BAC Information

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BAC

Clone NameB6Ng01-237I10
Chromosome3 (Build37)
Map Location 44,137,123 - 44,138,114
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039264
Downstream geneLOC676484, LOC100039296
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-237I10.bB6Ng01-237I10.g
ACCGA048459GA048460
length987995
definitionB6Ng01-237I10.b B6Ng01-237I10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttatctctgtatcccactcccaccaatggacaggtcatt
gaaatagaaattaaacatagactcagtgaaattaacagaagttatgaaac
aaaaacacttaacaggtatctatagaaaatttcaccctaaaacaaaagaa
tataccttcttctcagcacctcattttaccttttccaatattgaaaatat
aatcagtcacaaaacaaacctcagcagatagaagaagattgaaataatcg
catgcattctatcagatcaccacagactaaggctagatttcaataagaac
aaaaacaacaaaaaaacaactatgatcaatgatatctggtcagggcagaa
acaaagaaaaaaaatcaaagactatagaattaaatgaaaatgaagacaca
gtatacccaaacgcatggaacacaaaaaaagtaatgctaagaggaaaatt
catagcagtaagtaactttataaagattggagaggtcctacagttgggac
ttaacagactacctgaaagctctagaatggaaagaagcacacccaagtgg
agtaaactgcaataaatatacaaactcagcgctaaaatcaccaaattagt
aacaaagataatgatataaagaatcaccaaaactaagagctgttcttttt
tttgagaaaatcaacaagatagataaatgcttctccaaaataacctaagg
gcacggaaacagtatccagataaacaaaatcagaaatgaaaaaagagaca
ttacaacacaaatggaggaatttcaaaaaatcatcacaagttactacaaa
aaaactgtactcaacaaaactggaaaatatataagaaatgggggattgtc
tgagcagattctatatgccaagattaaattaagaccagataatctatcaa
aagagtctcataattcctaaagaaatagaggtaatcattaaaaaaaaaaa
aaatctcccaaccaagaaagactaggccagattcttt
gaattcctaaatattttattcccaaacatctctcagtttgttttttctca
tttattctatttacactttcaggtcttatatgtttttattcatctctttc
ctcttttttttttttttttgttcatcagttttattaacaaatttaaaata
ttgcttgatttgataatgaggagaaatgaatgtactgtatcttatttgaa
acatattaaggactataagaattaattaaacaaatgattatgaatgaata
tgataaaagcagaaaaaccaaatattagactataaaagacttcagtttgc
atccatatcttttggtccaattataatatcattaacattatacacacaca
cacacacacacacacacacacacacacacacaatatatatatatattccc
atgcaaattctttgacataaaccaaaatctttgttgaggtacatcttaag
atttacaatccaatttttctaaagtttatactgcccaatgagattcaatg
tacaagagaatatttcacaaagtagaaggaggagcctaggttaatgaata
tttgtttttatttttatagattttttataaacgatgcgtttgtttccttt
tttaacagcatgtatcatatccataaaggcttttgaaaagtcatttgctt
gtacataagctatgttggaatattcatgaccttctctcatagagttgctg
gctttttatggagacatagtgtctcggctgttattatagtttttcccttc
cttccttccttccttccttacttccttcccttccttcctttctttctttc
tttctttctttctttctttctttcctatttggtgttgtcaaatcatctga
gattcacaaatgttgtaaatctaggtgctaatatctgtttccagtctttg
ctcggttactgtttgtgccttgggtttcatttcatttcctctctgggttc
ttagtaagatgggatgtggttgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_44137123_44138114
seq2: B6Ng01-237I10.g_66_1060 (reverse)

seq1  ACACACACACACACACACACACACAACCACAT-CCATCTCTACTAAGAA-  48
      |||||||||||||||||||||||||||||||| |||||| ||||||||| 
seq2  ACACACACACACACACACACACACAACCACATCCCATCT-TACTAAGAAC  49

seq1  CCAGAGAGGAAATGAAATGAAA-CCAAGGCACAAAACAGTAACCGAGCAA  97
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  CCAGAGAGGAAATGAAATGAAACCCAAGGCAC-AAACAGTAACCGAGCAA  98

seq1  AGACTGG-AACAGATATTAGCACCTAGATTTACAACATTTGTGAATCTCA  146
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGAAACAGATATTAGCACCTAGATTTACAACATTTGTGAATCTCA  148

seq1  GATGATTTGACAACACCAAATAGGAAAGAAAGAAAGAAAGAAAGAAAGAA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTTGACAACACCAAATAGGAAAGAAAGAAAGAAAGAAAGAAAGAA  198

seq1  AGAAAGAAAGGAAGGAA-GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAA  245
      ||||||||||||||||| ||||||||| ||||||||||||||||||||||
seq2  AGAAAGAAAGGAAGGAAGGGAAGGAAGTAAGGAAGGAAGGAAGGAAGGAA  248

seq1  GGGAAAAACTATAATAACAGCCGAGACACTATGTCTCCATAAAAAGCCAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAACTATAATAACAGCCGAGACACTATGTCTCCATAAAAAGCCAG  298

seq1  CAACTCTATGAGAGAAGGTCATGAATATTCCAACATAGCTTATGTACAAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTATGAGAGAAGGTCATGAATATTCCAACATAGCTTATGTACAAG  348

seq1  CAAATGACTTTTCAAAAGCCTTTATGGATATGATACATGCTGTTAAAAAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGACTTTTCAAAAGCCTTTATGGATATGATACATGCTGTTAAAAAA  398

seq1  GGAAACAAACGCATCGTTTATAAAAAATCTATAAAAATAAAAACAAATAT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAACGCATCGTTTATAAAAAATCTATAAAAATAAAAACAAATAT  448

seq1  TCATTAACCTAGGCTCCTCCTTCTACTTTGTGAAATATTCTCTTGTACAT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAACCTAGGCTCCTCCTTCTACTTTGTGAAATATTCTCTTGTACAT  498

seq1  TGAATCTCATTGGGCAGTATAAACTTTAGAAAAATTGGATTGTAAATCTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTCATTGGGCAGTATAAACTTTAGAAAAATTGGATTGTAAATCTT  548

seq1  AAGATGTACCTCAACAAAGATTTTGGTTTATGTCAAAGAATTTGCATGGG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTACCTCAACAAAGATTTTGGTTTATGTCAAAGAATTTGCATGGG  598

seq1  AATATATATATATATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATATATATATTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  648

seq1  GTGTGTATAATGTTAATGATATTATAATTGGACCAAAAGATATGGATGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATAATGTTAATGATATTATAATTGGACCAAAAGATATGGATGCA  698

seq1  AACTGAAGTCTTTTATAGTCTAATATTTGGTTTTTCTGCTTTTATCATAT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGTCTTTTATAGTCTAATATTTGGTTTTTCTGCTTTTATCATAT  748

seq1  TCATTCATAATCATTTGTTTAATTAATTCTTATAGTCCTTAATATGTTTC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATAATCATTTGTTTAATTAATTCTTATAGTCCTTAATATGTTTC  798

seq1  AAATAAGATACAGTACATTCATTTCTCCTCATTATCAAATCAAGCAATAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGATACAGTACATTCATTTCTCCTCATTATCAAATCAAGCAATAT  848

seq1  TTTAAATTTGTTAATAAAACTGATGAACAAAAAAAAAAAAAAAAGAGGAA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTGTTAATAAAACTGATGAACAAAAAAAAAAAAAAAAGAGGAA  898

seq1  AGAGATGAATAAAAACATATAAGACCTGAAAGTGTAAATAGAATAAATGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATGAATAAAAACATATAAGACCTGAAAGTGTAAATAGAATAAATGA  948

seq1  GAAAAAACAAACTGAGAGATGTTTGGGAATAAAATATTTAGGAATTC  992
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAACAAACTGAGAGATGTTTGGGAATAAAATATTTAGGAATTC  995