BAC Information

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BAC

Clone NameB6Ng01-232M05
Chromosome3 (Build37)
Map Location 37,378,617 - 37,551,297
singlet/doubletdoublet
Overlap geneSpata5, LOC665778, Spry1
Upstream gene1810062G17Rik, LOC665709, Exosc9, Ccna2, Bbs7, Trpc3, 4932438A13Rik, Tenr, LOC652987, Il2, Il21, Cetn4, Bbs12, LOC100041328, Fgf2, LOC100040649, Nudt6
Downstream geneEG381438, LOC100038875, LOC100041338, EG626367, 4930556A17Rik, LOC665811, EG665821, LOC100041366, LOC100040785, LOC665838, Ankrd50, LOC100041378, LOC665855, LOC100040824
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232M05.bB6Ng01-232M05.g
ACCGA045014GA045015
length883191
definitionB6Ng01-232M05.b B6Ng01-232M05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,378,617 - 37,379,492)(37,551,107 - 37,551,297)
sequence
gaattcaaagtacgctgattctttcatagcagatatcaggcaaatcaaaa
gggccctaataaagtgggaaaagaaaagaataaagaacattggttatttg
gtcccatgtaatctgtccgtggtggagatttactatatcactttaactgc
tatccaaatgtttgttttcatcaagtagagaaacatacatggctggagat
gtacctcagttgggagaatgcttgcctggtatgcatgagtatctgaattt
ggtctccagtgcctcttaaaccacattgtggtacatgcttctaattccag
tactaaggggatttttaaaatcatccttccctccaaggtatatcagaggg
cagccaaggctacatgaaaccatatctctttttaaaggggaaacaataat
gagtgtgtgtgtgtgtgtatctatgtatatgttaaagggttggtttcttc
atcatgagactccaagttaaataccacaaaattagccgggtgtggtggca
catgcctttagtcctagcactcggaggtggatttctgagttcgaggccaa
gcctggtctacaaagtgagttccaggacagccagggctacacagagaaac
cctgtctcaaaaagaaaaccaccaaaaaaaaaaaaaaaaaaaaaaaaaac
ccacaaaaattagaaagtggatgacatttgttcaggcataactggggagc
agctaccacagtctggactgttgtacaccattgttccttataaggattat
ctgttaactcatcctttttactatttttagctccaatatttcttctgttc
tgagccatttttccttcatttcatctggtaattccaaaatctaatagtgg
aaggaatttggttttactgttaaatgatgtttg
ccacaggacagagctcactttctgatcttgctgctgccaaagcccagagt
ccttctcaggtaccctggttggtattttctgggttttttttctttttttt
tttggtgtgtgtgtgcatgtagaggaatgctttgtttttgttttttgttt
gtttggctggtttagtttggtttgggttttggggtttgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_37378617_37379492
seq2: B6Ng01-232M05.b_48_930

seq1  GAATTCAAAGTACGCTGATTCTTTCATAGCAGATATCAGGCAAATCAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTACGCTGATTCTTTCATAGCAGATATCAGGCAAATCAAAA  50

seq1  GGGCCCTAATAAAGTGGGAAAAGAAAAGAATAAAGAACATTGGTTATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTAATAAAGTGGGAAAAGAAAAGAATAAAGAACATTGGTTATTTG  100

seq1  GTCCCATGTAATCTGTCCGTGGTGGAGATTTACTATATCACTTTAACTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCATGTAATCTGTCCGTGGTGGAGATTTACTATATCACTTTAACTGC  150

seq1  TATCCAAATGTTTGTTTTCATCAAGTAGAGAAACATACATGGCTGGAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAATGTTTGTTTTCATCAAGTAGAGAAACATACATGGCTGGAGAT  200

seq1  GTACCTCAGTTGGGAGAATGCTTGCCTGGTATGCATGAGTATCTGAATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTCAGTTGGGAGAATGCTTGCCTGGTATGCATGAGTATCTGAATTT  250

seq1  GGTCTCCAGTGCCTCTTAAACCACATTGTGGTACATGCTTCTAATTCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCCAGTGCCTCTTAAACCACATTGTGGTACATGCTTCTAATTCCAG  300

seq1  TACTAAGGGGATTTTTAAAATCATCCTTCCCTCCAAGGTATATCAGAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGGGGATTTTTAAAATCATCCTTCCCTCCAAGGTATATCAGAGGG  350

seq1  CAGCCAAGGCTACATGAAACCATATCTCTTTTTAAAGGGGAAACAATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAAGGCTACATGAAACCATATCTCTTTTTAAAGGGGAAACAATAAT  400

seq1  GAGTGTGTGTGTGTGTGTATCTATGTATATGTTAAAGGGTTGGTTTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTGTGTGTGTGTGTATCTATGTATATGTTAAAGGGTTGGTTTCTTC  450

seq1  ATCATGAGACTCCAAGTTAAATACCACAAAATTAGCCGGGTGTGGTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAGACTCCAAGTTAAATACCACAAAATTAGCCGGGTGTGGTGGCA  500

seq1  CATGCCTTTAGTCCTAGCACTCGGAGGTGGATTTCTGAGTTCGAGGCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTTAGTCCTAGCACTCGGAGGTGGATTTCTGAGTTCGAGGCCAA  550

seq1  GCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTACACAGAGAAAC  600

seq1  CCTGTCTCAAAAAGAAAACCACCAAAAAAAAAAAAAAAAAAAAAAAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTCAAAAAGAAAACCACCAAAAAAAAAAAAAAAAAAAAAAAAAAC  650

seq1  CCAC-AAAATTAG-AAGTGGATGACATTTGTTCAGGCATAACTGGGGAGC  698
      |||| |||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCACAAAAATTAGAAAGTGGATGACATTTGTTCAGGCATAACTGGGGAGC  700

seq1  AGCTACCACAGTCTGGACTGTTGTACACCATTGTTCC-TATAAGGATTAT  747
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGCTACCACAGTCTGGACTGTTGTACACCATTGTTCCTTATAAGGATTAT  750

seq1  CTGTTAACTCATCCTTTTTACTA-TTTTAGCTCCAATATTTCTTCTGTTC  796
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTGTTAACTCATCCTTTTTACTATTTTTAGCTCCAATATTTCTTCTGTTC  800

seq1  TGAGCCATTTTTCCTTCATTTCATCTGGTAATTCCAAAATCT-ATAGTGG  845
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGAGCCATTTTTCCTTCATTTCATCTGGTAATTCCAAAATCTAATAGTGG  850

seq1  AAGAAATTT-GTTTTACTGTT-AATGATGTTTG  876
      ||| ||||| ||||||||||| |||||||||||
seq2  AAGGAATTTGGTTTTACTGTTAAATGATGTTTG  883

seq1: chr3_37551107_37551297
seq2: B6Ng01-232M05.g_77_267 (reverse)

seq1  ACCCAAACCCCAAAACCCAAACCAAACTAAACCAGCCAAACAAACAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAAACCCCAAAACCCAAACCAAACTAAACCAGCCAAACAAACAAAAA  50

seq1  ACAAAAACAAAGCATTCCTCTACATGCACACACACACCAAAAAAAAAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACAAAGCATTCCTCTACATGCACACACACACCAAAAAAAAAAAG  100

seq1  AAAAAAAACCCAGAAAATACCAACCAGGGTACCTGAGAAGGACTCTGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAACCCAGAAAATACCAACCAGGGTACCTGAGAAGGACTCTGGGC  150

seq1  TTTGGCAGCAGCAAGATCAGAAAGTGAGCTCTGTCCTGTGG  191
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCAGCAGCAAGATCAGAAAGTGAGCTCTGTCCTGTGG  191