BAC Information

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BAC

Clone NameB6Ng01-233E02
Chromosome3 (Build37)
Map Location 137,880,201 - 137,881,307
singlet/doubletsinglet
Overlap geneAdh7
Upstream geneLOC100039447, Emcn, EG229862, Ddit4l, LOC668874, H2afz, Dnajb14, Map2k1ip1, Dapp1, EG329763, LOC100039528, Mttp, Rg9mtd2, 4930579F01Rik
Downstream geneAdh1, Adh6a, LOC639769, Adh4, Adh5, Metap1, EG383925, EG668879, Eif4e, EG545570, LOC668881, LOC668882, Ppia-ps3_1437.1, Tspan5, LOC620771, Rap1gds1, EG229879, B930007M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233E02.bB6Ng01-233E02.g
ACCGA045372GA045373
length1,1781,107
definitionB6Ng01-233E02.b B6Ng01-233E02.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatggctgagaagcacctgaaaaaatg
ttcaacacccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcataccagtcggaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcttccactgctggtg
ggattgcaagcttgtacaaccactctggaagtcagtctggaggttcctca
gaagtttggaaatactactacgggaagatccagcaatacctctcgtgcgc
atatacccagaaaaagttccaactggtaataagaacacatggtccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaagaatggatacaggaaatgtggtacatttacacaatg
gagtactactcagctattaaaaacaatggatttatgaaattcttggacaa
atggatgtatttggaggatatcattcctagtgaggtaacccaatcacaaa
agaagtcattagatatgtactcactgataagtgtatattagcccagaaac
atagaacactcaagatacaatttgcaaaacacaagaaaatcaagaagagg
aaaaaccaacgggtggatacttcattcctccttagaatatgggacaaaat
acacatgaaaggagttacagagacaaactttggagctaagacgaaaggat
ggactatccagaaactaccccacccggggatccatcccataatcagtcac
caaacccagacactattgcatatgccataaagattttgctgaagaggacc
ctaatatagctgtctcttgtgaggctatgccagtgcctggcaaacacaaa
agtggatgctcacagtcatctataagatggaacacagggcccccaatgga
gaagctagagaaagcacccaaggagctgaaaggtgttctgcaaccctatt
agtggaaccacaattatggaacttaacagtaccccagagctcatatcttc
ttagctgcatatggtagcgaaagatggcttagtttgccatctttggaagg
aaggccctgatttgccaactttatatgtctccattaagggggaatgcaag
gctaaaagctggattgtgtgtgcgtagt
gaattcagggacttgaggcaactgctcctaactataatgaagaatgcagt
gtgtgtgacaaataacacaacatacgtacatgatatacaattgtatgtgt
atgttgctaagaacggagaccggatcaagtcatgtgctctactatggagt
cataccacaaccctcatttatatttaaccacactttctacaagctatatc
gagtgcaaatggagtgcaaatacaaatgcctaaccacatagctaaagtca
gctacctgacagaacagcttgcacgtagaaggcatgcaatgcactctgta
tcaattggacagagctgaactaacacgacctgtttttatattctctaaaa
taaaatgggtaagggtgttttctggcccttcatagtagacttgattatcc
aatgtttgttagcttcttatttttgtctaatcataatgtgtattgtattt
cttttcaccacttgacttgcaggagggtggagcttcttgggttgggaaaa
ttctaaggctatgagtcatgttgccaaaggcaagcagaacttccaagtca
cgctatttattgaaggccgaagatgctggtacccatagaagagtgaaccg
tgcctcagtcagaagacgttcctgtttgcaggccacacacccaggagagg
caggatgggcaccgctggaaaagtaagggaaacgtttcagcttgttcagt
ctcttgagctaataatgggggttgcttctgagagatctgaatcctggaga
gaaactaaatactatttctcgaggaaggcaaggctgttaagtaacacacg
ttggggagatgtgggtaaattgcatcagaataccaatcgcagcaggattc
aatttgaaaaccacatgctgaacgttctcccagaaagcagggaagggaag
tagagaactgggattttctatgggcattattcatatttagtttccagcta
gccagtcatttgctctggaatagcaaactgtttccataagagacttcaac
agggtcagtggtatctccccatccctttctagagttctaaagggttcaag
atctcttgtgttgggggatcgtgccctactgttgagattgtaaaagtgat
ttcagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_137880201_137881307
seq2: B6Ng01-233E02.g_65_1171

seq1  GAATTCAGGGACTTGAGGCAACTGCTCCTAACTATAATGAAGAATGCAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGGACTTGAGGCAACTGCTCCTAACTATAATGAAGAATGCAGT  50

seq1  GTGTGTGACAAATAACACAACATACGTACATGATATACAATTGTATGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGACAAATAACACAACATACGTACATGATATACAATTGTATGTGT  100

seq1  ATGTTGCTAAGAACGGAGACCGGATCAAGTCATGTGCTCTACTATGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGCTAAGAACGGAGACCGGATCAAGTCATGTGCTCTACTATGGAGT  150

seq1  CATACCACAACCCTCATTTATATTTAACCACACTTTCTACAAGCTATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCACAACCCTCATTTATATTTAACCACACTTTCTACAAGCTATATC  200

seq1  GAGTGCAAATGGAGTGCAAATACAAATGCCTAACCACATAGCTAAAGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCAAATGGAGTGCAAATACAAATGCCTAACCACATAGCTAAAGTCA  250

seq1  GCTACCTGACAGAACAGCTTGCACGTAGAAGGCATGCAATGCACTCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTGACAGAACAGCTTGCACGTAGAAGGCATGCAATGCACTCTGTA  300

seq1  TCAATTGGACAGAGCTGAACTAACACGACCTGTTTTTATATTCTCTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGGACAGAGCTGAACTAACACGACCTGTTTTTATATTCTCTAAAA  350

seq1  TAAAATGGGTAAGGGTGTTTTCTGGCCCTTCATAGTAGACTTGATTATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGGGTAAGGGTGTTTTCTGGCCCTTCATAGTAGACTTGATTATCC  400

seq1  AATGTTTGTTAGCTTCTTATTTTTGTCTAATCATAATGTGTATTGTATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGTTAGCTTCTTATTTTTGTCTAATCATAATGTGTATTGTATTT  450

seq1  CTTTTCACCACTTGACTTGCAGGAGGGTGGAGCTTCTTGGGTTGGGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCACCACTTGACTTGCAGGAGGGTGGAGCTTCTTGGGTTGGGAAAA  500

seq1  TTCTAAGGCTATGAGTCATGTTGCCAAAGGCAAGCAGAACTTCCAAGTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGCTATGAGTCATGTTGCCAAAGGCAAGCAGAACTTCCAAGTCA  550

seq1  CGCTATTTATTGAAGGCCGAAGATGCTGGTACCCATAGAAGAGTGAACCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTATTTATTGAAGGCCGAAGATGCTGGTACCCATAGAAGAGTGAACCG  600

seq1  TGCCTCAGTCAGAAGACGTTCCTGTTTGCAGGCCACACACCCAGGAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAGTCAGAAGACGTTCCTGTTTGCAGGCCACACACCCAGGAGAGG  650

seq1  CAGGATGGGCACCGCTGGAAAAGTAAGGGAAACGTTTCAGCTTGTTCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATGGGCACCGCTGGAAAAGTAAGGGAAACGTTTCAGCTTGTTCAGT  700

seq1  CTCTTGAGCTAATAATGGGGGTTGCTTCTGAGAGATCTGAATCCTGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAGCTAATAATGGGGGTTGCTTCTGAGAGATCTGAATCCTGGAGA  750

seq1  GAAACTAAATACTATTTCTCGAGGAAGGCAAGGCTGTTAAGTAACACACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAATACTATTTCTCGAGGAAGGCAAGGCTGTTAAGTAACACACG  800

seq1  TTGGGGAGATGTGGGTAAATTGCATCAGAATACCAATCGCAGCAGGATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAGATGTGGGTAAATTGCATCAGAATACCAATCGCAGCAGGATTC  850

seq1  AA-TTGAAAACCACATGCTGAACGTTCTCCCAGAAAGCAGGGAAGGGAAG  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAAAACCACATGCTGAACGTTCTCCCAGAAAGCAGGGAAGGGAAG  900

seq1  TAGAGAACTGGGA-TTTCTATGGGCATTATTCATAATTTAGTTTCCAGCT  948
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  TAGAGAACTGGGATTTTCTATGGGCATTATTCAT-ATTTAGTTTCCAGCT  949

seq1  AGCCAGTCATTTGCTCTGG-ATAGCAAACTGTTTCCATAAGGAGACTTCA  997
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  AGCCAGTCATTTGCTCTGGAATAGCAAACTGTTTCCATAA-GAGACTTCA  998

seq1  ACAGGGTCAGTGGTATCTCCCCAATCCCTTTCTAGAG-TCTAAAGGGTCC  1046
      |||||||||||||||||||||| |||||||||||||| |||||||||| |
seq2  ACAGGGTCAGTGGTATCTCCCC-ATCCCTTTCTAGAGTTCTAAAGGGTTC  1047

seq1  AGGATCTCCTGTGTTGGGGGATCGTGCCCTACTGTTGAGAATGGAAAAAG  1096
      | |||||| |||||||||||||||||||||||||||||| || | |||||
seq2  AAGATCTCTTGTGTTGGGGGATCGTGCCCTACTGTTGAG-ATTGTAAAAG  1096

seq1  TGAATTCAGGA  1107
      ||| |||||||
seq2  TGATTTCAGGA  1107