BAC Information

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BAC

Clone NameB6Ng01-235N08
Chromosome3 (Build37)
Map Location 17,993,441 - 17,994,062
singlet/doubletsinglet
Overlap geneCyp7b1
Upstream geneLOC100040059, EG383936, LOC622737, ENSMUSG00000074674, LOC100040120, Cypt12, LOC545508, Bhlhb5
Downstream geneLOC622921, LOC100040153
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235N08.bB6Ng01-235N08.g
ACCGA047209GA047210
length1,0361,191
definitionB6Ng01-235N08.b B6Ng01-235N08.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaggttttatttttccatatatccaggtaattaccctttcatgt
taagaatgagaagatcaaaaaataatgcaaatgaattccaaagactatgt
ttgtagtcttcacataattattactcttaacaatttgcttgaaattcatc
aactctctgtttattgctagcaagcaactgtttgttattgaaataaaaag
gttgtgtttaaagtgcactgttaagaaagaaatgcttagatttttgtctt
agtccactttgtattcctgcacaaaatatcataccaagaagcaagtttgg
gatgaaaggatttattcagcttgcacttccaaactgcttttcaccaccaa
aggaagtcaggactggaactcaagcatgtcaggaagcaggcgctggtgca
gaggccatggagagatgctgcttcctggattgctttcctggcttgctcag
cttgccttctcatagaagccaggactacttgtcctgggatggcaccactc
acaatgagcccttccacccttgatcactaattgagaaaatgccttacaga
tggttttcatggaggcatttcctcaagggaagctccttttttgtgataac
tccagcttatgtcacattgacacacaaaacaagtcagtacagatttattg
aaccagaagaaatgtcaagttctgaacttgtaattttggtctatgaaggt
caacagctagacttagggactcttatcttggagccctcacagctctcccg
tgcttacccaatgtatagaaacaacaaatgttttatatgtaattctactc
ttatacattacatcccctccctccattcctcacagtctctcaacccctgc
aaccttccctttcctccatttgtcttcataaaagaggctgaccttacagg
gcatcagccaaatgtggcagagtaagatgcagtgagactacacacaaacc
ctcaaatccaagctgcattagacaactttactaataagaaaatagtccca
caatcaggccaaaagaagtcagaaaatatcccgatt

gaattctttgtttagctctttgccccatttttaataaggttatttgatgc
tctggagtctatcttcttgaattctttgtatatattggatattattagcc
ttttattggatgtagaattgggaagattgtttcccaatctgttggttgcc
tttttgtcctattgacagtgttctttgacttacagaagctttgcaatgtg
aggtcccatttgtcgattctcaatcttacagcacaagccattgctgctct
gttcaggaattttccctctgtgaccatcatatcttcgaggattttcccca
ctttctcctctataagtttcagtatctctggttttatttggagtttcttg
atccatttagacttgagcttagtacaaggagacaagaatggatcaattta
cattcctctacatgctaaccgccagttgtgccagcaccacttgttgaaaa
tgctgtcttttttccactggatggttttagctcctttgtcaaagatcaag
ttaccttaggtgtgtgggttcatttctgggtctttgtttctattcctttt
atctacctatcttcctctgtaccaataccatacagtttttatcactattt
ctctgtaatatatcttgaggtcagggatggtgagtccctcagaagttctt
atattgttgagaatagtttttgttatcctggatttttttgctattccaaa
tgaatttgcaaattgcttttaaagcatttgacaaaattcagcatctcttc
atctcttcatgttaaaagtcttggaaagatcaggaattcaatgcccatac
ctaaacattgtgaaagcaatatacagcaaaccagttgccaacatcaaact
aaatggagagaaacttgaagcaatttcactaaactcagggactagaaaag
gctgcccactttctccctatctattcaatatagtacttgaaattctacct
tagagcaattagacacaaaggagttaaagggatacaaaaggaaaggaaga
agtcaaatatcactatttgcagatgatatgatcatgtattaatgaccaca
aagtctgccaacaggactctaaccctgataaacaccttcagctaaatgga
tataaagctaactcaaacaaatcagtagccttcccttactcaggaataac
caagtctagcaagaaatttgagagatggaaccaccctcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_17993441_17994062
seq2: B6Ng01-235N08.b_47_668 (reverse)

seq1  TGTCAATGTGACATAAGCTGGAGTTATCACAAAAAAGGAGCTTCCCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATGTGACATAAGCTGGAGTTATCACAAAAAAGGAGCTTCCCTTGA  50

seq1  GGAAATGCCTCCATGAAAACCATCTGTAAGGCATTTTCTCAATTAGTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCCTCCATGAAAACCATCTGTAAGGCATTTTCTCAATTAGTGAT  100

seq1  CAAGGGTGGAAGGGCTCATTGTGAGTGGTGCCATCCCAGGACAAGTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTGGAAGGGCTCATTGTGAGTGGTGCCATCCCAGGACAAGTAGTC  150

seq1  CTGGCTTCTATGAGAAGGCAAGCTGAGCAAGCCAGGAAAGCAATCCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTCTATGAGAAGGCAAGCTGAGCAAGCCAGGAAAGCAATCCAGGA  200

seq1  AGCAGCATCTCTCCATGGCCTCTGCACCAGCGCCTGCTTCCTGACATGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCATCTCTCCATGGCCTCTGCACCAGCGCCTGCTTCCTGACATGCT  250

seq1  TGAGTTCCAGTCCTGACTTCCTTTGGTGGTGAAAAGCAGTTTGGAAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTCCAGTCCTGACTTCCTTTGGTGGTGAAAAGCAGTTTGGAAGTGC  300

seq1  AAGCTGAATAAATCCTTTCATCCCAAACTTGCTTCTTGGTATGATATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAATAAATCCTTTCATCCCAAACTTGCTTCTTGGTATGATATTTT  350

seq1  GTGCAGGAATACAAAGTGGACTAAGACAAAAATCTAAGCATTTCTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGGAATACAAAGTGGACTAAGACAAAAATCTAAGCATTTCTTTCTT  400

seq1  AACAGTGCACTTTAAACACAACCTTTTTATTTCAATAACAAACAGTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGCACTTTAAACACAACCTTTTTATTTCAATAACAAACAGTTGCT  450

seq1  TGCTAGCAATAAACAGAGAGTTGATGAATTTCAAGCAAATTGTTAAGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCAATAAACAGAGAGTTGATGAATTTCAAGCAAATTGTTAAGAGT  500

seq1  AATAATTATGTGAAGACTACAAACATAGTCTTTGGAATTCATTTGCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTATGTGAAGACTACAAACATAGTCTTTGGAATTCATTTGCATTA  550

seq1  TTTTTTGATCTTCTCATTCTTAACATGAAAGGGTAATTACCTGGATATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGATCTTCTCATTCTTAACATGAAAGGGTAATTACCTGGATATAT  600

seq1  GGAAAAATAAAACCTAGAATTC  622
      ||||||||||||||||||||||
seq2  GGAAAAATAAAACCTAGAATTC  622


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