BAC Information

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BAC

Clone NameB6Ng01-234K15
Chromosome3 (Build37)
Map Location 118,301,458 - 118,302,623
singlet/doubletsinglet
Overlap geneDpyd
Upstream gene4833424O15Rik, EG668759, Snx7, LOC100043260
Downstream geneLOC100043275
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-234K15.bB6Ng01-234K15.g
ACCGA046365GA046366
length1,2131,167
definitionB6Ng01-234K15.b B6Ng01-234K15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgatgttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgattttctcaaagaaccaactcctcgtttggttaattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaatttgcttccttttttctagagc
ttttagatgtgtgtcaagctgctagtatgtgctctctccggtttttcttg
aaggcactcatagctatgagtttccctcttagaatgctttcattgtgtcc
caaaagtttgggtacggtgtggcttcattttcatcaaactactaagaaag
tcttgagtttcattcgtatcgttccttgaccaacgaattcatggagacaa
gagcgttgattcgaagtcccattggcacgtagcacttcggttattcatat
gtattgagatcagtctatgcatgccgcatcggagagatcccatggacaaa
tttccaattttga
gaattccaaaggctcttgccttgtgtgccaatctttcatcaatcggtgct
gggtaataattgttattctcctttataaacatttcatatcaattataagt
gttttccatgtggtattatttttaattcctaatgtaaaaaagaacagcta
ttataatatcttagcatatattattattgctttgttctttaacttgctta
aagaataaaagaaatagaataagcagtggtgttatcttctttggtaatat
tgcttttatttcctttccttaaatggaaacaatactagaaaatggtcact
tctgctgctgttttgaaacttcttcttggcactgtgaatgcatggagtcc
acatggtttcatctgaaatagtaagagaacacttagcctgggctgaaaca
cattgtgaatggtgtcttaatagttactacacagtagaaccctttctagg
tctattacaatctagctgtatacctttgaaattcatgttttacagcctta
attcccagtgtgtagcattaggagataaaacctttggaagatagttagag
gtatttaagcttattaggaagggacccttattatggcattagttccctta
tgagaaaagacagtatagggcttgctctcattctctttccacagagatat
aatgagaaggtattaatctacaagctagcaaaaggattttaccagggaca
gaactatatagaaatttgaccctgaactattaagcttataagactgtgag
aaagaagtgtttgcagcttaaataactcactctaatatatatatattaca
tatatatagatagatagatagatacatatatatgcatatatagatacata
caaaatatatatgtataatatatagtaataatatataatatgtatatatg
tatatacatacatcagtcatatgggttcctgccattctggcaaattctct
gcagggctaggcatagaactgcccaatcactgataccccctcttggtact
cccacaatcctctgtaaacccgctccctttctttctgaaagggtagaggg
ccccttggctaacctgatattctgaaaatcaagtttcttgcagacagtta
gcaattcattgctcaccaggatcagaaacaggaagtcaagctagggagaa
catatcgcacaccaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_118301458_118302623
seq2: B6Ng01-234K15.g_62_1228

seq1  GAATTCCAAAGGCTCTTGCCTTGTGTGCCAATCTTTCATCAATCGGTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGCTCTTGCCTTGTGTGCCAATCTTTCATCAATCGGTGCT  50

seq1  GGGTAATAATTGTTATTCTCCTTTATAAACATTTCATATCAATTATAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAATAATTGTTATTCTCCTTTATAAACATTTCATATCAATTATAAGT  100

seq1  GTTTTCCATGTGGTATTATTTTTAATTCCTAATGTAAAAAAGAACAGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCATGTGGTATTATTTTTAATTCCTAATGTAAAAAAGAACAGCTA  150

seq1  TTATAATATCTTAGCATATATTATTATTGCTTTGTTCTTTAACTTGCTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATATCTTAGCATATATTATTATTGCTTTGTTCTTTAACTTGCTTA  200

seq1  AAGAATAAAAGAAATAGAATAAGCAGTGGTGTTATCTTCTTTGGTAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATAAAAGAAATAGAATAAGCAGTGGTGTTATCTTCTTTGGTAATAT  250

seq1  TGCTTTTATTTCCTTTCCTTAAATGGAAACAATACTAGAAAATGGTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTATTTCCTTTCCTTAAATGGAAACAATACTAGAAAATGGTCACT  300

seq1  TCTGCTGCTGTTTTGAAACTTCTTCTTGGCACTGTGAATGCATGGAGTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTGCTGTTTTGAAACTTCTTCTTGGCACTGTGAATGCATGGAGTCC  350

seq1  ACATGGTTTCATCTGAAATAGTAAGAGAACACTTAGCCTGGGCTGAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTTTCATCTGAAATAGTAAGAGAACACTTAGCCTGGGCTGAAACA  400

seq1  CATTGTGAATGGTGTCTTAATAGTTACTACACAGTAGAACCCTTTCTAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTGAATGGTGTCTTAATAGTTACTACACAGTAGAACCCTTTCTAGG  450

seq1  TCTATTACAATCTAGCTGTATACCTTTGAAATTCATGTTTTACAGCCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTACAATCTAGCTGTATACCTTTGAAATTCATGTTTTACAGCCTTA  500

seq1  ATTCCCAGTGTGTAGCATTAGGAGATAAAACCTTTGGAAGATAGTTAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGTGTGTAGCATTAGGAGATAAAACCTTTGGAAGATAGTTAGAG  550

seq1  GTATTTAAGCTTATTAGGAAGGGACCCTTATTATGGCATTAGTTCCCTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTAAGCTTATTAGGAAGGGACCCTTATTATGGCATTAGTTCCCTTA  600

seq1  TGAGAAAAGACAGTATAGGGCTTGCTCTCATTCTCTTTCCACAGAGATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAAAGACAGTATAGGGCTTGCTCTCATTCTCTTTCCACAGAGATAT  650

seq1  AATGAGAAGGTATTAATCTACAAGCTAGCAAAAGGATTTTACCAGGGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAGGTATTAATCTACAAGCTAGCAAAAGGATTTTACCAGGGACA  700

seq1  GAACTATATAGAAATTTGACCCTGAACTATTAAGCTTATAAGACTGTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATATAGAAATTTGACCCTGAACTATTAAGCTTATAAGACTGTGAG  750

seq1  AAAGAAGTGTTTGCAGCTTAAATAACTCACTCTAATATATATATATTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGTGTTTGCAGCTTAAATAACTCACTCTAATATATATATATTACA  800

seq1  TATATATAGATAGATAGATAGATACATATATATGCATATATAGATACATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAGATAGATAGATAGATACATATATATGCATATATAGATACATA  850

seq1  CAAAATATATATGTATAATATATAGTAATAATATATAATATGTATATATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATATATATGTATAATATATAGTAATAATATATAATATGTATATATG  900

seq1  TATATACATACATCAGTCATATGGGTTCCTGCCATTCTGGCAAATTCTCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATACATCAGTCATATGGGTTCCTGCCATTCTGGCAAATTCTCT  950

seq1  GCAGGGCTAGGCATAGAACTGCCCAATCACTGATA-CCCCTCTTGGTACT  999
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GCAGGGCTAGGCATAGAACTGCCCAATCACTGATACCCCCTCTTGGTACT  1000

seq1  CCCACAATTCCTCTGTAAACCCGCTCCCTTTCTTTTCTGAGAGGGTAGAG  1049
      ||||||| |||||||||||||||||||||||| ||||||| |||||||||
seq2  CCCACAA-TCCTCTGTAAACCCGCTCCCTTTC-TTTCTGAAAGGGTAGAG  1048

seq1  GGCCCCCTTGGCT-ACCTGATATCCTGGAAAATCAAGTTTC-TGCAGCAG  1097
      || |||||||||| ||||||||| || |||||||||||||| |||||   
seq2  GG-CCCCTTGGCTAACCTGATATTCT-GAAAATCAAGTTTCTTGCAGACA  1096

seq1  GTTAGGCATATCATTTCTCACCAGGGTCAG--ACAGGACAGCCCAGCTA-  1144
      |||| |||  ||||| ||||||||| ||||  |||||| || | ||||| 
seq2  GTTA-GCAATTCATTGCTCACCAGGATCAGAAACAGGA-AGTCAAGCTAG  1144

seq1  GGAGAACATATCGCACA-CAGGC  1166
      ||||||||||||||||| |||||
seq2  GGAGAACATATCGCACACCAGGC  1167