BAC Information

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BAC

Clone NameB6Ng01-235N10
Chromosome3 (Build37)
Map Location 77,818,576 - 77,819,144
singlet/doubletsinglet
Overlap genenone
Upstream geneDnmt3a-ps1, EG626461
Downstream geneLOC667526, LOC626479, LOC100041691, LOC383883, LOC100041748, LOC100041716, LOC100041725, LOC100041766
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235N10.bB6Ng01-235N10.g
ACCGA047213GA047214
length1,0391,168
definitionB6Ng01-235N10.b B6Ng01-235N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatttgcctactggttcacgtgcagatgaatttatatgttgtaa
gaaaaatcaatgatacatttggaagctgcatttcaactgaaagaaacaag
gccataacctgggaggcaagatttatagtaataaagtaccaagcttaatc
ttcagttttccctttggcttagtggataagaatatttaaatgtgctgaaa
atatcacttcttggtagggatattgcatctgattcctcatgcttccacga
acaaataaaatcatgaaatttaatgcttcacttgttgcaaatcagcatat
cagcacattgtttgactctccaagttctagaaataaaagggtaaaactaa
tttcctaaaaggattttatcaacctgctttttctatgtggatttaactgg
actcttgtttgaaagcatttttctcttgtcttctgtctgctttactttga
ttaatcagtgtggctgtgacctctttcagcttaccgtcaaacgtttcaga
tacatgcatcacacagagcagcagagttagaaattcactatgtaacaatt
aaaactatctgtggaacgacccctcctattttttcttctgatagagatcc
atttctgccctcttgtcccttactctgtacgtaattgttgtgtttataca
gattatgtcctttttactgggaacttaagagcaaacatcaacatataaga
ttacataccaaacttctctttgggagtctggatcactcactgtttgtgat
ggtttgtatatccttggaccagggagtagcgccatctgaaggtgtggcct
tgttggaataggtgtgacctggttggaatgggtgtgtcactctgggtgtg
ggtctgagatcctcaccctagttgcctggaagtcagtcttccactagcag
tctttggatgaagacatagaactctcagtcgtcctgcaccatacctgcct
ggataactgccatgctcccactcattgataatgaattgaactctgaacct
gtagccagccccaattaaatgtgtttttttatagacttg

gaattctcacgtgaggaataccaaatggctgagaaggacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagac
tccacctcatagcagtcagaatggctaagatcaaaaattcaggtgacagt
agatgctggcgaggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaagcttatacaaccactctagaaatcagtctggtgtttcctca
gaaaattggacatagtactattggacaatcccgcaatacctctcctgggc
ttatatccagagcatgttccaactagtaagaaggacacatgctccactat
gttcatagcaaccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattccttggcaa
atggatggacctggagggcatcatcctgagtgaggtaactcaatcccaaa
agaactcacacaatatgtacttactgataagtggatattagcccagaaac
ttagaatacccaagatataagatacaatttggtaaacacatgaaactcaa
aaagaacaaataccaaagtgtggacactttgcccctcttagaattgggaa
caaaacacccatggaaggagttacagagacagagtttggagctgagagga
aaggatggaccatctagagactgctatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttgctgaaa
agacccagatatagctgtctcttgtgagactatgccggggccctagcaaa
cacagaagtggatcctcacagtcagctattggatgggatcacagggcccc
caatggagagcaagagaaaatatccatggagctaaatggatctgcaaccc
tatagttgacacatatgactaccagtacccccagagctggtgtctctagc
tgtttatgtatcagagatgctagtagcatcagtgaaaagaatagccattg
tcatgcaacttaaattgctcagtacaggtatgcaagtcagagtggaatgg
gtgtgtgtgctataaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_77818576_77819144
seq2: B6Ng01-235N10.b_48_616 (reverse)

seq1  TCGTTCCACAGATAGTTTTAATTGTTACATAGTGAATTTCTAACTCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCCACAGATAGTTTTAATTGTTACATAGTGAATTTCTAACTCTGCT  50

seq1  GCTCTGTGTGATGCATGTATCTGAAACGTTTGACGGTAAGCTGAAAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTGTGTGATGCATGTATCTGAAACGTTTGACGGTAAGCTGAAAGAGG  100

seq1  TCACAGCCACACTGATTAATCAAAGTAAAGCAGACAGAAGACAAGAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGCCACACTGATTAATCAAAGTAAAGCAGACAGAAGACAAGAGAAA  150

seq1  AATGCTTTCAAACAAGAGTCCAGTTAAATCCACATAGAAAAAGCAGGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTTTCAAACAAGAGTCCAGTTAAATCCACATAGAAAAAGCAGGTTG  200

seq1  ATAAAATCCTTTTAGGAAATTAGTTTTACCCTTTTATTTCTAGAACTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATCCTTTTAGGAAATTAGTTTTACCCTTTTATTTCTAGAACTTGG  250

seq1  AGAGTCAAACAATGTGCTGATATGCTGATTTGCAACAAGTGAAGCATTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAAACAATGTGCTGATATGCTGATTTGCAACAAGTGAAGCATTAA  300

seq1  ATTTCATGATTTTATTTGTTCGTGGAAGCATGAGGAATCAGATGCAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATGATTTTATTTGTTCGTGGAAGCATGAGGAATCAGATGCAATAT  350

seq1  CCCTACCAAGAAGTGATATTTTCAGCACATTTAAATATTCTTATCCACTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACCAAGAAGTGATATTTTCAGCACATTTAAATATTCTTATCCACTA  400

seq1  AGCCAAAGGGAAAACTGAAGATTAAGCTTGGTACTTTATTACTATAAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAAGGGAAAACTGAAGATTAAGCTTGGTACTTTATTACTATAAATC  450

seq1  TTGCCTCCCAGGTTATGGCCTTGTTTCTTTCAGTTGAAATGCAGCTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCCCAGGTTATGGCCTTGTTTCTTTCAGTTGAAATGCAGCTTCCA  500

seq1  AATGTATCATTGATTTTTCTTACAACATATAAATTCATCTGCACGTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATCATTGATTTTTCTTACAACATATAAATTCATCTGCACGTGAAC  550

seq1  CAGTAGGCAAATGGAATTC  569
      |||||||||||||||||||
seq2  CAGTAGGCAAATGGAATTC  569


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