BAC Information

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BAC

Clone NameB6Ng01-233D07
Chromosome3 (Build37)
Map Location 63,721,764 - 63,722,874
singlet/doubletsinglet
Overlap geneE130311K13Rik
Upstream geneLOC676984, LOC666967, Mme, Plch1, LOC100040836
Downstream geneSlc33a1, Gmps, LOC670032, EG56544, 4930518C23Rik, LOC380739, EG637004, EG667031, EG637053, LOC672951, EG639869, EG667060, EG667069, LOC100040918, 4933425M15Rik, LOC670110
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233D07.bB6Ng01-233D07.g
ACCGA045336GA045337
length9531,107
definitionB6Ng01-233D07.b B6Ng01-233D07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactcagtgataagtggacgttagctcagaatacccaagatataa
ttcacagaccacatgaagctcaagaacaataaaaaccaaagtgtggatgc
ttcagtcattcttagaaaggggaacaaaatgctccaggggacaaatataa
agacagaacagtgactgaagcaaaggccatccagagtctgtcccacctga
gtcttcatcccatatacagtcaccaaaccccgactctaatgtggatgtca
agaaatgcttgctgacttatttacaatagccagaagctggaaagaaccca
gatgcccctcaaaagaggaatggatacagaaattgtggtacatttacaca
atggagtgctactcagctattaaaaacaattattcatgaaattcttaggc
aaattgatgcatatggaggatgtcatcctgagtgaggtaatacaatcaga
aaagaacacacatgggggaaaatatggagacaaagggtagagcagtgaat
gaaggaaacgacatccagtgtctatcgaacctagggcttcaccacatata
cagtcaccaaacccagacactattgtggatgccaacaactgcttgctgaa
aggttccttatatagctgcctactgagaggccctgccagaaccttacaaa
atcagaggtggatgctcacagtcaaccattgaactgagcatggggacccc
aatggaggagttagaaaaaggactgaaggagctggagggatttgcaaccc
cataggaagaacaacaatatcaaccagccagagcccccagagatcccatg
gactaaacaaccaaccaaaggagtacacatggctccaggtgcatatgtag
cagaggatggcctagtcagacatcactgggaacagtggtccttggtccta
tgagcccaattggttgctccagtgtaggagagtggagggctgggaagggg
gaa
gaattcataggaataaagcagatcctgttttatttgttattatttaacaa
agctaggaaaatcaggtattgatagcttcatttaaagtaagtcacgggga
tggagagatggctaagcagtttaagagtgtttgctgatcttggagaggac
tggagttcagctcttaacacccacatagggaggttcagagctgtgggtat
ctccagctctaggaaatccaactccctcttctggtgtctgtctggtgtct
acacacacgtgtgcatacatgtagacatatgtagacatagatatacataa
aaacaaatcctaagaaagcacaacataacaaaacaagcgctcccttcaca
atccagtgaaccacagttggatcctagcacccacgttacagaccagtgtt
tcgtacatacttataactccaacacagaaggatcctgtgcccttttgtag
caggctcatccatgtgcatgcaagtacactcacacacacacactcatgtg
cacataatctcaagcagacagatgcacaaacacacattcacacacgaaca
catatacagtttaaaaaagtaaaccacaattgatgtgaagttaatctata
atttcaaattttataatgtcaaagttcctgggttaaacatggcaatagtt
tataagattctacaaaacaaagtaatccttaggaaaagaaaaaggcttta
atacaaaattaaaaagaaaacattatttctctaggcaagaaaatgtgtgt
tcatgacgacaaaaaagagttatgcacagtttattatatttgtctcagtt
ttaaacattctataagctcattttcttgaaccaaaccaaacaactaagtt
tcagtctcacacattagtagaattcaagcagaagttactgaatcccatag
tgtgcacagcatggtttgttcacataggaaacaatgtgagatgtggagtg
aaaggtgggctttcgagccagttggtttagtctgggcaagacatcacacg
cttagagtctacctgtcattgagacagcatcccacagatagtttcagtat
acaagagtagtgtgtatgcatttacttttacggcttcttgttgtggtgag
cacacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_63721764_63722874
seq2: B6Ng01-233D07.g_66_1172

seq1  GAATTCATAGGAATAAAGCAGATCCTGTTTTATTTGTTATTATTTAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAGGAATAAAGCAGATCCTGTTTTATTTGTTATTATTTAACAA  50

seq1  AGCTAGGAAAATCAGGTATTGATAGCTTCATTTAAAGTAAGTCACGGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGAAAATCAGGTATTGATAGCTTCATTTAAAGTAAGTCACGGGGA  100

seq1  TGGAGAGATGGCTAAGCAGTTTAAGAGTGTTTGCTGATCTTGGAGAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGATGGCTAAGCAGTTTAAGAGTGTTTGCTGATCTTGGAGAGGAC  150

seq1  TGGAGTTCAGCTCTTAACACCCACATAGGGAGGTTCAGAGCTGTGGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTTCAGCTCTTAACACCCACATAGGGAGGTTCAGAGCTGTGGGTAT  200

seq1  CTCCAGCTCTAGGAAATCCAACTCCCTCTTCTGGTGTCTGTCTGGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTCTAGGAAATCCAACTCCCTCTTCTGGTGTCTGTCTGGTGTCT  250

seq1  ACACACACGTGTGCATACATGTAGACATATGTAGACATAGATATACATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACGTGTGCATACATGTAGACATATGTAGACATAGATATACATAA  300

seq1  AAACAAATCCTAAGAAAGCACAACATAACAAAACAAGCGCTCCCTTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAATCCTAAGAAAGCACAACATAACAAAACAAGCGCTCCCTTCACA  350

seq1  ATCCAGTGAACCACAGTTGGATCCTAGCACCCACGTTACAGACCAGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGAACCACAGTTGGATCCTAGCACCCACGTTACAGACCAGTGTT  400

seq1  TCGTACATACTTATAACTCCAACACAGAAGGATCCTGTGCCCTTTTGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTACATACTTATAACTCCAACACAGAAGGATCCTGTGCCCTTTTGTAG  450

seq1  CAGGCTCATCCATGTGCATGCAAGTACACTCACACACACACACTCATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCATCCATGTGCATGCAAGTACACTCACACACACACACTCATGTG  500

seq1  CACATAATCTCAAGCAGACAGATGCACAAACACACATTCACACACGAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAATCTCAAGCAGACAGATGCACAAACACACATTCACACACGAACA  550

seq1  CATATACAGTTTAAAAAAGTAAACCACAATTGATGTGAAGTTAATCTATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACAGTTTAAAAAAGTAAACCACAATTGATGTGAAGTTAATCTATA  600

seq1  ATTTCAAATTTTATAATGTCAAAGTTCCTGGGTTAAACATGGCAATAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAATTTTATAATGTCAAAGTTCCTGGGTTAAACATGGCAATAGTT  650

seq1  TATAAGATTCTACAAAACAAAGTAATCCTTAGGAAAAGAAAAAGGCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGATTCTACAAAACAAAGTAATCCTTAGGAAAAGAAAAAGGCTTTA  700

seq1  ATACAAAATTAAAAAGAAAACATTATTTCTCTAGGCAAGAAAATGTGTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAATTAAAAAGAAAACATTATTTCTCTAGGCAAGAAAATGTGTGT  750

seq1  TCATGACGACAAAAAAGAGTTATGCACAGTTTATTATATTTGTCTCAGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACGACAAAAAAGAGTTATGCACAGTTTATTATATTTGTCTCAGTT  800

seq1  TTAAACATTCTATAAGCTCATTTTCTTGAACCAAACCAAACAACTAAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACATTCTATAAGCTCATTTTCTTGAACCAAACCAAACAACTAAGTT  850

seq1  TCAGTCTCACACATTAGTAGAATTCAAGCAGAAGTTACTGAATCCCATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCACACATTAGTAGAATTCAAGCAGAAGTTACTGAATCCCATAG  900

seq1  TGTGCACAGCATGG-TTGTTCACATAGGAAACAATGTGAGGATGTGGAGT  949
      |||||||||||||| |||||||||||||||||||||||| ||||||||||
seq2  TGTGCACAGCATGGTTTGTTCACATAGGAAACAATGTGA-GATGTGGAGT  949

seq1  G-AAGGTGGGCTTTCGAGCCAGTTGG-TTAGTCTGGGCAAGACAATCACC  997
      | |||||||||||||||||||||||| |||||||||||||||| |||| |
seq2  GAAAGGTGGGCTTTCGAGCCAGTTGGTTTAGTCTGGGCAAGAC-ATCA-C  997

seq1  ACGGCTTAGAGTCCTACCTGTCATTGAGACCAGCATCCCCACAGGATAGT  1047
      || ||||||||| |||||||||||||||| |||||| |||||| ||||||
seq2  AC-GCTTAGAGT-CTACCTGTCATTGAGA-CAGCAT-CCCACA-GATAGT  1042

seq1  TTCAGTATACAAGAAGTAGTGTGTATGGCATTTACTTTTACGGCTTCT--  1095
      ||||||||||||| |||||||||||| |||||||||||||||||||||  
seq2  TTCAGTATACAAG-AGTAGTGTGTAT-GCATTTACTTTTACGGCTTCTTG  1090

seq1  GTGT-GTGAGCACACAG  1111
       ||| ||||||||||||
seq2  TTGTGGTGAGCACACAG  1107