BAC Information

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BAC

Clone NameB6Ng01-237A02
Chromosome3 (Build37)
Map Location 34,645,567 - 34,646,018
singlet/doubletsinglet
Overlap genenone
Upstream geneTtc14, Ccdc39, LOC100040232, LOC100041072, Fxr1h, Dnajc19, LOC435727, EG665636, EG622074, Sox2, LOC100041108
Downstream geneLOC665655, Ube2l3-ps1, LOC625963
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237A02.bB6Ng01-237A02.g
ACCGA048079GA048080
length4521,165
definitionB6Ng01-237A02.b B6Ng01-237A02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacacatattccacctctgcctcccaagtgttgagattaaaggtg
tgctccatatatcctaatgttaactattgtagcacttttcaaaagcttct
aaaatgggtacattattaacccttaaaaacaaaggaaaggctgagagtgt
agctcagtattagaacatccatgcccaaaatgtatgacactagattcggt
ctcccacagcacggaaggtcaggtctgatggtacatgcctgtaatctgat
cccaccatgggcaggtgggatcaggagaatcagaagttcaaaaaaggcta
agaagtttgaaagtttgaagtcagtttaggctatatgagctgtttcaaaa
aaataaaactaaaataaaaaaattttttaaaaagagagaggaaggaagga
gaaaaaaaaagagggacttgggaggtgagtggaggagtgagttgaggtgg
cg
gaattcagtaccaagataaaaatactgaagaaagctcaggctgaaatgga
agtggaattgaaaaactcaccctaattaactcttcagaacagagaaaagc
tataggtaccaataggatgggtcagtagaaagtagaatgtcggaacttga
tgataaataaaagaactcaaacaaactattttaaaagttgtgaaaggaag
atataggaatagcaagaaactccaaaataccaaacctttgaataatagac
ctaaaaagaggaaaatcctaggtcaatggcttagatcatttcttcaacag
aaccatgaaaggaaatgtccctgttttaaggaaagatatatccatataga
tgcaagaagcatcagaataccaaataaccaagggcagaaaggaaattcct
cacagtgcatcattattaaagcactaaatatacagaacaaatagaagata
ctccaagcagcaagagaaaaagcacaaatcacagataaaggaaaacccgt
caggatagcagctgattgctcaatggaagctttaaaagccagaagagccg
gaagccatgtacttcaagttttaaatggaccacaaatgccaacctagtgt
actttacccagcaaaactatctgccataactgaaggagaaagaaagcatc
tcatgatataaacagggcaaaagaattcgtgttcaccaaatcagcccttc
agagaatactggaagcgatgctttggactgaagagaagaagtacagccaa
gagactgtaggaagcaaacaaatgaagctataattatagaaacagaaaat
aggacaaaatacagcaaaaaagcaacacaatgacaggcagcaagcaaccc
acatctctcaaataagaactctaaatatcaatggtgcccattcccgtgtc
aaagggcactgggtttgattaaagagttggggaaacaaaattcatcttgg
ttgcagagatgactcggacattaaaaggcactggtcacacaacaacacaa
gcaaatagatgtgtgtgtgtgtatgcacaagaaactattcttagattcag
catcatgcaccaagagtaaaggaagaaaaaacatgtccatgtatgggacc
catgagcaggtcacatctattgacaaatagacctccaaggcctgaagtta
atcccggaaggagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_34645567_34646018
seq2: B6Ng01-237A02.b_35_486

seq1  GAATTCACACATATTCCACCTCTGCCTCCCAAGTGTTGAGATTAAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACATATTCCACCTCTGCCTCCCAAGTGTTGAGATTAAAGGTG  50

seq1  TGCTCCATATATCCTAATGTTAACTATTGTAGCACTTTTCAAAAGCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCATATATCCTAATGTTAACTATTGTAGCACTTTTCAAAAGCTTCT  100

seq1  AAAATGGGTACATTATTAACCCTTAAAAACAAAGGAAAGGCTGAGAGTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGGTACATTATTAACCCTTAAAAACAAAGGAAAGGCTGAGAGTGT  150

seq1  AGCTCAGTATTAGAACATCCATGCCCAAAATGTATGACACTAGATTCGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGTATTAGAACATCCATGCCCAAAATGTATGACACTAGATTCGGT  200

seq1  CTCCCACAGCACGGAAGGTCAGGTCTGATGGTACATGCCTGTAATCTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCACAGCACGGAAGGTCAGGTCTGATGGTACATGCCTGTAATCTGAT  250

seq1  CCCACCATGGGCAGGTGGGATCAGGAGAATCAGAAGTTCAAAAAAGGCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCATGGGCAGGTGGGATCAGGAGAATCAGAAGTTCAAAAAAGGCTA  300

seq1  AGAAGTTTGAAAGTTTGAAGTCAGTTTAGGCTATATGAGCTGTTTCAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTGAAAGTTTGAAGTCAGTTTAGGCTATATGAGCTGTTTCAAAA  350

seq1  AAATAAAACTAAAATAAAAAAATTTTTTAAAAAGAGAGAGGAAGGAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAACTAAAATAAAAAAATTTTTTAAAAAGAGAGAGGAAGGAAGGA  400

seq1  GAAAAAAAAAGAGGGACTTGGGAGGTGAGTGGAGGAGTGAGTTGAGGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAAGAGGGACTTGGGAGGTGAGTGGAGGAGTGAGTTGAGGTGG  450

seq1  CG  452
      ||
seq2  CG  452