BAC Information

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BAC

Clone NameB6Ng01-233O11
Chromosome3 (Build37)
Map Location 77,209,635 - 77,210,421
singlet/doubletsinglet
Overlap genenone
Upstream geneFstl5, LOC100041625, LOC100041635
Downstream geneDnmt3a-ps1, EG626461, LOC667526, LOC626479
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-233O11.bB6Ng01-233O11.g
ACCGA045826GA045827
length7871,155
definitionB6Ng01-233O11.b B6Ng01-233O11.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattagatttgtaaaagcatgtggaagatttattagacacagaat
attatgttaaattggctctagatgcttcttataaattcttctcatatcta
aatatatctttaggaaattttcaagatagttgaacattaaatcactttgt
gccacaatgtcgacttgtctctgctttcaatagatataataaatgagaca
ttggcttatgttgaaaacattttttaacaaagtagttgattttaaatcag
taagacattacttatttgctaaagtggtactgaagaaagggtttaaatta
cccaatgggtttgagcagggtgtgcattttcttctcctttactccatcaa
tcttttctactccttatgtccatttctgtctttatgtcgtagttctgtct
tgaacttcatgtgtaattcattcagtttttattggaatctaacttttata
tcacctaagtaaaatagctgtttaattattatcatccctgctaatatcct
aatgctgttctgcttgattaagaaattgtgtggcacatttttaatttcct
gtaggaaggttaaagtggaaacaggcccgtttctttaagggcacactgta
gcatcatgttgtagaatgctttctggcagaataaataaaactccaaaagt
gaaagaattaatgactcaaaatattttgcctatcagattaaagacattat
gaacacatgcataagcattactgttgatgagaatgttgaaggcgatttat
ctattggagagagagagaggaagagttgggggggggg

gaattctttatatatattggatattagccctcaactgaatgtgttctttt
tatgtatatttttacttacttattttatttattaatattccaagtgctgc
ccaatttgtgctgtcctttcccagagatcttcaccccacccccctttcct
tttctctcagagatgttgctccctctttcccatttccacccccatcctgt
tcccttccctggggtataaagtcactacaggattaagcacattctctccc
acagaggcagtcctctcctatatacatgacagggaccttggatgttcttt
ggttggtggcttattctctgggagctcccaggggtccaggttagttgaca
ctgtttgttttcccatgaggttcccatccccttcagcttcttccatcctt
cagtcactcttccataggggtcccagatctcagttgactataagtatttg
cacctgtcacagtcagctccagctcatgtatagcctctcagaggagaacc
aggctaggctcctctctgtaaacacaacatagcatctgtaatagtgttag
ggtttggtgcctacccatgggatggatcccaagttgtacccactgaaaag
cctttccttcagtctatattatagttttgtcccttcatttcttttagaca
gaaacaattttgagtaaaaaaaaaaaaaataagtggattggtgaccccat
ccctccactgaggaccctgtcgagctattggagatggtctcttcaggttc
catatctcactgttgagcatttggataagttcattctcagagtcctgata
gcctttcacatcccagatttctgggacttttctagacgttccctccaaac
ctcaaccccccacccagggaagctatatatttctattcattctcctgggt
ctttgggcttctctcctgtctcccctcacatactgactccaccttttccc
ttatccctttccctcctcactcagtttctccctcaactgcttcccctctc
tctctgctccatgatattttgtccccctctagtgagatgattcatctact
gtaccttccttcttgtaatctacagctgtgggtttatcatgaacatatct
acttcggctaattcggctatcagtacataccattcatggccttttgtggg
tacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77209635_77210421
seq2: B6Ng01-233O11.b_46_832 (reverse)

seq1  CCCCCCCCCCAACTCTTCCTCTCTCTCTCTCCAATAGATAAATCGCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCAACTCTTCCTCTCTCTCTCTCCAATAGATAAATCGCCTTC  50

seq1  AACATTCTCATCAACAGTAATGCTTATGCATGTGTTCATAATGTCTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTCTCATCAACAGTAATGCTTATGCATGTGTTCATAATGTCTTTAA  100

seq1  TCTGATAGGCAAAATATTTTGAGTCATTAATTCTTTCACTTTTGGAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATAGGCAAAATATTTTGAGTCATTAATTCTTTCACTTTTGGAGTTT  150

seq1  TATTTATTCTGCCAGAAAGCATTCTACAACATGATGCTACAGTGTGCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTCTGCCAGAAAGCATTCTACAACATGATGCTACAGTGTGCCCT  200

seq1  TAAAGAAACGGGCCTGTTTCCACTTTAACCTTCCTACAGGAAATTAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAACGGGCCTGTTTCCACTTTAACCTTCCTACAGGAAATTAAAAA  250

seq1  TGTGCCACACAATTTCTTAATCAAGCAGAACAGCATTAGGATATTAGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCACACAATTTCTTAATCAAGCAGAACAGCATTAGGATATTAGCAG  300

seq1  GGATGATAATAATTAAACAGCTATTTTACTTAGGTGATATAAAAGTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGATAATAATTAAACAGCTATTTTACTTAGGTGATATAAAAGTTAGA  350

seq1  TTCCAATAAAAACTGAATGAATTACACATGAAGTTCAAGACAGAACTACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAATAAAAACTGAATGAATTACACATGAAGTTCAAGACAGAACTACG  400

seq1  ACATAAAGACAGAAATGGACATAAGGAGTAGAAAAGATTGATGGAGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAGACAGAAATGGACATAAGGAGTAGAAAAGATTGATGGAGTAAA  450

seq1  GGAGAAGAAAATGCACACCCTGCTCAAACCCATTGGGTAATTTAAACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGAAAATGCACACCCTGCTCAAACCCATTGGGTAATTTAAACCCT  500

seq1  TTCTTCAGTACCACTTTAGCAAATAAGTAATGTCTTACTGATTTAAAATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCAGTACCACTTTAGCAAATAAGTAATGTCTTACTGATTTAAAATC  550

seq1  AACTACTTTGTTAAAAAATGTTTTCAACATAAGCCAATGTCTCATTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTTTGTTAAAAAATGTTTTCAACATAAGCCAATGTCTCATTTATT  600

seq1  ATATCTATTGAAAGCAGAGACAAGTCGACATTGTGGCACAAAGTGATTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTATTGAAAGCAGAGACAAGTCGACATTGTGGCACAAAGTGATTTA  650

seq1  ATGTTCAACTATCTTGAAAATTTCCTAAAGATATATTTAGATATGAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCAACTATCTTGAAAATTTCCTAAAGATATATTTAGATATGAGAAG  700

seq1  AATTTATAAGAAGCATCTAGAGCCAATTTAACATAATATTCTGTGTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATAAGAAGCATCTAGAGCCAATTTAACATAATATTCTGTGTCTAA  750

seq1  TAAATCTTCCACATGCTTTTACAAATCTAATGAATTC  787
      |||||||||||||||||||||||||||||||||||||
seq2  TAAATCTTCCACATGCTTTTACAAATCTAATGAATTC  787


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