MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-234O06
Chromosome	3 (Build37)
Map Location	144,246,213 - 144,247,300
singlet/doublet	singlet
Overlap gene	Sep15
Upstream gene	EG668889, EG621809, LOC100039938, LOC100039952, Lmo4, LOC545572, Hs2st1
Downstream gene	LOC435761, Sh3glb1, LOC668890, Clca1, Clca2, Clca4, EG622139, AI747448, Clca6, Clca3, Clca5, Odf2l, Col24a1, 2410019A14Rik
Link	Open Mouse BAC browser

Click to get alignment info.

name	EG668889 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:668889 MGI:3646900
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	EG621809 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:621809 MGI:3645891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	LOC100039938 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039938
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC100039952 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	Lmo4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16911 MGI:109360
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC545572 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 8 Proteins pseudo : _no_value

name	Hs2st1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23908 MGI:1346049
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sep15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93684 MGI:1927947
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC435761 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:435761
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Sh3glb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54673 MGI:1859730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668890 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 107 ESTs, 1 Protein pseudo : _no_value

name	Clca1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12722 MGI:1316732
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clca2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:80797 MGI:1931471
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clca4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229927 MGI:2181989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG622139 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622139 MGI:3643218
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	AI747448 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99709 MGI:2139790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clca6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:99663 MGI:2139744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clca3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23844 MGI:1346342
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clca5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229933 MGI:2139758
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Odf2l (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:52184 MGI:1098600
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col24a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71355 MGI:1918605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2410019A14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:229937 MGI:1916996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG668889 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369953 GeneID:668889 MGI:3646900
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG668889 transcript_id : XM_001004309.1

name	EG621809 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369955 GeneID:621809 MGI:3645891
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG621809 transcript_id : XM_896651.2

name	LOC100039952 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251975 GeneID:100039952
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to reproductive homeobox on X chromosome 8 transcript_id : XM_001473836.1

name	Lmo4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33636769 GeneID:16911 MGI:109360
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain only 4 transcript_id : NM_010723.2

name	Hs2st1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542964 GeneID:23908 MGI:1346049
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heparan sulfate 2-O-sulfotransferase 1 transcript_id : NM_011828.2

name	Sep15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110825968 GeneID:93684 MGI:1927947
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : selenoprotein transcript_id : NM_053102.2

name	Sh3glb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130734 GeneID:54673 MGI:1859730
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-domain GRB2-like B1 (endophilin) transcript_id : NM_019464.2

name	Clca1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129834 GeneID:12722 MGI:1316732
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride channel calcium activated 1 transcript_id : NM_009899.3

name	Clca2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:34328332 GeneID:80797 MGI:1931471
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride channel calcium activated 2 transcript_id : NM_030601.2

name	Clca4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:20982842 GeneID:229927 MGI:2181989
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride channel calcium activated 4 transcript_id : NM_139148.1

name	EG622139 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85986614 GeneID:622139 MGI:3643218
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG622139 transcript_id : NM_001039222.1

name	AI747448 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802748 GeneID:99709 MGI:2139790
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI747448 transcript_id : NM_001033199.2

name	Clca6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110556624 GeneID:99663 MGI:2139744
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride channel calcium activated 6 transcript_id : NM_207208.3

name	Clca3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:8567335 GeneID:23844 MGI:1346342
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride channel calcium activated 3 transcript_id : NM_017474.1

name	Clca5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142361895 GeneID:229933 MGI:2139758
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chloride channel calcium activated 5 transcript_id : NM_178697.4

name	Odf2l (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388563 GeneID:52184 MGI:1098600
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : outer dense fiber of sperm tails 2-like transcript_id : NM_025714.2

name	Col24a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116326000 GeneID:71355 MGI:1918605
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XXIV, alpha 1 transcript_id : NM_027770.2

name	2410019A14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487365 GeneID:229937 MGI:1916996
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2410019A14 gene transcript_id : NM_001081094.1

name	EG668889 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369954 GeneID:668889 MGI:3646900
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001004309.1

name	EG621809 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82891818 GeneID:621809 MGI:3645891
definition	codon_start : 1 product : hypothetical protein protein_id : XP_901744.1

name	LOC100039952 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251976 GeneID:100039952
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473886.1

name	Lmo4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754560 GeneID:16911 MGI:109360
definition	GO_component : GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0001843 - neural tube closure [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : ethanol induced 4; LIM only 4 product : LIM domain only 4 protein_id : NP_034853.1

name	Hs2st1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542965 CCDS:CCDS17883.1 GeneID:23908 MGI:1346049
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004394 - heparan sulfate 2-O-sulfotransferase activity [Evidence IMP]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0015014 - heparan sulfate proteoglycan biosynthesis, polysaccharide chain biosynthesis [Evidence IMP]; GO:0030202 - heparin metabolism [Evidence IMP] codon_start : 1 exception : mismatches in translation product : heparan sulfate 2-O-sulfotransferase 1 protein_id : NP_035958.2

name	Sep15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716395 CCDS:CCDS17884.1 GeneID:93684 MGI:1927947
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0005788 - endoplasmic reticulum lumen [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0008430 - selenium binding [Evidence ISS] [Evidence IDA] GO_process : GO:0051084 - posttranslational protein folding [Evidence TAS] codon_start : 1 note : 15 kDa selenoprotein product : 15 kDa selenoprotein precursor protein_id : NP_444332.1 transl_except : (pos:144253609..144253611,aa:Sec)

name	Sh3glb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9507097 CCDS:CCDS17885.1 GeneID:54673 MGI:1859730
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005829 - cytosol [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence IC]; GO:0016020 - membrane [Evidence IDA]; GO:0005792 - microsome [Evidence IDA]; GO:0005740 - mitochondrial envelope [Evidence ISS] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0005504 - fatty acid binding [Evidence IDA]; GO:0008289 - lipid binding [Evidence IEA]; GO:0042171 - lysophosphatidic acid acyltransferase activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0008632 - apoptotic program [Evidence ISS]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0006654 - phosphatidic acid biosynthesis [Evidence IDA]; GO:0008654 - phospholipid biosynthesis [Evidence IDA]; GO:0051084 - posttranslational protein folding [Evidence IDA]; GO:0001844 - protein insertion into mitochondrial membrane during induction of apoptosis [Evidence IMP] codon_start : 1 note : endophilin B1 product : SH3-domain GRB2-like B1 protein_id : NP_062337.1

name	Clca1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32964827 CCDS:CCDS17886.1 GeneID:12722 MGI:1316732
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005229 - intracellular calcium activated chloride channel activity [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005247 - voltage-gated chloride channel activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IDA] codon_start : 1 product : chloride channel calcium activated 1 protein_id : NP_034029.2

name	Clca2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13447394 CCDS:CCDS17887.1 GeneID:80797 MGI:1931471
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005229 - intracellular calcium activated chloride channel activity [Evidence ISS]; GO:0005247 - voltage-gated chloride channel activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA]; GO:0006821 - chloride transport [Evidence ISS] [Evidence IEA] codon_start : 1 product : chloride channel calcium activated 2 protein_id : NP_085104.1

name	Clca4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20982843 GeneID:229927 MGI:2181989
definition	codon_start : 1 note : calcium-activated chloride channel CLCA4 product : chloride channel calcium activated 4 protein_id : NP_631887.1

name	EG622139 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85986615 CCDS:CCDS17888.1 GeneID:622139 MGI:3643218
definition	codon_start : 1 product : hypothetical protein LOC622139 protein_id : NP_001034311.1

name	AI747448 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701714 GeneID:99709 MGI:2139790
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005247 - voltage-gated chloride channel activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IEA] codon_start : 1 product : calcium activated chloride channel protein_id : NP_001028371.1

name	Clca6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110556625 GeneID:99663 MGI:2139744
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005254 - chloride channel activity [Evidence IDA] [Evidence IMP]; GO:0015276 - ligand-gated ion channel activity [Evidence IMP]; GO:0005247 - voltage-gated chloride channel activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IMP] codon_start : 1 note : calcium activated chloride channel product : chloride channel calcium activated 6 protein_id : NP_997091.3

name	Clca3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8567336 CCDS:CCDS17889.1 GeneID:23844 MGI:1346342
definition	GO_component : GO:0016021 - integral to membrane [Evidence IDA]; GO:0030141 - secretory granule [Evidence IDA] GO_function : GO:0005254 - chloride channel activity [Evidence ISS]; GO:0005247 - voltage-gated chloride channel activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence ISS] [Evidence IEA] codon_start : 1 note : chloride channel calcium activated 2 product : chloride channel calcium activated 3 protein_id : NP_059502.1

name	Clca5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520101 CCDS:CCDS17890.1 GeneID:229933 MGI:2139758
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005254 - chloride channel activity [Evidence IMP] [Evidence IDA]; GO:0015276 - ligand-gated ion channel activity [Evidence IDA] [Evidence IMP]; GO:0005247 - voltage-gated chloride channel activity [Evidence IEA] GO_process : GO:0006821 - chloride transport [Evidence IMP] codon_start : 1 product : chloride channel calcium activated 5 protein_id : NP_848812.1

name	Odf2l (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385172 CCDS:CCDS17891.1 GeneID:52184 MGI:1098600
definition	codon_start : 1 exception : mismatches in translation product : outer dense fiber of sperm tails 2-like protein_id : NP_079990.1

name	Col24a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116326001 CCDS:CCDS17892.1 GeneID:71355 MGI:1918605
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 note : collagen, type XXIV, alpha 1 product : procollagen, type XXIV, alpha 1 protein_id : NP_082046.2

name	2410019A14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487366 GeneID:229937 MGI:1916996
definition	codon_start : 1 product : hypothetical protein LOC229937 protein_id : NP_001074563.1

name	LOC100039938 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039938
definition	number : 1 pseudo : _no_value

name	LOC100039938 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039938
definition	number : 2 pseudo : _no_value

name	LOC100039938 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039938
definition	number : 3 pseudo : _no_value

name	LOC435761 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:435761
definition	number : 1 pseudo : _no_value

name	LOC545572 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251986 GeneID:545572
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 ESTs, 8 Proteins product : similar to ribosomal protein L21 pseudo : _no_value transcript_id : XR_031829.1

name	LOC668890 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251977 GeneID:668890
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 107 ESTs, 1 Protein product : similar to BCL2/adenovirus E1B 19 kDa-interacting protein 3 pseudo : _no_value transcript_id : XR_031487.1

clone name	MSMg01-324C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439O14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456B22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482C20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-106C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452E23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-506F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-445K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301A24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294M03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-417H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-144B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125H02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-370J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508E02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-509A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503N15
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-110M07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-316A05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-080J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384E23
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-191D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332H10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520P02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-214E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-449E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363B21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537E21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-495G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486D03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-085N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-103B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-259C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-203F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234O06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007D01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221L18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-197J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-213J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-174G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141K02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-234O06.b	B6Ng01-234O06.g
ACC	GA046515	GA046516
length	1,220	1,094
definition	B6Ng01-234O06.b	B6Ng01-234O06.g
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccactgttttttctaaataaaaaactggcttctgggtggaaggca ggtcacgtatcatcttacttagggttccattgctgtgaagagacactatg accacagcaactattgtaaaggacaatatttaattggggctggcttacag cttctgaggttcagtccatgatcatgatgggaagcatggcagcatctagg cagacatggcactggaggagccaagagttctacatcttgatccaaaggca accatgagagactctctccatcacaaaggcataggaccacaaagccaact cctacagtgacacacttcctctgacaaggtcacacctattccaacagggt catacctcctaatagtgccatgtcccatgcccaagcatattcaaatgacc acattccactcactggccccattggcttgttcaaacatatgattctgcgg ggctgtacctagccatagcataatgcaaaatgtattttgtccaacttcaa aagtccacaaagtctatagtgtctcaacaatgttaaaagtccaaaattca aggaacctcttctgggattcttacaatctcttaactgtaatctctaataa aatcaaaatcaaaaagaagatcacatacttccaacatcacaggatataga ttaccattccaaaatctcatagtggggagacactgaagcaaagcaagacc gaaagccagctgagcaaactccaaactctgcatctccatgtctgatgtca cagcgctcttcagatctccaactcctttcatctttgtggactgcaacaca attctttctcttgggctggttccacaccctgagagcagcttttctcagca ggtgtcctgtggactcagcatccctagttttttggagactctgtactggc tagttttgtgtcaacttgacacagctggagttatcacagagaaaggagct tcagttgaggaaatgcctccatgagatccaactgtaaggcattttctcaa ttcgtgatcaagggggaaagccccttgtggggtgggaccatcttctgggc tgtagtcctgggtttttataaagaagagcaagctaagccaagccagtaaa gaacatccctcccatgcctctgccatcagctcctgccttttctgacctgc tggattcagctctgccactcttttgggtgaatccacacacaacgcaaggt aatagtgaagaaagaacatg	gaattcatcagcaggctgtccttgaactcagtttagagatctgcctgcct ctgcctcccaagtactggggttgaagaggtgcaccaccaccaccaccacc cagcctgattttaaaacaagcaacagcaaaaacctggactgcatagccaa actcactaggccagctccattgtaacctacagcctcagcacaaagcctaa tctttagaggacaaacatactttgaaaattgaaattgagttcagttttaa ataaaacactgttttcaaatactttcaaatggcaaaataggtgagaactc tttttttaaaactacaagtgacattttgcacaaaaaaaataaatttaggt ttataatcacaatgcaaaaacaattagtttacaataaaagaagttaaact aatcacaaatttaggtatatgatcacaaagcaaaaataactagttaacaa taaaagaaatcaaactaaccacagtgtctaatttttcttgctatttttta atatacttggtaacagattttagcggtctaagaataatttgaatcccttt tttgtttaaggggagggacatttttgttttgttttgtgacattttgtggt tgtcttttttatgttctttttctcttttctttttgctttcccccctcctt ttgtctcctttccctttcctgtcctggggaccatcccaggtctttgcata aacacacattcaagtattgatctaaatctccagcctcaacagcgactcgg tagagcattgtttaatgagtgacgtgttgtttatttagtcactcatttga aagaagactttactggttaaggtgaggtagagtccttctgtgtgagcttg ggagaaagatctcgttgtggttcgcaactctagtaaaacctcatagccag ctcctgagcctacctgtctcctgtctggaacatagctcagccactcaaaa tgtctgaataaagggctttattttccactttaatatctgtgttagactat atgtaatataggtaaatacgttctgtgaatgtagttgatgtccacttctg tctgccttcactgtgctttgtgaattggactaccttcagctcac
quality values	Open. Hide. 49 31 24 30 62 62 30 18 54 62 62 62 46 37 62 62 62 62 51 51 62 62 62 62 62 62 62 62 62 62 62 62 59 62 49 49 49 62 62 62 62 62 62 62 59 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 49 54 62 59 59 62 62 62 62 59 59 62 59 62 62 62 62 59 62 59 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 59 59 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 62 62 62 49 58 49 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 47 58 58 58 58 58 54 58 58 58 58 58 58 54 46 58 58 54 58 58 54 54 54 58 58 58 58 48 58 58 58 58 58 58 58 58 58 58 45 31 58 53 53 58 58 52 51 58 58 58 58 58 58 53 58 58 48 58 58 51 49 58 58 58 58 58 58 54 58 54 58 58 58 58 48 58 50 58 58 58 58 53 53 58 58 58 58 51 58 58 40 31 28 51 52 51 51 58 51 58 58 58 51 48 37 58 51 46 58 58 50 51 51 37 58 32 39 51 50 51 53 41 41 50 50 47 51 39 47 58 51 38 31 58 58 43 50 53 53 53 52 52 52 50 51 58 49 58 58 58 41 38 26 50 53 52 52 53 54 37 45 46 49 54 40 50 39 52 49 51 27 54 41 38 49 44 41 50 54 39 39 53 51 33 49 17 49 32 54 50 41 51 49 41 31 54 54 45 53 52 52 51 41 37 52 40 52 44 44 30 53 45 51 45 52 39 46 31 53 52 37 37 46 38 45 54 51 52 51 42 45 40 40 32 27 37 35 31 42 34 40 25 53 34 53 28 47 42 49 23 30 35 37 34 40 49 42 32 33 36 31 42 26 32 34 31 39 45 45 32 34 28 47 33 46 33 52 47 31 30 31 35 30 30 43 51 42 30 31 45 51 31 35 31 33 17 32 31 22 33 46 31 42 42 26 32 21 30 31 24 41 46 51 51 32 31 32 31 33 17 33 29 8 33 23 41 30 22 42 31 41 27 32 46 27 23 31 31 32 31 31 28 32 31 48 38 29 37 34 46 48 46 46 46 31 27 29 38 21 31 22 32 27 29 39 31 32 31 34 35 39 30 31 35 24 35 48 48 28 32 27 32 21 20 26 24 31 31 29 21 21 23 17 20 14 31 38 36 31 29 20 18 30 29 17 31 27 14 20 27 21 31 6 25 44 25 12 10 31 17 29 30 32 34 31 12 24 14 26 37 13 24 32 47 31 32 34 14 25 22 21 28 19 28 22 31 14 19 21 28 32 17 20 32 25 20 23 18 19 25 23 18 27 33 48 48 24 21 31 31 15 14 27 32 18 10 18 29 24 22 21 16 6 4 29 34 28 11 13 47 9 5 3 26 30 8 10 8 13 8 12 28 40 5 11 11 40 13 18 7 18 13 19 11 9 20 24 15 14 31 18 8 11 13 3 12 13 8 9 7 17 3 10 14 7 32 34 32 16 5 3 3 21 10 7 24 6 4 8 8 15 6 5 13 4 10 15 21 5 9 5 13 16 6 12 7 12 7 8 9 24 13 9 16 15 10 13 8 10 20 9 21 8 21 11 20 5 17 17 4 5 7 5 7 5 12 8 10 18 20 5 14 11 13 11 5 15 10 7 18 26 23 4 5 6 12 16 6 8 4 8 5 2 5 4 2 2 2 10 5 8 4 9 25 8 16 7 7 20 4 3 4 5 16 13 6 4 17 18 10 23 6 13 5 5 4 5 5 21 9 8 6 6 8 4 3 3 6 4 3 3 3 1 1 4 8 5 5 6 5 4 3 6 26 6 4 16 4 3 6 7 4	Open. Hide. 62 59 43 59 62 44 46 62 59 59 59 59 51 48 49 43 54 62 62 62 62 62 62 62 59 62 62 62 54 59 62 62 62 59 59 62 54 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 59 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 54 33 54 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 49 49 59 62 62 62 42 49 62 59 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 62 62 58 58 58 58 58 58 58 58 58 58 58 58 58 47 58 58 47 58 58 58 58 54 58 58 58 54 58 58 54 58 52 58 58 52 58 58 54 58 58 58 58 54 58 54 47 47 54 54 58 58 58 58 58 49 58 42 44 41 45 58 58 58 54 30 58 58 54 32 58 58 58 58 58 58 58 47 58 58 58 58 49 58 58 58 58 41 58 58 52 50 49 58 58 58 58 53 58 58 54 58 58 52 58 58 58 58 58 58 49 53 51 58 40 58 58 53 58 58 58 54 58 49 58 51 58 58 58 58 58 58 54 54 43 58 46 50 58 58 51 58 58 58 58 58 49 37 58 50 58 58 50 58 50 58 53 58 53 53 58 51 32 58 58 58 58 53 52 58 50 58 39 50 58 41 51 54 58 58 28 16 42 40 51 32 54 39 40 40 58 47 50 58 36 39 51 52 40 47 33 58 50 49 41 52 52 53 38 39 44 47 42 41 41 45 45 35 42 51 35 41 49 39 28 54 54 52 53 53 52 52 27 37 35 54 50 37 29 53 42 53 31 41 36 30 35 44 42 35 35 33 52 30 33 23 52 37 40 46 51 51 49 33 41 51 40 53 45 31 52 40 33 29 37 35 54 30 51 42 37 54 47 42 34 49 29 32 22 33 52 30 39 53 40 34 28 49 41 32 39 51 33 21 41 40 24 47 23 32 47 34 26 34 29 53 53 32 34 31 30 23 46 15 29 33 11 51 18 31 26 43 28 45 39 43 30 17 26 30 45 31 35 30 28 38 21 32 31 33 46 46 26 42 19 46 46 34 29 26 21 31 36 33 31 27 28 40 31 38 38 24 23 34 31 31 23 26 30 30 31 37 33 31 30 34 37 39 29 16 31 31 28 24 31 31 12 27 24 21 25 32 43 32 32 24 30 32 11 28 16 30 33 26 37 24 37 31 32 26 22 31 25 38 25 27 20 21 15 38 27 16 8 8 17 16 29 36 32 29 6 16 11 21 23 27 19 11 41 48 26 30 31 24 17 22 25 33 19 16 16 16 13 16 37 25 16 32 48 19 19 24 43 43 7 5 5 6 13 29 39 13 4 5 9 16 22 10 6 6 5 9 7 8 14 18 33 22 27 20 7 5 9 4 5 6 9 8 9 21 26 15 5 7 23 34 15 10 18 28 13 28 10 11 11 18 8 9 18 12 21 21 13 20 8 15 11 17 13 3 4 5 25 7 5 5 8 19 7 5 13 4 6 6 14 11 15 20 22 16 20 27 14 21 10 28 25 30 19 3 11 7 14 11 11 13 5 14 14 21 14 10 22 7 6 21 16 20 15 13 22 19 8 4 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_144246213_144247300
seq2: B6Ng01-234O06.g_66_1159

seq1  GAATTCATCAGCAGGCTGTCCTTGAACTCAGTTTAGAGATCTGCCTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGCAGGCTGTCCTTGAACTCAGTTTAGAGATCTGCCTGCCT  50

seq1  CTGCCTCCCAAGTACTGGGGTTGAAGAGGTGCACCACCACCACCACCACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCCAAGTACTGGGGTTGAAGAGGTGCACCACCACCACCACCACC  100

seq1  CAGCCTGATTTTAAAACAAGCAACAGCAAAAACCTGGACTGCATAGCCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGATTTTAAAACAAGCAACAGCAAAAACCTGGACTGCATAGCCAA  150

seq1  ACTCACTAGGCCAGCTCCATTGTAACCTACAGCCTCAGCACAAAGCCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTAGGCCAGCTCCATTGTAACCTACAGCCTCAGCACAAAGCCTAA  200

seq1  TCTTTAGAGGACAAACATACTTTGAAAATTGAAATTGAGTTCAGTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAGAGGACAAACATACTTTGAAAATTGAAATTGAGTTCAGTTTTAA  250

seq1  ATAAAACACTGTTTTCAAATACTTTCAAATGGCAAAATAGGTGAGAACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAACACTGTTTTCAAATACTTTCAAATGGCAAAATAGGTGAGAACTC  300

seq1  TTTTTTTAAAACTACAAGTGACATTTTGCACAAAAAAAATAAATTTAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTAAAACTACAAGTGACATTTTGCACAAAAAAAATAAATTTAGGT  350

seq1  TTATAATCACAATGCAAAAACAATTAGTTTACAATAAAAGAAGTTAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATCACAATGCAAAAACAATTAGTTTACAATAAAAGAAGTTAAACT  400

seq1  AATCACAAATTTAGGTATATGATCACAAAGCAAAAATAACTAGTTAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAAATTTAGGTATATGATCACAAAGCAAAAATAACTAGTTAACAA  450

seq1  TAAAAGAAATCAAACTAACCACAGTGTCTAATTTTTCTTGCTATTTTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAATCAAACTAACCACAGTGTCTAATTTTTCTTGCTATTTTTTA  500

seq1  ATATACTTGGTAACAGATTTTAGCGGTCTAAGAATAATTTGAATCCCTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTTGGTAACAGATTTTAGCGGTCTAAGAATAATTTGAATCCCTTT  550

seq1  TTTGTTTAAGGGGAGGGACATTTTTGTTTTGTTTTGTGACATTTTGTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAAGGGGAGGGACATTTTTGTTTTGTTTTGTGACATTTTGTGGT  600

seq1  TGTCTTTTTTATGTTCTTTTTCTCTTTTCTTTTTGCTTTCCCCCCTCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTTATGTTCTTTTTCTCTTTTCTTTTTGCTTTCCCCCCTCCTT  650

seq1  TTGTCTCCTTTCCCTTTCCTGTCCTGGGGACCATCCCAGGTCTTTGCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTCCTTTCCCTTTCCTGTCCTGGGGACCATCCCAGGTCTTTGCATA  700

seq1  AACACACATTCAAGTATTGATCTAAATCTCCAGCCTCAACAGCGACTCGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACATTCAAGTATTGATCTAAATCTCCAGCCTCAACAGCGACTCGG  750

seq1  TAGAGCATTGTTTAATGAGTGACGTGTTGTTTATTTAGTCACTCATTTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCATTGTTTAATGAGTGACGTGTTGTTTATTTAGTCACTCATTTGA  800

seq1  AAGAAGACTTTACTGGTTAAGGTGAGGTAGAGTCCTTCTGTGTGAGCTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGACTTTACTGGTTAAGGTGAGGTAGAGTCCTTCTGTGTGAGCTTG  850

seq1  GGAGAAAGATCTCGTTGTGGTTCGCAACTCTAGTAAAACCTCATAGCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAGATCTCGTTGTGGTTCGCAACTCTAGTAAAACCTCATAGCCAG  900

seq1  CTCCTGAGCCTACCTGTCTCCTGTCTGGAACATAGCTCAGCCACTC-AAA  949
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CTCCTGAGCCTACCTGTCTCCTGTCTGGAACATAGCTCAGCCACTCAAAA  950

seq1  TGTCTG-ATAAAGGGCTTTATTTT-CACTTTAATATCTGTG-TAGACTAT  996
      |||||| ||||||||||||||||| |||||||||||||||| ||||||||
seq2  TGTCTGAATAAAGGGCTTTATTTTCCACTTTAATATCTGTGTTAGACTAT  1000

seq1  ATTGTATATA-GTAAATACG-TCTGTGAATGTAGTTGAATGTCCACTTCT  1044
      ||   ||||| ||||||||| |||||||||||||||| ||||||||||||
seq2  ATGTAATATAGGTAAATACGTTCTGTGAATGTAGTTG-ATGTCCACTTCT  1049

seq1  GTCTG-CTTCACTGTGCTTTTGTG-ATTGGACTAACTTCAGCTCAC  1088
      ||||| ||||||||||| |||||| ||||||||| |||||||||||
seq2  GTCTGCCTTCACTGTGC-TTTGTGAATTGGACTACCTTCAGCTCAC  1094

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information