCTTTTACCTGAGGCTGTTCTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTGTTGAAAATATCGTCTATGCCTTTTACCTGAGGCTGTTCTCT  247

seq1  TTCTTCTATACTTATGATCCCTAAGATTTAGTCTTTGATGGTTGCTCAGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTATACTTATGATCCCTAAGATTTAGTCTTTGATGGTTGCTCAGA  297

seq1  GTAACCATATATGATTGTTCTAATATTTTTGTTTGTATTTTTTAAGATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACCATATATGATTGTTCTAATATTTTTGTTTGTATTTTTTAAGATTT  347

seq1  ATCATTTTCATTGGGTAACTTCATTCCTCTATGCTGTCTTCAAGTATTAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTCATTGGGTAACTTCATTCCTCTATGCTGTCTTCAAGTATTAT  397

seq1  TGGTCTCTCATTTACTCGATCTATTCTATTGGTAAATCCATGGAATTTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCTCATTTACTCGATCTATTCTATTGGTAAATCCATGGAATTTAA  447

seq1  AATTTTGAATTATTGAATTTTTAATTTCACATTTTTAATTCAGCCCATAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGAATTATTGAATTTTTAATTTCACATTTTTAATTCAGCCCATAT  497

seq1  TTCTACAGAAACTTTTTAAAAAATTCCCCATTTATACTGTGAATTGTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAGAAACTTTTTAAAAAATTCCCCATTTATACTGTGAATTGTCTT  547

seq1  TTTTCTTTCATTCAACTTCGTATTTTTCTGGTTTTAATTATACTTACTCA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTCATTCAACTTCGTATTTTTCTGGTTTTAATTATACTTACTCA  597

seq1  TACCCACTTTGGTTTCTTGAACATATTTATAAGTGCTATTTTAAAAAATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACTTTGGTTTCTTGAACATATTTATAAGTGCTATTTTAAAAAATC  647

seq1  TTTGTTTTGTATGTCATCTAAGTTGCTTTTCTTAAGTATCATTAATATGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTATGTCATCTAAGTTGCTTTTCTTAAGTATCATTAATATGC  697

seq1  AAGTACCCATTTTGGCAAAATGTATTATCCTGGTCATTGATGTTATTTGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTACCCATTTTGGCAAAATGTATTATCCTGGTCATTGATGTTATTTGT  747

seq1  GCTTTTGTGATGAGATGTATGGACATATATCTCACCTTCATTAAGTAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTGTGATGAGATGTATGGACATATATCTCACCTTCATTAAGTAAAA  797

seq1  AACAGTCATTTGAATCTCTGTTTGCTGTTCTTCTGATTTCTCAGGCTTAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCATTTGAATCTCTGTTTGCTGTTCTTCTGATTTCTCAGGCTTAG  847

seq1  GACTTATTGTACCATGTTTAATTTTGAATCTTGGGGATGGTGGTGCCAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATTGTACCATGTTTAATTTTGAATCTTGGGGATGGTGGTGCCAGT  897

seq1  AGTGATATACAAAAATGCATCAGAATTAGTCCTAACTTAGTTGTGACTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATATACAAAAATGCATCAGAATTAGTCCTAACTTAGTTGTGACTAG  947

seq1  TTTTTGAGCATACAACCAAACCTTCCATAGTACTAGCAGGTTTTCACTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGCATACAACCAAACCTTCCATAGTACTAGCAGGTTTTCACTAA  997

seq1  GGATCCTCAGAAATTTTTGGAAAGCTTAAGGTGGTCCTTAGGTGGTAGGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTCAGAAATTTTTGGAAAGCTTAAGGTGGTCCTTAGGTGGTAGGG  1047

seq1  ACTAGGGTTGCAGTAGGATTTCATCCTATAACAGAATTC  1087
      |||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGTTGCAGTAGGATTTCATCCTATAACAGAATTC  1086


seq1: chr3_18086850_18088016
seq2: B6Ng01-232G07.g_67_1239

seq1  GAATTCAGTCCTTATTGAACCTGATTGGAACATAGTATCTGTGAATCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCTTATTGAACCTGATTGGAACATAGTATCTGTGAATCTCT  50

seq1  TAATAATACTTCAGACTTTTATGGTTTAATTTGCAATGGTGTCCCCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATACTTCAGACTTTTATGGTTTAATTTGCAATGGTGTCCCCTTTG  100

seq1  TCTGCCTCACTGGCCTTTAATCTAAGGCACAATGCACCCACTTTACATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCACTGGCCTTTAATCTAAGGCACAATGCACCCACTTTACATTT  150

seq1  ATTTGAAGAAATGCACTGAATAGCTAAGGATTTTTTAATGTGCCCATTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAGAAATGCACTGAATAGCTAAGGATTTTTTAATGTGCCCATTTA  200

seq1  AAAATAGTGATTAAAAAAAACACACAGGTATGGTTATTTACATAAGAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGTGATTAAAAAAAACACACAGGTATGGTTATTTACATAAGAGAA  250

seq1  TGCAAGACTGGCTAAGGAAAGAGTGAAATCAAAAGTGGGTATTGCCAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGACTGGCTAAGGAAAGAGTGAAATCAAAAGTGGGTATTGCCAGTA  300

seq1  GTTTACATGAAATTTGACTTACAGCATTGAGGCTGAAAACTTCAACTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACATGAAATTTGACTTACAGCATTGAGGCTGAAAACTTCAACTTGA  350

seq1  ACTTATTGGAAGGGCAATATCAGTGAAAGGAAAAACTCATTAAAATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATTGGAAGGGCAATATCAGTGAAAGGAAAAACTCATTAAAATGAAA  400

seq1  AAGTCAGGAGACTGGGAAAATTCTGTACTCTGTGAAAATATCAGCCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGGAGACTGGGAAAATTCTGTACTCTGTGAAAATATCAGCCAACC  450

seq1  TATAAAAAAGTAATATAAATGGCACTAGCTGAATGAAGCAAATAATAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAAGTAATATAAATGGCACTAGCTGAATGAAGCAAATAATAATA  500

seq1  TTTTAGGCTTCAATTTTATATGAATGACCATTAAGTGAAATGGACCACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGCTTCAATTTTATATGAATGACCATTAAGTGAAATGGACCACAA  550

seq1  TTATGGCTACATAGACCATAGAATATTCAGAGAAAATATTAATATTCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTACATAGACCATAGAATATTCAGAGAAAATATTAATATTCATA  600

seq1  GCAAGACAAAAACATCCGCACAATGGCTGTGTACACATGCCATCAAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGACAAAAACATCCGCACAATGGCTGTGTACACATGCCATCAAAGGG  650

seq1  AGTTAAGCTCTTTAAGATGAGGTATGTCAATGTAGAATTGTAATACATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGCTCTTTAAGATGAGGTATGTCAATGTAGAATTGTAATACATGT  700

seq1  ATCTTTGTCTGAGATCCACATGTGTGTCATGTGCAAATTTTAAAAGCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGTCTGAGATCCACATGTGTGTCATGTGCAAATTTTAAAAGCCTT  750

seq1  TAGTTAAACAAATTATGTTAAAATGTTTTTTTTTAAAAATTATTTGTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAAACAAATTATGTTAAAATGTTTTTTTTTAAAAATTATTTGTTTA  800

seq1  TTTTTACTTCATGTGTTTTGTCTGAATGTTTTTTTGTGTGTGTGATAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTTCATGTGTTTTGTCTGAATGTTTTTTTGTGTGTGTGATAGTG  850

seq1  TTGTATCCCTTGGAAC-TTGAGTTACAAACAGTTGTGAGCTGTCTATGAG  899
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTGTATCCCTTGGAACTTTGAGTTACAAACAGTTGTGAGCTGTCTATGAG  900

seq1  TCCTGGGAACTGAACCCGGATCCTCTGGAAGAGCAGTCAGTGTTTTTAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGGAACTGAACCCGGATCCTCTGGAAGAGCAGTCAGTGTTTTTAAG  950

seq1  TGTTGAGCCATTTCCCCAGCTCTAAAACTTTTGTTTAAAATATGTAATTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAGCCATTTCCCCAGCTCTAAAACTTTTGTTTAAAATATGTAATTA  1000

seq1  TAAAAGTTCATGTGAATGCATTTTAAGTTTTA-TCATATTAATAGCTAGC  1048
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TAAAAGTTCATGTGAATGCATTTTAAGTTTTATTCATATTAATAGCTAGC  1050

seq1  ATAATGGTT--TGTGTACAATG-AAAACACTA-TATACATTTTCAGT--A  1092
      |||||||||  ||||||||||| ||||||||| |||| |||||||||  |
seq2  ATAATGGTTTGTGTGTACAATGAAAAACACTATTATAAATTTTCAGTAGA  1100

seq1  GAGTTCACTAAAACCTTCTTAATTG-TATTTT-GAATTTAATCTATTTAT  1140
      |||||||||  |||||  ||||||| |||||| ||||| | || ||||||
seq2  GAGTTCACT--AACCTCTTTAATTGTTATTTTGGAATTCAGTC-ATTTAT  1147

seq1  AAATTGCTTCCAAAAGTTATTTTTATG  1167
      || |||  |||  ||||||||||||||
seq2  AACTTGGCTCC-GAAGTTATTTTTATG  1173


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